| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g10441 | 1:16,089,752-16,095,971 | + | C2H1g29027 | CX1g000284 | LOC_Os01g31360 | Os01g0498200 | - | Detail |
| C1H1g08067 | 1:16,131,645-16,131,908 | - | C2H1g10406 | CX1g003239 | LOC_Os02g53860 | Os01g0702300 | - | Detail |
| C1H1g19933 | 1:16,131,950-16,132,486 | - | - | CX1g006103 | - | - | - | Detail |
| C1H1g02507 | 1:16,186,136-16,194,080 | - | C2H1g27470 | CX1g006952 | LOC_Os01g31470 | Os01g0499300 | - | Detail |
| C1H1g30690 | 1:16,202,153-16,206,030 | - | - | - | LOC_Os01g31494 | - | - | Detail |
| C1H1g06507 | 1:16,232,177-16,234,893 | + | - | CX1g003470 | LOC_Os10g12140 | - | - | Detail |
| C1H1g29343 | 1:16,254,135-16,262,299 | - | C2H1g12094 | CX1g003784 | LOC_Os01g31580 | Os01g0500500 | - | Detail |
| C1H1g22299 | 1:16,262,449-16,263,455 | + | - | - | - | - | - | Detail |
| C1H1g00827 | 1:16,265,064-16,266,593 | - | - | - | - | - | - | Detail |
| C1H1g25673 | 1:16,280,410-16,285,559 | + | C2H1g04216 | CX1g001244 | - | Os01g0531200 | - | Detail |
| C1H1g15828 | 1:16,286,887-16,287,519 | + | C2H1g24200 | - | - | - | - | Detail |
| C1H1g26169 | 1:16,291,534-16,296,030 | + | - | CX1g006932 | LOC_Os01g31610 | Os01g0500900 | - | Detail |
| C1H1g02546 | 1:16,298,476-16,302,520 | - | C2H1g16802 | CX1g004477 | LOC_Os01g31629 | Os01g0501000 | - | Detail |
| C1H1g29880 | 1:16,303,654-16,304,694 | - | C2H1g16802 | CX1g004477 | LOC_Os01g31629 | Os01g0501000 | - | Detail |
| C1H1g24088 | 1:16,312,907-16,313,210 | - | C2H1g06157 | - | LOC_Os01g31670 | - | - | Detail |
| C1H1g12098 | 1:16,333,742-16,338,873 | - | C2H1g01470 | CX1g007019 | LOC_Os01g31680 | Os01g0501700 | OsTATC | Detail |
| C1H1g01980 | 1:16,342,887-16,344,316 | + | C2H1g01635 | CX1g000224 | LOC_Os01g31690 | Os01g0501800 | - | Detail |
| C1H1g18830 | 1:16,365,340-16,372,622 | + | C2H1g04118 | CX1g003789 | LOC_Os01g31760 | Os01g0502300 | - | Detail |
| C1H1g06929 | 1:16,399,018-16,408,581 | + | C2H1g07307 | CX1g004837 | LOC_Os01g31770 | Os01g0502400 | - | Detail |
| C1H1g23293 | 1:16,434,330-16,436,518 | - | C2H1g27591 | CX1g002538 | LOC_Os01g31810 | Os01g0502800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016027 | 12:1,672,320-1,673,432 | - | C1H11g26745 | C2H11g29740 | LOC_Os12g04230 | Os12g0137000 | - | Detail |
| CX12g015114 | 12:1,676,446-1,676,700 | + | - | - | - | - | - | Detail |
| CX12g016318 | 12:1,677,350-1,680,093 | - | C1H12g30611 | C2H12g16637 | LOC_Os12g04240 | Os12g0137100 | - | Detail |
| CX12g018417 | 12:1,684,367-1,687,895 | + | C1H12g30370 | C2H12g14263 | LOC_Os12g04260 | Os12g0137200 | - | Detail |
| CX12g016382 | 12:1,688,685-1,691,780 | - | C1H12g23515 | C2H12g25110 | LOC_Os12g04270 | Os12g0137300 | - | Detail |
| CX12g015056 | 12:1,699,400-1,703,234 | + | C1H12g19285 | C2H12g13621 | LOC_Os12g04290 | Os12g0137500 | - | Detail |
| CX12g017342 | 12:1,703,901-1,704,899 | - | C1H12g17056 | C2H12g09638 | LOC_Os12g04300 | Os12g0137600 | - | Detail |
| CX12g015660 | 12:1,706,089-1,707,105 | - | C1H12g06551 | C2H12g09638 | LOC_Os12g04320 | Os12g0137700 | - | Detail |
| CX12g016430 | 12:1,712,550-1,713,566 | - | C1H12g06551 | C2H12g02518 | LOC_Os12g04350 | Os12g0137700 | - | Detail |
| CX12g015111 | 12:1,719,848-1,721,694 | - | C1H12g16466 | - | LOC_Os12g05700 | Os12g0597300 | - | Detail |
| CX12g016838 | 12:1,723,761-1,723,952 | - | - | - | - | - | - | Detail |
| CX12g015173 | 12:1,724,261-1,724,470 | + | - | - | - | - | - | Detail |
| CX12g015181 | 12:1,728,299-1,733,790 | - | C1H12g18257 | C2H12g08235 | LOC_Os12g04370 | Os12g0138100 | - | Detail |
| CX12g016946 | 12:1,742,648-1,744,174 | - | C1H12g18257 | C2H12g12918 | LOC_Os12g04380 | Os12g0138200 | - | Detail |
| CX12g017048 | 12:1,748,957-1,751,405 | + | C1H12g03320 | C2H12g06655 | LOC_Os12g04410 | Os12g0138500 | OsBOP3, NH5 | Detail |
| CX12g015145 | 12:1,762,027-1,763,530 | + | C1H12g02118 | C2H12g17026 | LOC_Os12g04424 | Os12g0138800 | - | Detail |
| CX12g016675 | 12:1,764,949-1,766,614 | + | C1H12g08849 | C2H12g16805 | LOC_Os12g04424 | Os12g0138800 | - | Detail |
| CX12g018579 | 12:1,767,731-1,773,164 | + | C1H12g04455 | C2H12g26667 | LOC_Os12g04440 | Os12g0138900 | - | Detail |
| CX12g018280 | 12:1,779,366-1,780,638 | + | C1H12g26225 | C2H12g06048 | LOC_Os12g04460 | Os12g0139100 | - | Detail |
| CX12g016143 | 12:1,789,180-1,792,636 | - | C1H12g06694 | C2H12g06757 | LOC_Os12g04480 | Os12g0139300 | OsCPD2, CYP90A4, OsCPD2/CYP90A4 | Detail |