| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g03370 | 2:20,500,130-20,501,561 | + | C1H2g26519 | CX2g024727 | LOC_Os02g36285 | Os02g0570400 | OsDTC1, OsKSL3 | Detail |
| C2H2g08598 | 2:20,526,537-20,529,407 | + | C1H2g27996 | CX2g019614 | LOC_Os02g36150 | Os02g0570500 | - | Detail |
| C2H2g05039 | 2:20,533,465-20,536,049 | - | C1H2g01402 | CX2g023226 | LOC_Os02g36190 | Os02g0570700 | - | Detail |
| C2H2g24869 | 2:20,576,137-20,577,813 | - | - | - | LOC_Os09g27734 | - | - | Detail |
| C2H2g17098 | 2:20,587,097-20,591,340 | + | C1H2g07162 | CX2g021593 | LOC_Os02g36210 | Os02g0571100 | OsCPS2, Os-CPS2, OsCyc2, OsCPS2ent | Detail |
| C2H2g28683 | 2:20,591,947-20,593,508 | + | C1H2g07162 | CX2g021593 | LOC_Os02g36210 | Os02g0571100 | OsCPS2, Os-CPS2, OsCyc2, OsCPS2ent | Detail |
| C2H2g13289 | 2:20,599,954-20,602,598 | - | C1H2g03952 | CX2g021871 | LOC_Os02g36220 | Os02g0571300 | OsKSL7 | Detail |
| C2H2g08650 | 2:20,605,548-20,607,139 | - | C1H2g03952 | CX2g021871 | LOC_Os02g36220 | Os02g0571300 | OsKSL7 | Detail |
| C2H2g08973 | 2:20,608,206-20,609,564 | - | - | - | - | - | - | Detail |
| C2H2g07065 | 2:20,621,490-20,623,110 | - | C1H2g22902 | CX2g021871 | LOC_Os02g36264 | Os02g0571800 | OsKSL9 | Detail |
| C2H2g09109 | 2:20,626,203-20,629,889 | - | C1H2g02826 | CX2g021871 | LOC_Os02g36264 | Os02g0571800 | OsKSL9 | Detail |
| C2H2g15028 | 2:20,635,878-20,639,875 | - | C1H2g09017 | CX2g024086 | LOC_Os02g36280 | Os02g0571900 | - | Detail |
| C2H2g16141 | 2:20,648,025-20,648,882 | + | C1H2g18768 | CX2g024727 | LOC_Os02g36285 | Os02g0572050 | - | Detail |
| C2H2g09753 | 2:20,655,604-20,656,650 | - | C1H2g17745 | CX2g018873 | LOC_Os02g36320 | Os02g0572300 | - | Detail |
| C2H2g01273 | 2:20,658,486-20,658,890 | - | C1H2g12070 | - | - | Os02g0572300 | - | Detail |
| C2H2g16620 | 2:20,663,417-20,670,683 | - | C1H2g26185 | CX2g023356 | LOC_Os02g36340 | Os02g0572400 | - | Detail |
| C2H2g00545 | 2:20,686,435-20,687,808 | - | C1H2g25932 | CX2g023112 | LOC_Os02g36350 | Os02g0572600 | - | Detail |
| C2H2g01996 | 2:20,697,379-20,700,730 | - | C1H2g10452 | CX2g023654 | LOC_Os02g36360 | Os02g0572900 | - | Detail |
| C2H2g05333 | 2:20,718,744-20,722,543 | + | C1H2g13546 | CX2g018889 | LOC_Os02g36380 | Os02g0573200 | OsCRY1a, OsCRY1, CRY1a, CRY2 | Detail |
| C2H2g01642 | 2:20,723,188-20,728,600 | - | C1H2g14408 | CX2g019460 | LOC_Os02g36390 | Os02g0573300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016235 | 12:1,408,290-1,408,923 | - | C1H12g05970 | C2H12g21923 | LOC_Os11g03920 | Os12g0131266 | - | Detail |
| CX12g015993 | 12:1,410,744-1,415,172 | - | C1H12g22049 | C2H12g04882 | LOC_Os12g03790 | Os12g0131900 | - | Detail |
| CX12g015231 | 12:1,427,695-1,431,183 | + | C1H12g27375 | C2H12g26793 | LOC_Os12g03810 | Os12g0132200 | - | Detail |
| CX12g016449 | 12:1,431,627-1,432,479 | - | C1H12g17838 | C2H12g09084 | LOC_Os12g03816 | Os12g0132300 | OsCML3 | Detail |
| CX12g016015 | 12:1,433,565-1,437,646 | - | C1H12g18740 | C2H12g06878 | LOC_Os12g03822 | Os12g0132400 | OsRIP1 | Detail |
| CX12g015235 | 12:1,438,453-1,438,834 | - | C1H12g16357 | C2H12g15683 | - | - | - | Detail |
| CX12g017917 | 12:1,439,784-1,440,898 | + | C1H11g04490 | C2H11g08675 | LOC_Os11g04000 | Os11g0134600 | - | Detail |
| CX12g016155 | 12:1,442,400-1,445,833 | - | C1H12g00495 | C2H12g06293 | LOC_Os12g02050 | Os12g0500800 | - | Detail |
| CX12g016345 | 12:1,446,965-1,447,984 | - | C1H12g00495 | - | LOC_Os11g04010 | Os11g0134700 | OsMC7 | Detail |
| CX12g017829 | 12:1,447,116-1,447,724 | + | - | - | - | - | - | Detail |
| CX12g018506 | 12:1,506,413-1,510,584 | + | C1H12g02841 | C2H12g04214 | LOC_Os12g03920 | Os12g0518200 | OsDUF6 | Detail |
| CX12g017220 | 12:1,523,159-1,523,464 | + | - | - | - | - | - | Detail |
| CX12g015267 | 12:1,525,416-1,526,728 | + | C1H12g27817 | C2H12g30444 | LOC_Os12g03960 | Os12g0133400 | - | Detail |
| CX12g018659 | 12:1,527,445-1,529,581 | + | C1H12g15237 | C2H12g10222 | LOC_Os12g03970 | Os12g0133500 | OsCPK26 | Detail |
| CX12g015288 | 12:1,531,239-1,531,436 | - | C1H12g29110 | C2H12g11861 | LOC_Os12g03980 | Os12g0133600 | - | Detail |
| CX12g017140 | 12:1,532,242-1,534,495 | - | C1H12g04680 | C2H12g22177 | LOC_Os12g03990 | Os12g0133700 | - | Detail |
| CX12g018385 | 12:1,537,772-1,537,957 | + | - | - | - | - | - | Detail |
| CX12g018350 | 12:1,538,318-1,541,337 | - | C1H12g21432 | C2H12g11358 | LOC_Os12g04000 | Os12g0133800 | OsPIN1d | Detail |
| CX12g018483 | 12:1,543,583-1,543,774 | - | - | - | - | - | - | Detail |
| CX12g016532 | 12:1,544,324-1,544,497 | - | - | - | - | Os02g0188201 | - | Detail |