| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g09325 | 4:1,638,294-1,640,327 | - | C2H4g29753 | CX4g036540 | LOC_Os04g04060 | Os04g0129900 | - | Detail |
| C1H4g24046 | 4:1,641,510-1,642,004 | - | - | CX4g032974 | LOC_Os04g04070 | Os04g0130433 | - | Detail |
| C1H4g10673 | 4:1,656,966-1,658,423 | + | - | CX4g034537 | LOC_Os04g04100 | - | - | Detail |
| C1H4g20023 | 4:1,719,955-1,720,560 | + | C2H4g04395 | - | LOC_Os04g04230 | Os04g0131800 | - | Detail |
| C1H4g20239 | 4:1,722,093-1,729,360 | - | C2H4g01852 | CX4g034087 | LOC_Os04g04254 | Os04g0131900 | CTB2 | Detail |
| C1H4g25848 | 4:1,737,417-1,749,711 | - | C2H4g01852 | CX4g034087 | LOC_Os04g04254 | Os04g0131900 | CTB2 | Detail |
| C1H4g18623 | 4:1,753,592-1,753,955 | - | C2H4g06971 | CX4g034087 | LOC_Os04g04254 | Os04g0131900 | CTB2 | Detail |
| C1H4g04462 | 4:1,762,452-1,768,721 | + | C2H4g08446 | CX4g033436 | LOC_Os04g04320 | Os04g0132300 | - | Detail |
| C1H4g17799 | 4:1,778,796-1,783,507 | + | C2H4g30640 | CX4g036248 | LOC_Os04g04330 | Os04g0132500 | CTB4a, OsRLCK127, RLCK127 | Detail |
| C1H4g19447 | 4:1,799,060-1,799,641 | - | C2H4g19144 | CX4g034832 | - | - | - | Detail |
| C1H4g14310 | 4:1,806,840-1,807,794 | - | - | CX4g034477 | - | - | - | Detail |
| C1H4g23533 | 4:1,832,950-1,836,850 | + | C2H4g05610 | CX4g032097 | LOC_Os04g04750 | Os04g0134800 | - | Detail |
| C1H4g07028 | 4:1,861,368-1,870,740 | + | C2H4g08696 | CX4g032198 | LOC_Os04g05470 | Os04g0125700 | - | Detail |
| C1H4g23122 | 4:1,908,961-1,909,862 | + | C2H4g09916 | CX4g034389 | LOC_Os04g04690 | Os04g0123800 | - | Detail |
| C1H4g13170 | 4:1,915,132-1,916,706 | + | C2H4g08696 | CX4g035554 | LOC_Os04g05470 | Os04g0125700 | - | Detail |
| C1H4g11470 | 4:1,927,614-1,933,541 | - | C2H4g11644 | CX2g022606 | LOC_Os04g04950 | Os04g0136200 | - | Detail |
| C1H4g23677 | 4:1,939,940-1,940,300 | - | C2H4g00094 | CX4g033097 | LOC_Os12g23430 | - | - | Detail |
| C1H4g22739 | 4:1,940,890-1,942,034 | - | C2H4g14390 | CX4g033097 | LOC_Os12g23400 | - | - | Detail |
| C1H4g01991 | 4:1,945,350-1,946,200 | - | - | - | - | - | - | Detail |
| C1H4g23277 | 4:1,948,307-1,950,580 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016598 | 12:1,256,966-1,258,480 | - | C1H11g05437 | - | LOC_Os11g03700 | Os12g0128450 | - | Detail |
| CX12g015617 | 12:1,260,367-1,262,057 | - | C1H11g16996 | C2H12g18508 | LOC_Os11g03710 | Os12g0128600 | - | Detail |
| CX12g018226 | 12:1,264,655-1,270,787 | + | C1H12g26301 | C2H12g13215 | LOC_Os12g03470 | Os12g0128700 | - | Detail |
| CX12g017648 | 12:1,272,255-1,279,261 | + | C1H12g04649 | C2H12g05300 | LOC_Os12g03480 | Os12g0128800 | - | Detail |
| CX12g017010 | 12:1,283,893-1,284,615 | - | C1H12g06620 | C2H12g14416 | LOC_Os12g03500 | Os12g0129000 | - | Detail |
| CX12g015154 | 12:1,287,747-1,288,316 | - | C1H12g01649 | C2H12g19737 | LOC_Os12g03510 | Os12g0129100 | OsPMEI45 | Detail |
| CX12g015665 | 12:1,289,508-1,297,838 | + | C1H12g02679 | C2H12g11596 | LOC_Os12g03480 | Os12g0129350 | - | Detail |
| CX12g018471 | 12:1,298,330-1,302,458 | - | C1H12g29448 | C2H12g12992 | LOC_Os12g03540 | Os12g0131300 | - | Detail |
| CX12g017457 | 12:1,307,873-1,316,404 | + | C1H12g23198 | C2H12g02522 | LOC_Os12g03554 | Os12g0129550 | - | Detail |
| CX12g015546 | 12:1,340,005-1,341,396 | + | C1H12g09231 | C2H12g00295 | LOC_Os12g03594 | Os12g0129700 | - | Detail |
| CX12g015691 | 12:1,345,713-1,348,031 | + | C1H12g05463 | C2H12g18228 | LOC_Os12g03594 | Os12g0129700 | - | Detail |
| CX12g015059 | 12:1,351,976-1,355,440 | - | C1H12g17444 | C2H12g16455 | LOC_Os12g03750 | Os12g0131701 | - | Detail |
| CX12g018100 | 12:1,356,021-1,358,855 | + | C1H12g22988 | C2H12g18228 | LOC_Os12g03740 | Os12g0131400 | - | Detail |
| CX12g018070 | 12:1,362,357-1,364,807 | + | C1H12g07287 | C2H12g12005 | LOC_Os12g03640 | Os12g0130200 | SDRLK-8 | Detail |
| CX12g016590 | 12:1,367,132-1,369,636 | - | C1H12g07287 | C2H12g12005 | LOC_Os12g03650 | Os12g0130300 | SDRLK-57 | Detail |
| CX12g018507 | 12:1,383,085-1,385,607 | - | C1H12g07287 | C2H12g12005 | LOC_Os12g03670 | Os12g0130500 | SDRLP-6 | Detail |
| CX12g016757 | 12:1,389,488-1,391,974 | - | C1H12g07287 | C2H12g12005 | LOC_Os12g03690 | Os12g0130800 | SDK3 | Detail |
| CX12g015570 | 12:1,395,045-1,395,869 | + | C1H11g08572 | C2H11g04308 | LOC_Os12g03710 | Os12g0131000 | - | Detail |
| CX12g017965 | 12:1,396,946-1,401,994 | - | C1H12g09635 | C2H12g15851 | LOC_Os12g03720 | Os12g0131150 | - | Detail |
| CX12g017842 | 12:1,404,924-1,407,749 | + | C1H12g19116 | C2H12g29504 | LOC_Os12g03730 | Os12g0131200 | - | Detail |