| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g09287 | 3:30,222,920-30,226,256 | + | C1H3g31065 | CX3g027455 | LOC_Os03g58070 | Os03g0794900 | - | Detail |
| C2H3g10350 | 3:30,226,916-30,232,292 | - | C1H3g14917 | CX3g025789 | LOC_Os03g58080 | Os03g0795000 | - | Detail |
| C2H3g14214 | 3:30,233,192-30,235,132 | - | C1H3g21726 | CX7g047050 | LOC_Os03g58090 | Os03g0795100 | - | Detail |
| C2H3g03262 | 3:30,245,918-30,247,592 | - | C1H3g19476 | CX3g026410 | LOC_Os03g58110 | Os03g0795300 | - | Detail |
| C2H3g27733 | 3:30,259,067-30,262,461 | + | C1H3g15891 | CX3g026673 | LOC_Os03g58130 | Os03g0795500 | - | Detail |
| C2H3g00892 | 3:30,262,622-30,262,816 | - | C1H3g05639 | CX3g029982 | LOC_Os03g58140 | Os03g0795600 | - | Detail |
| C2H3g03004 | 3:30,263,080-30,264,677 | - | C1H3g08848 | CX3g029982 | LOC_Os03g58140 | Os03g0795600 | - | Detail |
| C2H3g02014 | 3:30,266,840-30,269,177 | - | C1H3g16443 | CX3g025433 | LOC_Os03g58150 | Os03g0795800 | - | Detail |
| C2H3g19484 | 3:30,269,440-30,272,649 | + | C1H3g00668 | CX3g029604 | LOC_Os03g58160 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |
| C2H3g13882 | 3:30,280,144-30,280,849 | + | C1H3g17982 | - | - | Os03g0796000 | - | Detail |
| C2H3g08936 | 3:30,283,988-30,285,708 | + | C1H3g06155 | CX3g029140 | LOC_Os03g58170 | Os03g0744600 | - | Detail |
| C2H3g19170 | 3:30,304,548-30,305,166 | - | C1H3g22799 | CX3g029920 | LOC_Os03g58180 | Os03g0796301 | - | Detail |
| C2H3g21611 | 3:30,305,852-30,307,169 | - | C1H3g12446 | CX3g028585 | LOC_Os03g58190 | Os03g0796400 | - | Detail |
| C2H3g18356 | 3:30,310,527-30,312,904 | - | C1H3g01827 | CX3g026109 | LOC_Os03g58204 | Os03g0796501 | - | Detail |
| C2H3g26421 | 3:30,322,906-30,323,582 | - | - | CX7g047542 | - | - | - | Detail |
| C2H3g24067 | 3:30,325,529-30,328,397 | + | C1H3g31311 | CX3g026507 | - | - | - | Detail |
| C2H3g06838 | 3:30,342,946-30,345,210 | + | C1H3g10470 | CX3g027699 | LOC_Os03g58230 | Os03g0796600 | OsDUF50605 | Detail |
| C2H3g07985 | 3:30,356,260-30,362,517 | + | C1H3g27596 | CX3g028795 | LOC_Os03g58240 | Os03g0796800 | - | Detail |
| C2H3g15466 | 3:30,362,875-30,367,218 | - | C1H3g15009 | CX3g028970 | LOC_Os03g58250 | Os03g0796900 | REB, OsZIP33, RISBZ2, OsbZIP33 | Detail |
| C2H3g10564 | 3:30,370,146-30,373,999 | - | C1H3g17969 | CX3g025677 | LOC_Os03g58260 | Os03g0797000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002448 | 1:7,059,233-7,060,225 | + | C1H1g22711 | C2H1g22442 | LOC_Os01g13880 | Os01g0302900 | - | Detail |
| CX1g003506 | 1:7,069,611-7,070,814 | + | C1H1g13790 | C2H1g01439 | LOC_Os01g13930 | Os01g0241000 | - | Detail |
| CX1g001602 | 1:7,072,554-7,076,486 | - | C1H1g16293 | C2H1g00102 | LOC_Os01g13940 | Os01g0241100 | - | Detail |
| CX1g002010 | 1:7,081,037-7,081,258 | - | - | C2H1g18536 | - | - | - | Detail |
| CX1g002619 | 1:7,082,833-7,083,255 | + | - | C2H1g22273 | LOC_Os01g13950 | Os01g0241400 | PHS9 | Detail |
| CX1g000413 | 1:7,097,303-7,098,870 | + | C1H1g01093 | C2H1g07537 | LOC_Os01g14010 | Os01g0242200 | - | Detail |
| CX1g001627 | 1:7,102,051-7,104,677 | + | C1H1g03627 | C2H1g23925 | LOC_Os01g14020 | Os01g0242300 | - | Detail |
| CX1g006563 | 1:7,105,751-7,106,503 | + | - | C2H1g16233 | LOC_Os01g14030 | Os01g0242400 | - | Detail |
| CX1g002990 | 1:7,107,199-7,109,004 | - | C1H1g31589 | C2H1g27390 | LOC_Os01g14040 | Os01g0242500 | - | Detail |
| CX1g001173 | 1:7,111,407-7,116,721 | - | C1H1g24637 | C2H1g18566 | LOC_Os01g14050 | Os01g0242600 | - | Detail |
| CX1g006070 | 1:7,120,393-7,121,674 | + | C1H1g21695 | C2H1g05181 | LOC_Os01g14070 | Os01g0242900 | - | Detail |
| CX1g002725 | 1:7,124,414-7,126,345 | - | C1H1g07595 | C2H1g29594 | LOC_Os01g14080 | Os01g0243000 | - | Detail |
| CX1g006119 | 1:7,129,097-7,137,436 | + | C1H1g05434 | C2H1g03298 | LOC_Os01g14090 | Os01g0243100 | - | Detail |
| CX1g001271 | 1:7,138,785-7,143,544 | - | C1H1g06150 | C2H1g23199 | LOC_Os01g14100 | Os01g0243200 | - | Detail |
| CX1g001985 | 1:7,144,036-7,144,206 | - | - | - | - | - | - | Detail |
| CX1g001593 | 1:7,146,306-7,147,043 | - | - | C2H1g12539 | LOC_Os01g14110 | Os01g0243400 | OsFIF3 | Detail |
| CX1g005084 | 1:7,170,259-7,170,933 | - | C1H1g06722 | C2H1g18066 | LOC_Os01g14130 | Os01g0243600 | - | Detail |
| CX1g006064 | 1:7,171,692-7,172,857 | - | C1H1g15302 | C2H1g24885 | LOC_Os01g14140 | Os01g0243700 | - | Detail |
| CX1g004224 | 1:7,185,533-7,187,546 | + | C1H1g22514 | C2H1g08657 | LOC_Os01g18480 | - | - | Detail |
| CX1g003769 | 1:7,232,906-7,234,152 | + | C1H1g25297 | C2H1g14773 | LOC_Os01g14330 | Os01g0245600 | - | Detail |