| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g05410 | 3:2,813,014-2,821,309 | + | C1H3g11682 | CX3g027922 | LOC_Os03g06510 | Os03g0161100 | - | Detail |
| C2H3g11481 | 3:2,821,809-2,827,231 | - | C1H3g12948 | CX3g029615 | LOC_Os03g06520 | Os03g0161200 | - | Detail |
| C2H3g04338 | 3:2,839,593-2,841,892 | + | C1H3g19950 | CX3g031150 | LOC_Os03g06570 | Os03g0161400 | - | Detail |
| C2H3g04897 | 3:2,849,650-2,852,046 | + | C1H3g16884 | CX3g029485 | LOC_Os03g06580 | Os03g0161500 | - | Detail |
| C2H3g20671 | 3:2,857,405-2,857,866 | - | C1H3g31680 | CX3g029738 | LOC_Os03g06610 | Os03g0161600 | OsEPFL6 | Detail |
| C2H3g16543 | 3:2,873,484-2,875,711 | + | C1H3g19723 | CX3g029835 | LOC_Os03g06620 | Os03g0161800 | - | Detail |
| C2H3g18983 | 3:2,877,424-2,879,447 | + | C1H3g17239 | CX3g029527 | LOC_Os03g06630 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |
| C2H3g18594 | 3:2,887,211-2,888,499 | + | - | - | - | - | - | Detail |
| C2H3g18217 | 3:2,889,436-2,891,957 | + | C1H3g19807 | CX3g030288 | LOC_Os03g06654 | Os03g0162000 | COW1, OsCOW1, oscow1, OsYUC8, NAL7, OsYUCCA8, FMO, OsFMO(t) | Detail |
| C2H3g01853 | 3:2,903,303-2,903,873 | + | C1H3g07386 | CX3g030521 | LOC_Os03g06670 | Os03g0162200 | - | Detail |
| C2H3g21314 | 3:2,911,394-2,912,892 | + | C1H3g24759 | CX3g025819 | LOC_Os03g06680 | Os03g0162500 | OsDUF50604 | Detail |
| C2H3g14410 | 3:2,930,448-2,934,898 | + | C1H3g16348 | CX3g029826 | LOC_Os03g06705 | Os03g0162800 | - | Detail |
| C2H3g28634 | 3:2,935,603-2,936,034 | + | C1H3g31273 | - | - | - | - | Detail |
| C2H3g14053 | 3:2,936,052-2,938,523 | + | C1H3g16422 | CX3g027686 | LOC_Os03g06710 | Os03g0162900 | - | Detail |
| C2H3g03063 | 3:2,941,941-2,943,677 | + | C1H3g04672 | - | - | Os03g0163000 | - | Detail |
| C2H3g15393 | 3:2,944,725-2,952,303 | + | C1H3g10390 | CX3g025042 | LOC_Os03g06720 | Os03g0163100 | - | Detail |
| C2H3g06714 | 3:2,952,491-2,953,976 | + | C1H3g23541 | CX3g025042 | LOC_Os03g06730 | Os03g0163200 | - | Detail |
| C2H3g22693 | 3:2,954,872-2,959,579 | + | C1H3g17347 | CX3g026090 | LOC_Os03g06740 | Os03g0163300 | - | Detail |
| C2H3g01887 | 3:2,960,166-2,961,935 | - | C1H3g06657 | CX3g029299 | LOC_Os03g06750 | Os03g0163400 | - | Detail |
| C2H3g29355 | 3:2,964,329-2,966,695 | + | C1H3g03297 | CX3g026455 | LOC_Os03g06760 | Os03g0163500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g018065 | 12:602,870-605,938 | - | C1H12g21687 | C2H12g12409 | LOC_Os12g02120 | Os12g0112500 | - | Detail |
| CX12g016418 | 12:606,661-606,915 | + | C1H12g24303 | C2H12g22341 | LOC_Os12g05151 | - | - | Detail |
| CX12g017281 | 12:609,819-614,775 | + | C1H12g10573 | C2H12g21007 | LOC_Os12g02130 | Os12g0112600 | - | Detail |
| CX12g016942 | 12:618,268-619,931 | + | C1H12g21697 | C2H12g15227 | LOC_Os12g02150 | Os12g0112800 | - | Detail |
| CX12g017359 | 12:627,927-629,222 | - | C1H12g27375 | C2H12g26793 | LOC_Os12g02200 | Os12g0113500 | CIPK14, OsCIPK14 | Detail |
| CX12g016492 | 12:643,212-644,480 | + | C1H12g19599 | C2H12g25203 | LOC_Os12g02230 | Os12g0113900 | - | Detail |
| CX12g016640 | 12:652,169-652,465 | + | C1H11g01076 | C2H11g19119 | LOC_Os12g02240 | Os12g0114000 | - | Detail |
| CX12g018666 | 12:653,701-659,071 | - | C1H12g09257 | C2H12g01364 | LOC_Os12g02250 | Os12g0114100 | - | Detail |
| CX12g018689 | 12:666,011-672,662 | - | C1H12g19945 | C2H12g25278 | LOC_Os12g02260 | Os12g0114200 | - | Detail |
| CX12g016723 | 12:673,223-674,797 | + | C1H12g21815 | C2H12g21149 | LOC_Os12g02280 | Os12g0114400 | - | Detail |
| CX12g015227 | 12:725,015-726,201 | - | C1H12g16682 | C2H12g29120 | LOC_Os12g02370 | Os12g0115700 | OsCHIL2 | Detail |
| CX12g018356 | 12:731,008-732,363 | + | C1H12g13992 | C2H12g30415 | LOC_Os12g02380 | Os12g0115900 | - | Detail |
| CX12g017180 | 12:733,036-736,455 | - | C1H12g30342 | C2H12g22137 | LOC_Os12g02385 | Os12g0115950 | - | Detail |
| CX12g018009 | 12:736,470-737,000 | - | C1H11g01957 | C2H12g22137 | - | Os12g0115950 | - | Detail |
| CX12g015514 | 12:737,508-741,629 | - | C1H12g11893 | C2H12g22137 | LOC_Os12g02390 | Os12g0116000 | - | Detail |
| CX12g015559 | 12:788,549-791,239 | - | C1H12g18259 | C2H12g24474 | LOC_Os12g02490 | Os11g0117700 | - | Detail |
| CX12g015723 | 12:796,432-797,562 | + | C1H12g22137 | C2H12g05739 | LOC_Os12g02500 | Os12g0117100 | - | Detail |
| CX12g017747 | 12:800,555-802,528 | - | C1H12g13059 | C2H12g16005 | LOC_Os12g02520 | Os12g0117300 | - | Detail |
| CX12g017873 | 12:806,955-808,958 | - | C1H12g12088 | C2H12g19349 | LOC_Os12g02530 | Os12g0117400 | - | Detail |
| CX12g017776 | 12:810,393-810,767 | + | - | - | - | - | - | Detail |