| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g12416 | 1:31,702,167-31,706,617 | - | C2H1g03973 | CX1g000146 | LOC_Os01g61760 | Os01g0834100 | - | Detail |
| C1H1g06212 | 1:31,710,480-31,721,299 | + | C2H1g25411 | CX1g002696 | LOC_Os01g61780 | Os01g0834200 | - | Detail |
| C1H1g30061 | 1:31,728,722-31,730,161 | - | C2H1g11057 | CX1g000392 | LOC_Os01g61810 | Os01g0834400 | HAP3A, OsHAP3A, OsNF-YB-2, NFYB2 | Detail |
| C1H1g07712 | 1:31,731,952-31,736,728 | - | C2H1g10042 | CX1g001710 | LOC_Os01g61814 | Os01g0834600 | - | Detail |
| C1H1g15578 | 1:31,739,248-31,743,641 | + | C2H1g11754 | CX1g001115 | LOC_Os01g61830 | Os01g0834700 | - | Detail |
| C1H1g28438 | 1:31,746,927-31,747,166 | - | C2H1g04024 | CX1g005583 | LOC_Os01g61840 | Os01g0834800 | - | Detail |
| C1H1g29053 | 1:31,755,807-31,765,030 | - | C2H1g07677 | CX1g004964 | LOC_Os01g61860 | Os01g0835000 | - | Detail |
| C1H1g14368 | 1:31,780,490-31,785,814 | + | C2H1g02343 | CX1g001158 | LOC_Os01g61880 | Os01g0835500 | - | Detail |
| C1H1g23056 | 1:31,796,546-31,797,747 | - | C2H1g27745 | CX1g000977 | LOC_Os01g61900 | Os01g0835700 | OsCCT01 | Detail |
| C1H1g04133 | 1:31,802,050-31,805,363 | - | C2H1g21602 | CX1g007240 | LOC_Os01g61910 | Os01g0835800 | - | Detail |
| C1H1g21523 | 1:31,809,401-31,809,712 | + | C2H5g09767 | CX5g040997 | LOC_Os01g61920 | Os01g0835900 | - | Detail |
| C1H1g12123 | 1:31,814,530-31,824,148 | + | C2H1g29300 | CX1g000993 | LOC_Os01g61930 | Os05g0462600 | - | Detail |
| C1H1g13267 | 1:31,831,536-31,833,788 | + | C2H1g27556 | CX1g006810 | LOC_Os01g61940 | Os01g0836600 | OsABCG3 | Detail |
| C1H1g04982 | 1:31,839,610-31,840,164 | - | C2H1g15144 | - | LOC_Os01g61950 | - | - | Detail |
| C1H1g15863 | 1:31,841,733-31,842,944 | - | C2H1g29885 | CX1g001966 | LOC_Os01g61960 | Os01g0836700 | - | Detail |
| C1H1g03833 | 1:31,844,908-31,846,257 | - | C2H1g29885 | CX1g004021 | LOC_Os01g61970 | Os01g0836800 | - | Detail |
| C1H1g17938 | 1:31,849,282-31,849,788 | + | - | - | - | - | - | Detail |
| C1H1g23659 | 1:31,855,439-31,856,533 | + | - | CX1g000026 | LOC_Os01g61980 | Os01g0836900 | - | Detail |
| C1H1g22081 | 1:31,859,405-31,862,509 | - | C2H1g06537 | CX1g004745 | LOC_Os01g61990 | Os01g0837000 | - | Detail |
| C1H1g08351 | 1:31,864,744-31,866,551 | + | C2H1g25983 | CX1g000248 | LOC_Os01g62000 | Os01g0837100 | OsPLL2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g015478 | 12:191,092-198,918 | + | C1H12g08323 | C2H12g29309 | LOC_Os12g01230 | Os12g0102900 | - | Detail |
| CX12g018700 | 12:202,107-204,540 | + | C1H12g16522 | C2H12g09673 | LOC_Os12g01250 | Os12g0103150 | - | Detail |
| CX12g017122 | 12:206,373-210,747 | - | C1H12g30443 | C2H12g06286 | LOC_Os12g01240 | Os12g0103000 | - | Detail |
| CX12g017647 | 12:227,348-230,324 | + | C1H12g16522 | C2H12g09673 | LOC_Os12g01250 | Os12g0103150 | - | Detail |
| CX12g016817 | 12:238,220-238,537 | - | C1H12g19965 | C2H12g24516 | LOC_Os12g01260 | Os12g0103300 | - | Detail |
| CX12g016699 | 12:242,277-244,027 | + | C1H12g07971 | C2H12g09673 | LOC_Os12g01350 | Os12g0103150 | - | Detail |
| CX12g018098 | 12:246,280-247,563 | + | C1H12g00720 | C2H12g09673 | LOC_Os12g01350 | Os12g0104200 | - | Detail |
| CX12g015572 | 12:267,237-272,074 | + | C1H12g07188 | C2H12g24208 | LOC_Os12g01360 | Os12g0104300 | - | Detail |
| CX12g015174 | 12:273,209-276,500 | - | C1H12g08293 | C2H12g07052 | LOC_Os12g01370 | Os12g0104400 | - | Detail |
| CX12g017889 | 12:288,934-292,936 | + | C1H12g04111 | C2H12g00110 | LOC_Os12g01380 | Os12g0104700 | - | Detail |
| CX12g015577 | 12:295,889-305,598 | + | C1H12g25419 | C2H12g02913 | LOC_Os12g01390 | Os12g0104800 | - | Detail |
| CX12g015907 | 12:306,862-307,227 | - | C1H12g17838 | C2H12g08204 | LOC_Os12g01400 | Os12g0104900 | - | Detail |
| CX12g016366 | 12:316,304-319,016 | + | C1H12g08170 | C2H12g08249 | LOC_Os12g01410 | Os12g0193800 | - | Detail |
| CX12g017835 | 12:319,417-323,994 | - | C1H12g09737 | C2H12g14287 | LOC_Os12g01420 | Os12g0105200 | - | Detail |
| CX12g016242 | 12:325,213-329,276 | - | C1H12g16869 | C2H12g09075 | LOC_Os12g01449 | Os12g0105300 | - | Detail |
| CX12g018810 | 12:330,638-332,188 | - | C1H12g27735 | C2H12g18999 | LOC_Os12g01480 | Os12g0105500 | - | Detail |
| CX12g016184 | 12:337,931-339,570 | - | C1H12g29981 | C2H12g08640 | LOC_Os12g01490 | Os12g0105600 | - | Detail |
| CX12g016806 | 12:344,014-346,717 | - | C1H12g20885 | C2H12g28214 | LOC_Os12g01500 | Os12g0105700 | - | Detail |
| CX12g015379 | 12:348,426-350,985 | - | C1H12g31185 | C2H12g22083 | LOC_Os12g01510 | Os12g0105800 | - | Detail |
| CX12g017303 | 12:354,562-360,297 | - | C1H12g11678 | C2H12g23521 | LOC_Os12g01520 | Os12g0105950 | - | Detail |