| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g20432 | 3:23,585,037-23,588,691 | - | C1H3g21434 | CX3g028229 | LOC_Os03g45210 | Os03g0654700 | - | Detail |
| C2H3g04155 | 3:23,600,729-23,602,681 | + | C1H3g03001 | CX3g030222 | LOC_Os03g45250 | Os03g0655100 | - | Detail |
| C2H3g05571 | 3:23,607,056-23,610,583 | - | C1H3g21386 | CX3g026925 | LOC_Os03g45260 | Os03g0655200 | - | Detail |
| C2H3g24615 | 3:23,610,990-23,614,658 | + | C1H3g23268 | CX3g028778 | LOC_Os03g45270 | Os03g0655300 | - | Detail |
| C2H3g23456 | 3:23,631,773-23,638,477 | + | C1H3g00444 | CX3g028152 | LOC_Os03g45300 | Os03g0655600 | - | Detail |
| C2H3g28256 | 3:23,640,616-23,644,779 | + | C1H3g21969 | CX3g025231 | LOC_Os03g45320 | Os03g0655700 | - | Detail |
| C2H3g14608 | 3:23,647,676-23,649,311 | - | C1H3g09602 | CX3g027791 | LOC_Os03g45330 | Os03g0656000 | - | Detail |
| C2H3g05055 | 3:23,651,160-23,651,465 | - | C1H3g03391 | CX3g027791 | LOC_Os03g45330 | - | - | Detail |
| C2H3g02509 | 3:23,654,640-23,655,636 | - | C1H3g13910 | CX3g027133 | LOC_Os03g45340 | Os03g0656100 | - | Detail |
| C2H3g14304 | 3:23,656,680-23,658,768 | - | C1H3g27575 | CX3g025575 | LOC_Os03g45344 | Os03g0656201 | - | Detail |
| C2H3g22997 | 3:23,667,639-23,668,233 | - | C1H3g27714 | - | - | - | - | Detail |
| C2H3g22826 | 3:23,668,285-23,668,893 | - | C1H3g10858 | - | - | - | - | Detail |
| C2H3g19499 | 3:23,678,293-23,680,818 | + | C1H3g06767 | CX3g026686 | LOC_Os03g45390 | Os03g0656800 | - | Detail |
| C2H3g07189 | 3:23,681,103-23,684,844 | + | C1H3g05969 | CX3g028225 | LOC_Os03g45400 | Os03g0656900 | NUS1, V1, V<sub>1</sub> | Detail |
| C2H3g10811 | 3:23,686,607-23,690,057 | + | C1H3g09225 | CX3g030227 | LOC_Os03g45410 | Os03g0657000 | OsTBP2 | Detail |
| C2H3g07935 | 3:23,690,699-23,693,833 | - | C1H3g18850 | CX3g030290 | LOC_Os03g45420 | Os03g0657100 | - | Detail |
| C2H3g03419 | 3:23,703,230-23,703,742 | - | C1H3g02435 | CX3g029382 | LOC_Os03g45450 | Os03g0657400 | - | Detail |
| C2H3g15251 | 3:23,720,428-23,724,470 | - | C1H3g24167 | CX3g028666 | LOC_Os03g45619 | Os03g0658800 | - | Detail |
| C2H3g22074 | 3:23,725,391-23,727,032 | - | C1H3g24167 | CX3g028381 | LOC_Os03g45519 | Os03g0658000 | - | Detail |
| C2H3g00755 | 3:23,727,908-23,728,816 | - | C1H3g12006 | CX3g028666 | LOC_Os03g45519 | Os03g0658000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016457 | 12:59,254-60,755 | - | C1H11g11120 | C2H12g28928 | LOC_Os11g01010 | - | - | Detail |
| CX12g015584 | 12:60,893-63,419 | + | C1H12g25928 | C2H12g27338 | LOC_Os12g01010 | Os12g0100100 | - | Detail |
| CX12g015048 | 12:63,808-66,780 | - | C1H12g18793 | C2H12g08992 | LOC_Os12g01020 | Os12g0100200 | - | Detail |
| CX12g018146 | 12:68,947-69,456 | + | - | - | - | - | - | Detail |
| CX12g016135 | 12:72,844-74,160 | - | C1H12g06062 | C2H12g02041 | LOC_Os12g01030 | Os12g0100500 | - | Detail |
| CX12g016762 | 12:83,029-84,528 | - | C1H12g29219 | C2H12g08720 | LOC_Os12g01040 | Os12g0100700 | OsEXO70H3 | Detail |
| CX12g016373 | 12:90,230-97,399 | + | C1H12g18361 | C2H12g25359 | LOC_Os12g01060 | Os12g0101000 | OsRpp30-L | Detail |
| CX12g018648 | 12:116,076-116,681 | + | C1H11g18239 | C2H12g09125 | LOC_Os12g01120 | Os12g0101600 | WOX3, OsWOX3, OsNS, OsPRS | Detail |
| CX12g016432 | 12:129,081-129,257 | - | - | - | - | Os07g0616100 | - | Detail |
| CX12g015600 | 12:132,437-141,851 | + | C1H12g12488 | C2H12g20048 | LOC_Os12g01140 | Os12g0101800 | OsNPH1a, OsPHOT1b | Detail |
| CX12g018624 | 12:142,519-142,929 | - | C1H11g26777 | C2H11g23847 | - | - | - | Detail |
| CX12g016657 | 12:144,096-144,443 | + | C1H11g18261 | - | LOC_Os12g01150 | - | - | Detail |
| CX12g018399 | 12:145,715-148,039 | + | C1H12g09986 | C2H12g15714 | LOC_Os12g01160 | Os12g0102100 | - | Detail |
| CX12g017181 | 12:149,332-152,199 | + | C1H12g25436 | C2H12g02013 | LOC_Os12g01170 | Os12g0102200 | - | Detail |
| CX12g015666 | 12:153,649-154,629 | - | C1H12g20644 | C2H12g29482 | LOC_Os12g01180 | Os12g0102300 | - | Detail |
| CX12g018802 | 12:155,835-156,575 | - | C1H12g27413 | C2H12g29482 | LOC_Os12g01180 | Os12g0102350 | - | Detail |
| CX12g017806 | 12:159,527-165,515 | + | C1H12g28474 | C2H12g07971 | LOC_Os12g01190 | Os12g0102400 | OsRINGC2-2 | Detail |
| CX12g018387 | 12:166,639-173,367 | - | C1H12g06345 | C2H12g27539 | LOC_Os12g01200 | Os12g0102500 | - | Detail |
| CX12g018791 | 12:182,734-185,389 | + | C1H12g01531 | C2H12g00217 | LOC_Os12g01210 | Os12g0102600 | - | Detail |
| CX12g016067 | 12:186,093-190,298 | - | C1H12g22834 | C2H12g27482 | LOC_Os12g01220 | Os12g0102700 | - | Detail |