| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g27777 | 1:26,903,577-26,904,881 | + | C2H1g14542 | CX1g000877 | LOC_Os01g52380 | Os01g0721800 | - | Detail |
| C1H1g16429 | 1:26,907,034-26,909,887 | - | C2H1g03938 | CX1g001695 | LOC_Os01g52390 | Os01g0721900 | - | Detail |
| C1H1g19540 | 1:26,913,451-26,917,004 | + | C2H1g29212 | CX1g005554 | LOC_Os01g52400 | Os01g0722100 | - | Detail |
| C1H1g14417 | 1:26,925,623-26,927,295 | + | C2H1g15644 | CX1g004391 | LOC_Os01g52410 | Os01g0722300 | Os2R_MYB14 | Detail |
| C1H1g17552 | 1:26,938,467-26,942,242 | + | C2H1g14945 | CX1g002677 | LOC_Os01g52450 | Os01g0722700 | OsHXK9 | Detail |
| C1H1g17968 | 1:26,946,286-26,949,083 | - | C2H1g16107 | CX1g001570 | LOC_Os01g52470 | Os01g0723000 | - | Detail |
| C1H1g22223 | 1:26,951,203-26,952,076 | + | C2H1g09375 | CX1g004088 | LOC_Os01g52480 | Os01g0723100 | - | Detail |
| C1H1g00329 | 1:26,952,184-26,952,905 | + | C2H1g00796 | CX1g004088 | LOC_Os01g52480 | Os01g0723100 | - | Detail |
| C1H1g27397 | 1:26,953,685-26,955,175 | - | C2H1g00282 | CX1g004240 | LOC_Os01g52490 | Os01g0723200 | - | Detail |
| C1H1g18013 | 1:26,962,480-26,968,150 | + | C2H1g25823 | CX1g001850 | LOC_Os01g52500 | Os01g0723400 | NADP-ME2, Os-NADP-ME2, Os-NADP-ME2-2 | Detail |
| C1H1g17264 | 1:26,969,834-26,975,477 | + | C2H1g08871 | CX1g003519 | LOC_Os01g52514 | Os01g0723500 | - | Detail |
| C1H1g03740 | 1:26,976,986-26,981,316 | + | C2H1g17638 | CX1g004209 | LOC_Os01g52530 | Os01g0723600 | - | Detail |
| C1H1g09315 | 1:26,983,980-26,987,890 | + | C2H1g22241 | CX1g004680 | LOC_Os01g52540 | Os01g0723700 | - | Detail |
| C1H1g17060 | 1:26,988,103-26,994,535 | - | C2H1g23039 | CX1g004575 | LOC_Os01g52550 | Os01g0723800 | - | Detail |
| C1H1g18463 | 1:27,012,831-27,022,129 | + | C2H1g05862 | CX1g004747 | LOC_Os01g52560 | Os01g0724500 | - | Detail |
| C1H1g09116 | 1:27,038,700-27,046,564 | + | C2H1g26023 | CX1g002347 | LOC_Os01g52610 | Os01g0725400 | - | Detail |
| C1H1g01881 | 1:27,047,370-27,050,594 | + | C2H1g19762 | CX1g003740 | LOC_Os01g52630 | Os01g0725600 | - | Detail |
| C1H1g28016 | 1:27,055,008-27,060,104 | + | C2H1g12468 | CX1g000922 | LOC_Os01g52640 | Os01g0725800 | - | Detail |
| C1H1g01009 | 1:27,060,442-27,061,041 | - | C2H1g25269 | CX1g004829 | LOC_Os01g52650 | Os01g0725900 | - | Detail |
| C1H1g26602 | 1:27,063,887-27,064,616 | - | C2H1g28455 | CX1g001737 | LOC_Os01g52660 | Os01g0726100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g012039 | 11:22,944,217-22,946,670 | - | C1H11g16937 | C2H11g14906 | LOC_Os11g43390 | Os11g0654800 | - | Detail |
| CX11g014480 | 11:22,949,311-22,949,575 | + | C1H11g14205 | C2H2g13315 | LOC_Os11g43404 | Os11g0655000 | - | Detail |
| CX11g014568 | 11:22,956,576-22,959,323 | + | C1H11g04321 | C2H11g12306 | LOC_Os11g43410 | Os11g0655200 | - | Detail |
| CX11g014522 | 11:22,975,216-22,975,488 | + | C1H11g29284 | C2H11g16271 | LOC_Os11g43490 | - | - | Detail |
| CX11g013058 | 11:22,976,745-22,978,019 | - | C1H11g04321 | C2H11g14996 | LOC_Os11g43500 | Os11g0655700 | - | Detail |
| CX11g012387 | 11:22,978,427-22,983,490 | + | C1H11g25162 | C2H11g27033 | LOC_Os11g43510 | Os11g0655800 | - | Detail |
| CX11g013655 | 11:22,992,932-22,995,791 | + | C1H11g28807 | C2H11g19542 | LOC_Os11g43570 | Os11g0599400 | - | Detail |
| CX11g011631 | 11:23,005,711-23,010,534 | + | C1H11g13650 | C2H11g24153 | LOC_Os11g43590 | Os11g0657000 | - | Detail |
| CX11g011080 | 11:23,011,000-23,014,524 | + | C1H11g06947 | C2H11g05429 | LOC_Os11g43600 | Os11g0657100 | - | Detail |
| CX11g014634 | 11:23,015,533-23,017,000 | - | C1H11g31018 | C2H11g06950 | LOC_Os11g43610 | Os11g0657200 | - | Detail |
| CX11g012531 | 11:23,018,054-23,019,065 | + | C1H11g13451 | C2H11g26337 | LOC_Os11g43620 | Os11g0657300 | - | Detail |
| CX11g012696 | 11:23,020,619-23,023,411 | - | - | C2H11g06588 | LOC_Os11g43640 | Os11g0657400 | OsPEX1 | Detail |
| CX11g014316 | 11:23,028,008-23,028,955 | + | C1H11g11178 | - | LOC_Os11g43780 | Os11g0672600 | - | Detail |
| CX11g013750 | 11:23,033,006-23,038,300 | - | C1H11g21860 | C2H11g20964 | LOC_Os11g43700 | Os11g0657900 | RYMV3 | Detail |
| CX11g014011 | 11:23,056,207-23,056,371 | + | - | - | - | - | - | Detail |
| CX11g013087 | 11:23,061,890-23,065,258 | + | C1H11g13158 | C2H11g26290 | - | - | - | Detail |
| CX11g014410 | 11:23,076,337-23,076,495 | - | - | - | - | Os02g0184100 | - | Detail |
| CX11g011519 | 11:23,088,233-23,091,788 | + | C1H11g11705 | C2H11g14074 | LOC_Os11g43740 | Os11g0658700 | MADS68, OsMADS68 | Detail |
| CX11g012897 | 11:23,094,123-23,097,600 | - | C1H11g02191 | C2H11g17023 | LOC_Os11g43750 | Os11g0658800 | - | Detail |
| CX11g013289 | 11:23,105,090-23,106,186 | - | - | - | LOC_Os11g31220 | - | - | Detail |