| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g23946 | 5:24,298,161-24,299,642 | + | C2H5g15674 | - | LOC_Os05g51650 | Os05g0594900 | - | Detail |
| C1H5g07547 | 5:24,299,970-24,300,566 | - | C2H5g18619 | CX5g039507 | LOC_Os05g51660 | Os05g0595000 | - | Detail |
| C1H5g22966 | 5:24,306,790-24,310,218 | + | C2H5g04566 | CX5g037190 | LOC_Os05g51670 | Os05g0595100 | OsUGE1, OsUGE-1, UGE1, UGE-1, BP1 | Detail |
| C1H5g29705 | 5:24,314,276-24,338,423 | + | C2H5g00689 | CX5g037572 | LOC_Os05g51690 | Os05g0595300 | CRCT, NRR, NRRa | Detail |
| C1H5g17200 | 5:24,314,364-24,315,098 | - | C2H5g03425 | CX5g039657 | LOC_Os05g51680 | Os05g0595200 | - | Detail |
| C1H5g10995 | 5:24,338,704-24,341,533 | - | C2H5g25216 | CX5g038125 | LOC_Os05g51700 | Os05g0595400 | - | Detail |
| C1H5g27674 | 5:24,342,371-24,344,469 | - | C2H5g14814 | CX5g041076 | LOC_Os05g51710 | Os05g0595500 | - | Detail |
| C1H5g24835 | 5:24,350,690-24,354,556 | - | C2H5g23094 | CX5g037161 | LOC_Os05g51740 | Os05g0595800 | - | Detail |
| C1H5g11204 | 5:24,357,393-24,357,937 | - | C2H5g15029 | CX5g037472 | LOC_Os05g45954 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| C1H5g19628 | 5:24,359,119-24,360,738 | + | C2H5g10878 | CX5g037109 | LOC_Os05g51750 | Os05g0596000 | - | Detail |
| C1H5g15344 | 5:24,362,940-24,363,852 | - | C2H5g03677 | CX5g040213 | LOC_Os05g51754 | Os05g0596200 | - | Detail |
| C1H5g05425 | 5:24,370,389-24,371,543 | + | C2H5g02505 | CX5g038377 | LOC_Os05g51780 | Os05g0596500 | - | Detail |
| C1H5g04142 | 5:24,380,267-24,392,932 | - | C2H5g19295 | CX5g038266 | LOC_Os05g51790 | Os05g0596600 | OsSMC5 | Detail |
| C1H5g09886 | 5:24,394,335-24,397,839 | + | C2H5g24076 | CX5g040422 | LOC_Os05g51800 | Os05g0596700 | - | Detail |
| C1H5g06124 | 5:24,399,765-24,400,578 | + | C2H5g17322 | CX5g039358 | LOC_Os05g51820 | Os05g0597000 | OsMUTE | Detail |
| C1H5g15760 | 5:24,403,463-24,406,171 | - | C2H5g24478 | CX5g038345 | LOC_Os05g51830 | Os05g0597100 | HDT1, OsHDT1, HDT701 | Detail |
| C1H5g16210 | 5:24,406,864-24,410,928 | - | C2H5g14678 | CX5g038501 | LOC_Os05g51850 | Os05g0597200 | - | Detail |
| C1H5g10848 | 5:24,413,074-24,414,807 | + | C2H5g20513 | CX5g040358 | LOC_Os05g51860 | Os05g0597400 | - | Detail |
| C1H5g07885 | 5:24,443,447-24,443,701 | - | C2H5g12335 | CX5g039366 | LOC_Os05g51900 | Os05g0597700 | - | Detail |
| C1H6g09491 | 6:33,828-40,991 | + | C2H6g15066 | CX6g041728 | LOC_Os06g01170 | Os06g0101000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g012967 | 11:22,309,989-22,310,440 | + | C1H11g18860 | C2H11g04701 | - | - | - | Detail |
| CX11g013852 | 11:22,310,552-22,313,945 | + | C1H5g15494 | - | LOC_Os03g33570 | Os03g0448500 | - | Detail |
| CX11g011263 | 11:22,314,156-22,314,401 | + | - | - | - | - | - | Detail |
| CX11g010978 | 11:22,315,977-22,316,351 | + | - | - | - | - | - | Detail |
| CX11g014601 | 11:22,319,540-22,319,722 | - | - | - | - | - | - | Detail |
| CX11g013576 | 11:22,328,223-22,329,863 | + | C1H11g03199 | C2H11g04023 | LOC_Os11g42100 | Os11g0640800 | - | Detail |
| CX11g014890 | 11:22,347,198-22,352,380 | + | C1H11g31489 | C2H11g22122 | LOC_Os11g42160 | Os11g0641200 | - | Detail |
| CX11g012894 | 11:22,353,139-22,353,822 | + | - | C2H11g08010 | LOC_Os11g42170 | Os11g0641300 | - | Detail |
| CX11g013233 | 11:22,360,977-22,363,035 | + | C1H11g11828 | C2H11g05210 | LOC_Os11g42200 | Os11g0641500 | - | Detail |
| CX11g013023 | 11:22,368,428-22,370,217 | + | C1H11g11828 | C2H11g17959 | LOC_Os11g42220 | Os11g0641800 | - | Detail |
| CX11g011796 | 11:22,373,764-22,378,475 | - | C1H11g23391 | C2H11g20053 | LOC_Os11g42240 | Os11g0642100 | - | Detail |
| CX11g011540 | 11:22,397,204-22,401,299 | + | C1H11g00192 | C2H11g21762 | LOC_Os11g42350 | Os11g0642800 | OsGS1 | Detail |
| CX11g011335 | 11:22,404,600-22,405,937 | + | C1H11g17447 | C2H11g23668 | LOC_Os11g42370 | Os11g0643100 | Os-TBT2 | Detail |
| CX11g014026 | 11:22,406,467-22,406,706 | + | - | - | - | - | - | Detail |
| CX11g011778 | 11:22,416,998-22,423,243 | + | C1H11g13177 | C2H11g08403 | LOC_Os11g42390 | Os11g0643400 | - | Detail |
| CX11g013559 | 11:22,426,371-22,432,415 | + | C1H11g25435 | C2H11g06490 | LOC_Os11g42390 | Os11g0643400 | - | Detail |
| CX11g013796 | 11:22,440,128-22,440,457 | + | - | - | - | - | - | Detail |
| CX11g013351 | 11:22,444,023-22,444,997 | + | - | - | - | - | - | Detail |
| CX11g014939 | 11:22,445,699-22,453,933 | + | C1H11g01832 | C2H11g10226 | LOC_Os11g42420 | Os11g0643700 | - | Detail |
| CX11g013003 | 11:22,454,686-22,457,729 | - | C1H11g25144 | C2H11g15988 | LOC_Os11g42430 | Os11g0643800 | OsERD6 | Detail |