| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g12888 | 5:1,454,303-1,458,741 | + | C1H5g06409 | CX5g038529 | - | Os05g0575400 | - | Detail |
| C2H5g25220 | 5:1,466,544-1,467,068 | - | C1H5g14331 | CX5g038179 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| C2H5g24745 | 5:1,471,155-1,472,263 | - | C1H5g14331 | CX5g038179 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| C2H5g23667 | 5:1,478,681-1,480,492 | - | C1H5g16799 | - | - | - | - | Detail |
| C2H5g10940 | 5:1,485,921-1,486,759 | + | C1H5g11198 | CX5g037909 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| C2H5g13765 | 5:1,487,425-1,491,486 | - | C1H5g15292 | CX5g038918 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| C2H5g03241 | 5:1,493,234-1,494,460 | + | C1H3g03993 | CX5g037263 | LOC_Os12g34990 | Os03g0288300 | - | Detail |
| C2H5g20349 | 5:1,498,611-1,502,634 | + | C1H5g09306 | CX5g036768 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| C2H5g12419 | 5:1,520,537-1,521,252 | + | - | - | LOC_Os05g03960 | Os05g0130300 | - | Detail |
| C2H5g28718 | 5:1,521,612-1,529,770 | - | C1H5g31896 | CX5g040404 | LOC_Os05g03972 | Os05g0130400 | - | Detail |
| C2H5g08536 | 5:1,536,595-1,537,004 | - | C1H5g15210 | - | - | Os05g0130500 | - | Detail |
| C2H5g08634 | 5:1,538,539-1,539,316 | + | - | - | LOC_Os05g04000 | Os05g0130600 | - | Detail |
| C2H5g17204 | 5:1,541,642-1,546,148 | - | C1H5g13927 | CX5g040242 | LOC_Os05g04020 | Os05g0130400 | - | Detail |
| C2H5g23034 | 5:1,546,919-1,547,381 | + | C1H5g19982 | CX5g038388 | - | - | - | Detail |
| C2H5g10179 | 5:1,548,863-1,550,139 | + | C1H5g21167 | - | - | - | - | Detail |
| C2H5g12456 | 5:1,556,561-1,559,128 | - | C1H5g11003 | - | LOC_Os05g04070 | Os05g0131100 | - | Detail |
| C2H5g08847 | 5:1,561,924-1,566,163 | - | C1H5g23202 | - | LOC_Os05g04070 | Os05g0131401 | - | Detail |
| C2H5g12807 | 5:1,568,750-1,571,496 | - | C1H5g00064 | CX5g041042 | LOC_Os05g04120 | Os05g0131500 | - | Detail |
| C2H5g15022 | 5:1,573,614-1,581,468 | - | C1H5g06759 | CX5g037262 | - | - | - | Detail |
| C2H5g11311 | 5:1,588,305-1,591,921 | + | C1H5g22859 | CX5g040539 | LOC_Os05g04150 | Os05g0131900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004858 | 1:384,040-393,260 | + | C1H1g12709 | C2H1g09033 | LOC_Os01g01830 | Os01g0108200 | - | Detail |
| CX1g006268 | 1:401,277-401,922 | + | C1H1g08683 | C2H1g30343 | LOC_Os01g01840 | Os01g0108400 | - | Detail |
| CX1g002791 | 1:409,272-411,421 | + | C1H1g11414 | C2H1g23960 | LOC_Os01g01870 | Os01g0108600 | - | Detail |
| CX1g005800 | 1:415,347-417,317 | + | C1H1g06105 | C2H1g02003 | LOC_Os01g01890 | Os01g0108800 | - | Detail |
| CX1g006717 | 1:421,461-427,742 | + | C1H1g07324 | C2H1g26140 | LOC_Os01g01920 | Os01g0109300 | WFSL1, ST3, OsSAMHD1 | Detail |
| CX1g003141 | 1:428,815-429,549 | + | - | C2H1g08730 | LOC_Os01g01930 | - | - | Detail |
| CX1g002043 | 1:430,292-431,008 | + | C1H1g25672 | C2H1g04643 | LOC_Os01g01940 | Os01g0109500 | - | Detail |
| CX1g002189 | 1:434,027-442,512 | - | C1H1g19369 | C2H1g05030 | LOC_Os01g01960 | Os01g0109700 | - | Detail |
| CX1g007051 | 1:444,934-446,586 | - | C1H1g20420 | C2H1g22311 | LOC_Os01g01970 | Os01g0109750 | - | Detail |
| CX1g002825 | 1:459,517-459,840 | + | C1H2g18413 | C2H1g06720 | LOC_Os02g02460 | Os02g0116400 | - | Detail |
| CX1g002134 | 1:462,174-467,406 | + | C1H1g31250 | C2H1g21187 | LOC_Os01g02000 | Os01g0110100 | PHO1;1, OsPHO1;1 | Detail |
| CX1g005182 | 1:467,845-468,786 | - | C1H1g24670 | C2H1g20426 | - | Os01g0110200 | - | Detail |
| CX1g002536 | 1:471,244-474,404 | + | C1H1g18826 | C2H1g06307 | LOC_Os01g02020 | Os01g0110400 | - | Detail |
| CX1g006024 | 1:476,047-479,059 | - | C1H1g08982 | C2H1g08045 | LOC_Os01g02040 | Os01g0110500 | - | Detail |
| CX1g001649 | 1:478,236-479,069 | + | - | C2H1g03397 | - | Os01g0110600 | - | Detail |
| CX1g005092 | 1:485,205-494,731 | - | C1H1g18501 | C2H1g03511 | LOC_Os01g02050 | Os01g0110700 | - | Detail |
| CX1g001240 | 1:499,558-502,015 | - | C1H1g27492 | C2H1g15524 | LOC_Os01g02060 | Os01g0110800 | - | Detail |
| CX1g006065 | 1:507,609-508,178 | + | C1H1g19659 | C2H1g11966 | LOC_Os01g02070 | Os01g0111000 | OsPMEI1 | Detail |
| CX1g003369 | 1:508,411-509,533 | - | C1H1g17243 | C2H1g07695 | LOC_Os01g02080 | Os01g0111100 | - | Detail |
| CX1g001513 | 1:511,031-515,293 | + | C1H1g25488 | C2H1g07009 | LOC_Os01g02090 | Os01g0111200 | - | Detail |