| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g17037 | 6:25,998,476-25,999,487 | - | C2H6g17976 | CX6g043522 | LOC_Os06g49200 | Os06g0705500 | - | Detail |
| C1H6g06789 | 6:26,004,128-26,006,272 | + | C2H6g01709 | CX6g042299 | LOC_Os06g49210 | Os06g0705600 | - | Detail |
| C1H6g02632 | 6:26,010,222-26,012,560 | + | C2H6g20644 | CX6g045693 | LOC_Os06g49220 | Os06g0705700 | - | Detail |
| C1H6g03967 | 6:26,014,401-26,016,334 | + | C2H6g02964 | CX6g045693 | LOC_Os06g49230 | Os06g0706100 | - | Detail |
| C1H6g24113 | 6:26,016,399-26,017,202 | + | C2H6g07764 | CX6g045693 | LOC_Os06g49240 | Os06g0706100 | - | Detail |
| C1H6g07579 | 6:26,020,059-26,024,374 | + | C2H6g16936 | CX6g044738 | LOC_Os06g49250 | Os06g0706400 | OsPTR9 | Detail |
| C1H6g06492 | 6:26,028,504-26,032,588 | - | C2H6g22144 | CX6g043317 | LOC_Os06g49260 | Os06g0706600 | - | Detail |
| C1H6g17051 | 6:26,034,592-26,034,936 | - | - | CX6g045688 | LOC_Os06g49290 | Os06g0706700 | - | Detail |
| C1H6g14791 | 6:26,035,770-26,037,647 | - | C2H6g07496 | CX6g045701 | LOC_Os06g49300 | Os06g0707000 | XYXT1 | Detail |
| C1H6g07781 | 6:26,040,509-26,047,709 | + | C2H6g02584 | CX6g042851 | LOC_Os06g49310 | Os06g0707100 | - | Detail |
| C1H6g30332 | 6:26,047,531-26,049,525 | - | C2H6g28355 | CX6g044744 | LOC_Os06g49320 | Os06g0707200 | OsXAT4 | Detail |
| C1H6g13202 | 6:26,052,332-26,053,759 | - | - | CX6g043747 | LOC_Os06g49340 | Os06g0707300 | - | Detail |
| C1H6g20503 | 6:26,057,382-26,063,792 | - | C2H6g09646 | CX6g043432 | LOC_Os06g49360 | Os06g0707400 | - | Detail |
| C1H6g28571 | 6:26,074,403-26,078,854 | - | C2H6g12364 | CX6g043180 | LOC_Os06g49420 | Os06g0707700 | - | Detail |
| C1H6g18704 | 6:26,079,665-26,081,103 | - | C2H6g06456 | - | - | - | - | Detail |
| C1H6g17358 | 6:26,082,804-26,087,763 | + | C2H6g06263 | CX6g042732 | LOC_Os06g49430 | Os06g0708000 | BWMK1, OsBWMK1M | Detail |
| C1H6g07108 | 6:26,088,827-26,093,715 | - | C2H6g00786 | CX6g043918 | LOC_Os06g49440 | Os06g0708100 | - | Detail |
| C1H6g25506 | 6:26,094,009-26,100,445 | + | C2H6g22817 | CX6g041443 | LOC_Os06g49450 | Os06g0708200 | OsMTOPVIB | Detail |
| C1H6g16157 | 6:26,101,107-26,103,018 | + | C2H6g13876 | CX6g042713 | LOC_Os06g49460 | Os06g0708300 | - | Detail |
| C1H6g26774 | 6:26,103,935-26,105,851 | + | C2H6g01779 | CX6g043935 | LOC_Os06g49470 | Os06g0708400 | CYP19-4, OsCYP19-4, OsCYP-16, OsCYP19-3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004858 | 1:384,040-393,260 | + | C1H1g12709 | C2H1g09033 | LOC_Os01g01830 | Os01g0108200 | - | Detail |
| CX1g006268 | 1:401,277-401,922 | + | C1H1g08683 | C2H1g30343 | LOC_Os01g01840 | Os01g0108400 | - | Detail |
| CX1g002791 | 1:409,272-411,421 | + | C1H1g11414 | C2H1g23960 | LOC_Os01g01870 | Os01g0108600 | - | Detail |
| CX1g005800 | 1:415,347-417,317 | + | C1H1g06105 | C2H1g02003 | LOC_Os01g01890 | Os01g0108800 | - | Detail |
| CX1g006717 | 1:421,461-427,742 | + | C1H1g07324 | C2H1g26140 | LOC_Os01g01920 | Os01g0109300 | WFSL1, ST3, OsSAMHD1 | Detail |
| CX1g003141 | 1:428,815-429,549 | + | - | C2H1g08730 | LOC_Os01g01930 | - | - | Detail |
| CX1g002043 | 1:430,292-431,008 | + | C1H1g25672 | C2H1g04643 | LOC_Os01g01940 | Os01g0109500 | - | Detail |
| CX1g002189 | 1:434,027-442,512 | - | C1H1g19369 | C2H1g05030 | LOC_Os01g01960 | Os01g0109700 | - | Detail |
| CX1g007051 | 1:444,934-446,586 | - | C1H1g20420 | C2H1g22311 | LOC_Os01g01970 | Os01g0109750 | - | Detail |
| CX1g002825 | 1:459,517-459,840 | + | C1H2g18413 | C2H1g06720 | LOC_Os02g02460 | Os02g0116400 | - | Detail |
| CX1g002134 | 1:462,174-467,406 | + | C1H1g31250 | C2H1g21187 | LOC_Os01g02000 | Os01g0110100 | PHO1;1, OsPHO1;1 | Detail |
| CX1g005182 | 1:467,845-468,786 | - | C1H1g24670 | C2H1g20426 | - | Os01g0110200 | - | Detail |
| CX1g002536 | 1:471,244-474,404 | + | C1H1g18826 | C2H1g06307 | LOC_Os01g02020 | Os01g0110400 | - | Detail |
| CX1g006024 | 1:476,047-479,059 | - | C1H1g08982 | C2H1g08045 | LOC_Os01g02040 | Os01g0110500 | - | Detail |
| CX1g001649 | 1:478,236-479,069 | + | - | C2H1g03397 | - | Os01g0110600 | - | Detail |
| CX1g005092 | 1:485,205-494,731 | - | C1H1g18501 | C2H1g03511 | LOC_Os01g02050 | Os01g0110700 | - | Detail |
| CX1g001240 | 1:499,558-502,015 | - | C1H1g27492 | C2H1g15524 | LOC_Os01g02060 | Os01g0110800 | - | Detail |
| CX1g006065 | 1:507,609-508,178 | + | C1H1g19659 | C2H1g11966 | LOC_Os01g02070 | Os01g0111000 | OsPMEI1 | Detail |
| CX1g003369 | 1:508,411-509,533 | - | C1H1g17243 | C2H1g07695 | LOC_Os01g02080 | Os01g0111100 | - | Detail |
| CX1g001513 | 1:511,031-515,293 | + | C1H1g25488 | C2H1g07009 | LOC_Os01g02090 | Os01g0111200 | - | Detail |