| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g19272 | 2:27,849,076-27,852,729 | + | C1H2g11463 | CX2g018993 | LOC_Os02g49650 | Os02g0729100 | - | Detail |
| C2H2g16186 | 2:27,854,968-27,859,654 | - | C1H2g21451 | CX2g019218 | LOC_Os02g49660 | Os02g0729200 | OsXyBAT3 | Detail |
| C2H2g22569 | 2:27,860,660-27,862,575 | - | C1H2g10424 | CX2g021202 | LOC_Os02g49680 | Os02g0729400 | - | Detail |
| C2H2g11855 | 2:27,887,842-27,890,088 | + | C1H2g03384 | CX2g022732 | LOC_Os02g49700 | Os02g0729700 | - | Detail |
| C2H2g00897 | 2:27,889,197-27,889,803 | - | - | - | - | Os02g0729801 | - | Detail |
| C2H2g18750 | 2:27,898,773-27,899,249 | + | C1H2g20265 | CX2g022857 | LOC_Os02g49710 | Os02g0178600 | - | Detail |
| C2H2g28980 | 2:27,900,979-27,901,428 | + | C1H2g20265 | CX2g022857 | LOC_Os02g49710 | Os02g0730050 | - | Detail |
| C2H2g24627 | 2:27,901,473-27,905,014 | - | C1H2g00762 | CX2g024291 | LOC_Os02g49720 | Os02g0730000 | ALDH2a | Detail |
| C2H2g28834 | 2:27,906,714-27,910,518 | - | C1H2g11181 | CX2g024916 | LOC_Os02g49730 | Os02g0730100 | - | Detail |
| C2H2g02137 | 2:27,921,147-27,925,837 | + | C1H2g01906 | CX2g021108 | LOC_Os02g49760 | Os02g0730300 | - | Detail |
| C2H2g29055 | 2:27,929,980-27,934,008 | + | C1H2g17293 | CX2g020148 | LOC_Os02g49770 | Os02g0730400 | - | Detail |
| C2H2g02843 | 2:27,935,151-27,936,552 | - | C1H2g27973 | CX2g021412 | LOC_Os02g49780 | Os02g0730500 | - | Detail |
| C2H2g05336 | 2:27,937,669-27,940,170 | + | C1H2g19216 | CX2g024911 | LOC_Os02g49790 | Os02g0730600 | - | Detail |
| C2H2g23383 | 2:27,940,621-27,944,067 | - | C1H2g31196 | CX2g022531 | LOC_Os02g49800 | Os02g0730700 | - | Detail |
| C2H2g19263 | 2:27,946,330-27,949,427 | + | C1H2g13861 | CX2g023418 | LOC_Os02g49820 | Os02g0730800 | - | Detail |
| C2H2g25104 | 2:27,949,484-27,950,950 | - | C1H2g17305 | CX2g023390 | LOC_Os02g49830 | Os02g0730900 | - | Detail |
| C2H2g21462 | 2:27,962,063-27,968,137 | + | C1H2g08098 | CX2g022148 | LOC_Os02g49840 | Os02g0731200 | OsMADS57 | Detail |
| C2H2g03897 | 2:27,977,657-27,978,175 | + | C1H2g22689 | CX2g020726 | LOC_Os02g49850 | Os02g0731400 | - | Detail |
| C2H2g25341 | 2:27,978,834-27,979,767 | - | C1H2g07036 | CX2g021129 | LOC_Os02g49860 | Os02g0731500 | - | Detail |
| C2H2g19830 | 2:27,981,785-27,982,816 | + | C1H2g04869 | CX2g023460 | LOC_Os02g49870 | Os02g0731600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g011597 | 11:22,160,959-22,166,221 | - | C1H11g23330 | C2H11g26569 | LOC_Os11g41820 | Os11g0636900 | OsU2AF65A | Detail |
| CX11g014805 | 11:22,167,124-22,168,665 | - | C1H11g07280 | C2H11g12954 | LOC_Os11g41840 | Os11g0637100 | OsPLT11 | Detail |
| CX11g012689 | 11:22,173,703-22,175,321 | - | C1H11g20750 | C2H11g05836 | LOC_Os11g41840 | Os11g0637100 | OsPLT11 | Detail |
| CX11g014397 | 11:22,180,155-22,181,793 | - | C1H11g07280 | C2H11g26057 | LOC_Os11g41850 | Os11g0637200 | OsPLT12 | Detail |
| CX11g014218 | 11:22,185,281-22,186,913 | + | C1H11g04568 | C2H11g01232 | LOC_Os11g41860 | Os11g0637300 | - | Detail |
| CX11g013922 | 11:22,198,120-22,199,830 | + | C1H11g21328 | C2H11g01232 | LOC_Os11g41860 | Os11g0637300 | - | Detail |
| CX11g014541 | 11:22,201,654-22,203,176 | - | C1H11g28520 | C2H11g18143 | LOC_Os11g41870 | Os11g0637400 | OsPLT13 | Detail |
| CX11g012059 | 11:22,205,268-22,205,465 | - | C1H11g11924 | C2H11g25023 | LOC_Os11g41875 | Os11g0637501 | - | Detail |
| CX11g014677 | 11:22,207,819-22,209,789 | - | C1H11g11834 | C2H11g06094 | LOC_Os11g41880 | Os11g0637600 | - | Detail |
| CX11g013418 | 11:22,219,731-22,221,767 | + | C1H11g18437 | C2H11g23632 | LOC_Os11g41890 | Os11g0637700 | - | Detail |
| CX11g012671 | 11:22,227,016-22,232,716 | - | C1H11g02220 | C2H11g11167 | LOC_Os11g41900 | Os11g0637800 | OsLPAT2 | Detail |
| CX11g013667 | 11:22,232,640-22,233,026 | + | - | C2H11g12421 | - | Os11g0637900 | - | Detail |
| CX11g015032 | 11:22,238,116-22,244,032 | + | C1H11g07864 | C2H11g19429 | LOC_Os11g41910 | Os11g0638000 | - | Detail |
| CX11g010889 | 11:22,245,976-22,248,867 | + | C1H11g09334 | C2H11g03357 | LOC_Os11g41920 | Os11g0638200 | - | Detail |
| CX11g013312 | 11:22,258,551-22,259,033 | - | - | - | LOC_Os11g41950 | - | - | Detail |
| CX11g012224 | 11:22,265,358-22,280,168 | - | C1H11g30292 | C2H11g21824 | LOC_Os11g41990 | Os11g0638700 | - | Detail |
| CX11g013700 | 11:22,285,877-22,286,098 | - | - | - | - | - | - | Detail |
| CX11g011607 | 11:22,287,101-22,291,477 | + | C1H11g14461 | C2H11g03512 | LOC_Os11g42000 | Os11g0639000 | - | Detail |
| CX11g014851 | 11:22,292,457-22,295,603 | - | C1H11g01927 | C2H11g16299 | LOC_Os11g42010 | Os11g0639100 | Pi54, Pi-kh, Pi-k<sup>h</sup> | Detail |
| CX11g013493 | 11:22,300,532-22,303,014 | + | C1H11g03112 | C2H11g25522 | LOC_Os11g39230 | Os11g0534500 | - | Detail |