| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g00375 | 12:12,028,445-12,049,245 | - | C1H12g14155 | CX12g015869 | LOC_Os12g24170 | Os12g0429200 | - | Detail |
| C2H12g22470 | 12:12,079,801-12,080,399 | + | C1H12g03493 | CX12g018105 | - | Os12g0430900 | - | Detail |
| C2H12g14630 | 12:12,081,405-12,082,279 | + | C1H12g20362 | CX12g018105 | LOC_Os12g24240 | Os12g0430900 | - | Detail |
| C2H12g09366 | 12:12,082,630-12,096,521 | - | C1H12g01462 | CX12g016236 | LOC_Os12g24250 | Os12g0430000 | - | Detail |
| C2H12g04517 | 12:12,166,558-12,168,246 | + | C1H12g02746 | CX12g018132 | LOC_Os12g24320 | Os12g0431100 | - | Detail |
| C2H12g14972 | 12:12,184,433-12,186,723 | + | - | CX12g015770 | - | - | - | Detail |
| C2H12g16529 | 12:12,247,930-12,251,508 | + | C1H12g16885 | CX12g018511 | LOC_Os12g24390 | Os12g0431700 | - | Detail |
| C2H12g01862 | 12:12,255,102-12,256,070 | - | C1H12g31271 | CX12g015483 | LOC_Os12g24140 | Os12g0432000 | - | Detail |
| C2H12g16709 | 12:12,262,727-12,264,967 | + | - | CX12g017958 | LOC_Os12g24450 | - | - | Detail |
| C2H12g10767 | 12:12,293,874-12,294,431 | + | C1H12g09328 | CX12g017108 | LOC_Os12g24490 | Os12g0432600 | - | Detail |
| C2H12g07580 | 12:12,314,982-12,315,738 | - | - | - | - | - | - | Detail |
| C2H12g22841 | 12:12,328,661-12,336,002 | - | C1H12g01818 | CX12g016145 | LOC_Os12g24540 | Os12g0433200 | - | Detail |
| C2H12g15618 | 12:12,341,643-12,353,691 | - | C1H12g23644 | CX12g016494 | LOC_Os12g24550 | Os12g0433500 | - | Detail |
| C2H12g05476 | 12:12,401,463-12,403,730 | + | C1H12g14351 | - | LOC_Os12g24580 | Os12g0433700 | - | Detail |
| C2H12g16328 | 12:12,478,076-12,479,952 | + | C1H12g23524 | CX12g015536 | LOC_Os12g24650 | Os12g0434400 | - | Detail |
| C2H12g01529 | 12:12,483,694-12,488,936 | + | C1H12g23524 | CX12g015536 | LOC_Os12g24650 | Os12g0434400 | - | Detail |
| C2H12g17979 | 12:12,603,817-12,604,768 | + | - | CX12g017727 | - | Os12g0435100 | - | Detail |
| C2H12g00049 | 12:12,614,681-12,616,411 | + | C1H12g19273 | CX12g018731 | LOC_Os12g24800 | Os12g0435200 | OsCCD4b | Detail |
| C2H12g02093 | 12:12,626,417-12,627,007 | + | - | CX12g018692 | - | - | - | Detail |
| C2H12g11113 | 12:12,641,821-12,642,018 | - | C1H12g05019 | CX12g015912 | LOC_Os12g36210 | Os12g0548401 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g011597 | 11:22,160,959-22,166,221 | - | C1H11g23330 | C2H11g26569 | LOC_Os11g41820 | Os11g0636900 | OsU2AF65A | Detail |
| CX11g014805 | 11:22,167,124-22,168,665 | - | C1H11g07280 | C2H11g12954 | LOC_Os11g41840 | Os11g0637100 | OsPLT11 | Detail |
| CX11g012689 | 11:22,173,703-22,175,321 | - | C1H11g20750 | C2H11g05836 | LOC_Os11g41840 | Os11g0637100 | OsPLT11 | Detail |
| CX11g014397 | 11:22,180,155-22,181,793 | - | C1H11g07280 | C2H11g26057 | LOC_Os11g41850 | Os11g0637200 | OsPLT12 | Detail |
| CX11g014218 | 11:22,185,281-22,186,913 | + | C1H11g04568 | C2H11g01232 | LOC_Os11g41860 | Os11g0637300 | - | Detail |
| CX11g013922 | 11:22,198,120-22,199,830 | + | C1H11g21328 | C2H11g01232 | LOC_Os11g41860 | Os11g0637300 | - | Detail |
| CX11g014541 | 11:22,201,654-22,203,176 | - | C1H11g28520 | C2H11g18143 | LOC_Os11g41870 | Os11g0637400 | OsPLT13 | Detail |
| CX11g012059 | 11:22,205,268-22,205,465 | - | C1H11g11924 | C2H11g25023 | LOC_Os11g41875 | Os11g0637501 | - | Detail |
| CX11g014677 | 11:22,207,819-22,209,789 | - | C1H11g11834 | C2H11g06094 | LOC_Os11g41880 | Os11g0637600 | - | Detail |
| CX11g013418 | 11:22,219,731-22,221,767 | + | C1H11g18437 | C2H11g23632 | LOC_Os11g41890 | Os11g0637700 | - | Detail |
| CX11g012671 | 11:22,227,016-22,232,716 | - | C1H11g02220 | C2H11g11167 | LOC_Os11g41900 | Os11g0637800 | OsLPAT2 | Detail |
| CX11g013667 | 11:22,232,640-22,233,026 | + | - | C2H11g12421 | - | Os11g0637900 | - | Detail |
| CX11g015032 | 11:22,238,116-22,244,032 | + | C1H11g07864 | C2H11g19429 | LOC_Os11g41910 | Os11g0638000 | - | Detail |
| CX11g010889 | 11:22,245,976-22,248,867 | + | C1H11g09334 | C2H11g03357 | LOC_Os11g41920 | Os11g0638200 | - | Detail |
| CX11g013312 | 11:22,258,551-22,259,033 | - | - | - | LOC_Os11g41950 | - | - | Detail |
| CX11g012224 | 11:22,265,358-22,280,168 | - | C1H11g30292 | C2H11g21824 | LOC_Os11g41990 | Os11g0638700 | - | Detail |
| CX11g013700 | 11:22,285,877-22,286,098 | - | - | - | - | - | - | Detail |
| CX11g011607 | 11:22,287,101-22,291,477 | + | C1H11g14461 | C2H11g03512 | LOC_Os11g42000 | Os11g0639000 | - | Detail |
| CX11g014851 | 11:22,292,457-22,295,603 | - | C1H11g01927 | C2H11g16299 | LOC_Os11g42010 | Os11g0639100 | Pi54, Pi-kh, Pi-k<sup>h</sup> | Detail |
| CX11g013493 | 11:22,300,532-22,303,014 | + | C1H11g03112 | C2H11g25522 | LOC_Os11g39230 | Os11g0534500 | - | Detail |