| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g22599 | 6:11,303,238-11,307,178 | + | C1H6g14702 | CX6g044483 | LOC_Os06g29810 | Os06g0494100 | - | Detail |
| C2H6g02764 | 6:11,308,134-11,311,058 | - | C1H6g09776 | CX6g044981 | LOC_Os06g29804 | Os06g0494000 | - | Detail |
| C2H6g11176 | 6:11,319,740-11,323,715 | + | C1H6g00503 | CX6g045611 | LOC_Os06g29800 | Os06g0493801 | - | Detail |
| C2H6g12361 | 6:11,325,960-11,330,588 | - | C1H6g25288 | CX6g043536 | LOC_Os06g29790 | Os06g0493600 | PHO1;3, OsPHO1;3, OsPHT1 | Detail |
| C2H6g18673 | 6:11,369,758-11,370,673 | + | C1H2g13832 | CX6g045751 | - | - | - | Detail |
| C2H6g06361 | 6:11,377,310-11,383,321 | + | - | CX6g045304 | - | - | - | Detail |
| C2H6g23940 | 6:11,402,574-11,403,934 | + | C1H6g25548 | CX6g041507 | LOC_Os06g29730 | Os06g0493100 | Bphi008a, BpHi008A | Detail |
| C2H6g02400 | 6:11,408,677-11,410,506 | - | C1H6g27068 | CX6g045895 | LOC_Os06g29710 | Os06g0492900 | - | Detail |
| C2H6g01793 | 6:11,418,155-11,427,864 | - | C1H6g17018 | CX6g045522 | LOC_Os06g29700 | Os06g0492800 | - | Detail |
| C2H6g10189 | 6:11,437,519-11,439,801 | + | C1H6g14514 | - | - | Os06g0492000 | - | Detail |
| C2H6g11286 | 6:11,445,661-11,446,106 | - | C1H6g29616 | CX6g045448 | - | - | - | Detail |
| C2H6g23281 | 6:11,449,006-11,452,483 | + | - | - | - | - | - | Detail |
| C2H6g08186 | 6:11,559,296-11,560,154 | - | C1H6g12968 | CX6g045255 | LOC_Os06g29490 | Os06g0490700 | - | Detail |
| C2H6g14122 | 6:11,582,606-11,583,755 | - | C1H6g24624 | CX6g042185 | LOC_Os06g29470 | Os06g0490400 | - | Detail |
| C2H6g19041 | 6:11,590,490-11,591,839 | - | C1H6g27071 | CX6g041461 | LOC_Os06g29450 | Os06g0489900 | - | Detail |
| C2H6g09894 | 6:11,614,582-11,621,405 | - | C1H6g29613 | CX6g045447 | LOC_Os06g29430 | Os06g0489500 | - | Detail |
| C2H6g21962 | 6:11,624,588-11,636,435 | + | C1H6g28293 | CX6g041169 | LOC_Os06g29400 | Os06g0489200 | - | Detail |
| C2H6g10365 | 6:11,687,616-11,694,094 | + | C1H6g16211 | CX6g045048 | LOC_Os06g29380 | Os06g0488600 | - | Detail |
| C2H6g11225 | 6:11,709,244-11,719,889 | - | C1H6g01298 | CX6g044118 | LOC_Os06g29350 | Os06g0488200 | - | Detail |
| C2H6g20261 | 6:11,724,314-11,728,832 | - | C1H6g14284 | CX6g044297 | LOC_Os06g29340 | Os06g0488050 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g011597 | 11:22,160,959-22,166,221 | - | C1H11g23330 | C2H11g26569 | LOC_Os11g41820 | Os11g0636900 | OsU2AF65A | Detail |
| CX11g014805 | 11:22,167,124-22,168,665 | - | C1H11g07280 | C2H11g12954 | LOC_Os11g41840 | Os11g0637100 | OsPLT11 | Detail |
| CX11g012689 | 11:22,173,703-22,175,321 | - | C1H11g20750 | C2H11g05836 | LOC_Os11g41840 | Os11g0637100 | OsPLT11 | Detail |
| CX11g014397 | 11:22,180,155-22,181,793 | - | C1H11g07280 | C2H11g26057 | LOC_Os11g41850 | Os11g0637200 | OsPLT12 | Detail |
| CX11g014218 | 11:22,185,281-22,186,913 | + | C1H11g04568 | C2H11g01232 | LOC_Os11g41860 | Os11g0637300 | - | Detail |
| CX11g013922 | 11:22,198,120-22,199,830 | + | C1H11g21328 | C2H11g01232 | LOC_Os11g41860 | Os11g0637300 | - | Detail |
| CX11g014541 | 11:22,201,654-22,203,176 | - | C1H11g28520 | C2H11g18143 | LOC_Os11g41870 | Os11g0637400 | OsPLT13 | Detail |
| CX11g012059 | 11:22,205,268-22,205,465 | - | C1H11g11924 | C2H11g25023 | LOC_Os11g41875 | Os11g0637501 | - | Detail |
| CX11g014677 | 11:22,207,819-22,209,789 | - | C1H11g11834 | C2H11g06094 | LOC_Os11g41880 | Os11g0637600 | - | Detail |
| CX11g013418 | 11:22,219,731-22,221,767 | + | C1H11g18437 | C2H11g23632 | LOC_Os11g41890 | Os11g0637700 | - | Detail |
| CX11g012671 | 11:22,227,016-22,232,716 | - | C1H11g02220 | C2H11g11167 | LOC_Os11g41900 | Os11g0637800 | OsLPAT2 | Detail |
| CX11g013667 | 11:22,232,640-22,233,026 | + | - | C2H11g12421 | - | Os11g0637900 | - | Detail |
| CX11g015032 | 11:22,238,116-22,244,032 | + | C1H11g07864 | C2H11g19429 | LOC_Os11g41910 | Os11g0638000 | - | Detail |
| CX11g010889 | 11:22,245,976-22,248,867 | + | C1H11g09334 | C2H11g03357 | LOC_Os11g41920 | Os11g0638200 | - | Detail |
| CX11g013312 | 11:22,258,551-22,259,033 | - | - | - | LOC_Os11g41950 | - | - | Detail |
| CX11g012224 | 11:22,265,358-22,280,168 | - | C1H11g30292 | C2H11g21824 | LOC_Os11g41990 | Os11g0638700 | - | Detail |
| CX11g013700 | 11:22,285,877-22,286,098 | - | - | - | - | - | - | Detail |
| CX11g011607 | 11:22,287,101-22,291,477 | + | C1H11g14461 | C2H11g03512 | LOC_Os11g42000 | Os11g0639000 | - | Detail |
| CX11g014851 | 11:22,292,457-22,295,603 | - | C1H11g01927 | C2H11g16299 | LOC_Os11g42010 | Os11g0639100 | Pi54, Pi-kh, Pi-k<sup>h</sup> | Detail |
| CX11g013493 | 11:22,300,532-22,303,014 | + | C1H11g03112 | C2H11g25522 | LOC_Os11g39230 | Os11g0534500 | - | Detail |