| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g00659 | 4:30,433,747-30,436,563 | - | C2H4g25864 | - | LOC_Os04g58550 | Os04g0681900 | OsACBP4 | Detail |
| C1H4g09164 | 4:30,437,028-30,439,206 | - | C2H4g11364 | CX4g033932 | LOC_Os04g58555 | Os04g0681950 | - | Detail |
| C1H4g23612 | 4:30,439,731-30,444,270 | - | C2H4g24606 | CX4g032790 | LOC_Os04g58560 | Os04g0682000 | OsAtg4 | Detail |
| C1H4g13982 | 4:30,444,769-30,447,283 | - | C2H4g12424 | CX4g036630 | LOC_Os04g58564 | Os04g0682050 | OsDRE2b | Detail |
| C1H4g03764 | 4:30,449,159-30,450,707 | + | C2H4g09113 | CX4g032229 | LOC_Os04g58570 | Os04g0682100 | - | Detail |
| C1H4g13874 | 4:30,451,560-30,454,445 | + | C2H4g12704 | CX4g032668 | LOC_Os04g58580 | Os04g0682300 | - | Detail |
| C1H4g04791 | 4:30,455,452-30,459,846 | - | C2H4g12875 | CX4g036041 | LOC_Os04g58590 | Os04g0682400 | - | Detail |
| C1H4g28533 | 4:30,461,462-30,465,080 | + | C2H4g17181 | CX4g035113 | LOC_Os04g58600 | Os04g0682500 | - | Detail |
| C1H4g29653 | 4:30,468,760-30,486,074 | - | C2H4g03946 | CX4g034300 | LOC_Os04g58620 | Os04g0682800 | - | Detail |
| C1H4g01136 | 4:30,486,765-30,490,104 | - | C2H4g28695 | CX4g036644 | LOC_Os04g58640 | Os04g0683100 | - | Detail |
| C1H4g02161 | 4:30,501,257-30,503,589 | + | C2H4g18113 | CX4g033383 | LOC_Os04g58690 | Os04g0683500 | - | Detail |
| C1H4g12491 | 4:30,512,205-30,517,795 | + | C2H4g00628 | CX4g035511 | LOC_Os04g58700 | Os04g0683600 | - | Detail |
| C1H4g05282 | 4:30,519,328-30,521,281 | - | C2H4g20996 | CX4g034879 | LOC_Os04g58710 | Os04g0683700 | OsAAE3 | Detail |
| C1H4g11991 | 4:30,525,250-30,529,391 | + | - | - | - | - | - | Detail |
| C1H4g17079 | 4:30,529,919-30,531,076 | + | C2H4g00697 | CX4g033496 | - | Os04g0683850 | - | Detail |
| C1H4g07968 | 4:30,531,515-30,534,221 | - | C2H4g01840 | CX4g032610 | LOC_Os04g58730 | Os04g0683900 | - | Detail |
| C1H4g20128 | 4:30,551,123-30,558,001 | + | C2H4g26858 | CX4g033459 | LOC_Os04g58750 | Os04g0684200 | OsBSK3 | Detail |
| C1H4g02282 | 4:30,558,802-30,559,655 | + | C2H4g01802 | CX4g033405 | LOC_Os04g58760 | Os04g0684300 | OsCASP1 | Detail |
| C1H4g18219 | 4:30,562,619-30,573,678 | + | C2H4g02516 | CX4g031834 | LOC_Os04g58780 | Os04g0684500 | - | Detail |
| C1H4g26669 | 4:30,577,591-30,579,340 | + | C2H4g22761 | CX4g033643 | LOC_Os04g58800 | Os04g0684800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g011597 | 11:22,160,959-22,166,221 | - | C1H11g23330 | C2H11g26569 | LOC_Os11g41820 | Os11g0636900 | OsU2AF65A | Detail |
| CX11g014805 | 11:22,167,124-22,168,665 | - | C1H11g07280 | C2H11g12954 | LOC_Os11g41840 | Os11g0637100 | OsPLT11 | Detail |
| CX11g012689 | 11:22,173,703-22,175,321 | - | C1H11g20750 | C2H11g05836 | LOC_Os11g41840 | Os11g0637100 | OsPLT11 | Detail |
| CX11g014397 | 11:22,180,155-22,181,793 | - | C1H11g07280 | C2H11g26057 | LOC_Os11g41850 | Os11g0637200 | OsPLT12 | Detail |
| CX11g014218 | 11:22,185,281-22,186,913 | + | C1H11g04568 | C2H11g01232 | LOC_Os11g41860 | Os11g0637300 | - | Detail |
| CX11g013922 | 11:22,198,120-22,199,830 | + | C1H11g21328 | C2H11g01232 | LOC_Os11g41860 | Os11g0637300 | - | Detail |
| CX11g014541 | 11:22,201,654-22,203,176 | - | C1H11g28520 | C2H11g18143 | LOC_Os11g41870 | Os11g0637400 | OsPLT13 | Detail |
| CX11g012059 | 11:22,205,268-22,205,465 | - | C1H11g11924 | C2H11g25023 | LOC_Os11g41875 | Os11g0637501 | - | Detail |
| CX11g014677 | 11:22,207,819-22,209,789 | - | C1H11g11834 | C2H11g06094 | LOC_Os11g41880 | Os11g0637600 | - | Detail |
| CX11g013418 | 11:22,219,731-22,221,767 | + | C1H11g18437 | C2H11g23632 | LOC_Os11g41890 | Os11g0637700 | - | Detail |
| CX11g012671 | 11:22,227,016-22,232,716 | - | C1H11g02220 | C2H11g11167 | LOC_Os11g41900 | Os11g0637800 | OsLPAT2 | Detail |
| CX11g013667 | 11:22,232,640-22,233,026 | + | - | C2H11g12421 | - | Os11g0637900 | - | Detail |
| CX11g015032 | 11:22,238,116-22,244,032 | + | C1H11g07864 | C2H11g19429 | LOC_Os11g41910 | Os11g0638000 | - | Detail |
| CX11g010889 | 11:22,245,976-22,248,867 | + | C1H11g09334 | C2H11g03357 | LOC_Os11g41920 | Os11g0638200 | - | Detail |
| CX11g013312 | 11:22,258,551-22,259,033 | - | - | - | LOC_Os11g41950 | - | - | Detail |
| CX11g012224 | 11:22,265,358-22,280,168 | - | C1H11g30292 | C2H11g21824 | LOC_Os11g41990 | Os11g0638700 | - | Detail |
| CX11g013700 | 11:22,285,877-22,286,098 | - | - | - | - | - | - | Detail |
| CX11g011607 | 11:22,287,101-22,291,477 | + | C1H11g14461 | C2H11g03512 | LOC_Os11g42000 | Os11g0639000 | - | Detail |
| CX11g014851 | 11:22,292,457-22,295,603 | - | C1H11g01927 | C2H11g16299 | LOC_Os11g42010 | Os11g0639100 | Pi54, Pi-kh, Pi-k<sup>h</sup> | Detail |
| CX11g013493 | 11:22,300,532-22,303,014 | + | C1H11g03112 | C2H11g25522 | LOC_Os11g39230 | Os11g0534500 | - | Detail |