| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g22599 | 1:19,230,132-19,232,501 | + | C2H1g20640 | CX1g002304 | LOC_Os01g37850 | Os01g0559300 | - | Detail |
| C1H1g25483 | 1:19,235,694-19,241,490 | + | C2H1g12740 | CX1g002284 | LOC_Os01g37870 | Os01g0559500 | WSL | Detail |
| C1H1g09753 | 1:19,256,974-19,261,840 | + | C2H1g20416 | CX1g001668 | LOC_Os01g37910 | Os01g0559600 | - | Detail |
| C1H1g31264 | 1:19,278,164-19,283,572 | - | C2H1g03829 | CX1g000591 | LOC_Os01g37960 | Os01g0560000 | - | Detail |
| C1H1g27095 | 1:19,288,407-19,291,592 | + | C2H1g09836 | CX1g005030 | LOC_Os01g37980 | Os01g0560200 | - | Detail |
| C1H1g29224 | 1:19,295,469-19,296,303 | + | C2H1g01651 | CX1g005030 | LOC_Os01g37980 | Os01g0560200 | - | Detail |
| C1H1g31306 | 1:19,297,384-19,298,244 | - | C2H1g18000 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g05766 | 1:19,331,353-19,331,679 | - | C2H1g18173 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g01734 | 1:19,331,825-19,332,637 | - | C2H1g03153 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g13005 | 1:19,333,259-19,333,798 | + | C2H1g08899 | - | LOC_Os01g38130 | - | - | Detail |
| C1H1g14910 | 1:19,336,594-19,338,533 | + | C2H1g08899 | - | LOC_Os01g38140 | Os01g0562400 | - | Detail |
| C1H1g18853 | 1:19,340,896-19,343,206 | + | C2H1g08899 | - | LOC_Os01g38140 | Os01g0562400 | - | Detail |
| C1H1g17141 | 1:19,345,310-19,346,650 | - | C2H1g03153 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g25180 | 1:19,351,335-19,352,938 | + | C2H1g24757 | CX1g001538 | LOC_Os01g38229 | Os01g0563000 | - | Detail |
| C1H1g26653 | 1:19,358,538-19,361,602 | - | C2H1g25581 | CX1g002676 | LOC_Os01g38480 | Os01g0565600 | - | Detail |
| C1H1g00748 | 1:19,361,641-19,364,455 | + | C2H1g27995 | CX1g004835 | LOC_Os01g42520 | Os01g0611000 | - | Detail |
| C1H1g23185 | 1:19,362,222-19,362,722 | - | - | CX1g007049 | LOC_Os01g38490 | Os01g0565650 | - | Detail |
| C1H1g06422 | 1:19,365,602-19,367,307 | - | C2H1g19973 | CX1g003543 | LOC_Os01g38500 | Os01g0565800 | - | Detail |
| C1H1g16023 | 1:19,373,800-19,379,989 | - | C2H1g30274 | CX1g005683 | LOC_Os01g38530 | Os01g0566100 | OsELF3.2, ELF3_chr.1, OsELF3-2 | Detail |
| C1H1g13897 | 1:19,389,518-19,392,217 | - | C2H1g05106 | CX1g000412 | LOC_Os01g38580 | Os01g0566500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g011597 | 11:22,160,959-22,166,221 | - | C1H11g23330 | C2H11g26569 | LOC_Os11g41820 | Os11g0636900 | OsU2AF65A | Detail |
| CX11g014805 | 11:22,167,124-22,168,665 | - | C1H11g07280 | C2H11g12954 | LOC_Os11g41840 | Os11g0637100 | OsPLT11 | Detail |
| CX11g012689 | 11:22,173,703-22,175,321 | - | C1H11g20750 | C2H11g05836 | LOC_Os11g41840 | Os11g0637100 | OsPLT11 | Detail |
| CX11g014397 | 11:22,180,155-22,181,793 | - | C1H11g07280 | C2H11g26057 | LOC_Os11g41850 | Os11g0637200 | OsPLT12 | Detail |
| CX11g014218 | 11:22,185,281-22,186,913 | + | C1H11g04568 | C2H11g01232 | LOC_Os11g41860 | Os11g0637300 | - | Detail |
| CX11g013922 | 11:22,198,120-22,199,830 | + | C1H11g21328 | C2H11g01232 | LOC_Os11g41860 | Os11g0637300 | - | Detail |
| CX11g014541 | 11:22,201,654-22,203,176 | - | C1H11g28520 | C2H11g18143 | LOC_Os11g41870 | Os11g0637400 | OsPLT13 | Detail |
| CX11g012059 | 11:22,205,268-22,205,465 | - | C1H11g11924 | C2H11g25023 | LOC_Os11g41875 | Os11g0637501 | - | Detail |
| CX11g014677 | 11:22,207,819-22,209,789 | - | C1H11g11834 | C2H11g06094 | LOC_Os11g41880 | Os11g0637600 | - | Detail |
| CX11g013418 | 11:22,219,731-22,221,767 | + | C1H11g18437 | C2H11g23632 | LOC_Os11g41890 | Os11g0637700 | - | Detail |
| CX11g012671 | 11:22,227,016-22,232,716 | - | C1H11g02220 | C2H11g11167 | LOC_Os11g41900 | Os11g0637800 | OsLPAT2 | Detail |
| CX11g013667 | 11:22,232,640-22,233,026 | + | - | C2H11g12421 | - | Os11g0637900 | - | Detail |
| CX11g015032 | 11:22,238,116-22,244,032 | + | C1H11g07864 | C2H11g19429 | LOC_Os11g41910 | Os11g0638000 | - | Detail |
| CX11g010889 | 11:22,245,976-22,248,867 | + | C1H11g09334 | C2H11g03357 | LOC_Os11g41920 | Os11g0638200 | - | Detail |
| CX11g013312 | 11:22,258,551-22,259,033 | - | - | - | LOC_Os11g41950 | - | - | Detail |
| CX11g012224 | 11:22,265,358-22,280,168 | - | C1H11g30292 | C2H11g21824 | LOC_Os11g41990 | Os11g0638700 | - | Detail |
| CX11g013700 | 11:22,285,877-22,286,098 | - | - | - | - | - | - | Detail |
| CX11g011607 | 11:22,287,101-22,291,477 | + | C1H11g14461 | C2H11g03512 | LOC_Os11g42000 | Os11g0639000 | - | Detail |
| CX11g014851 | 11:22,292,457-22,295,603 | - | C1H11g01927 | C2H11g16299 | LOC_Os11g42010 | Os11g0639100 | Pi54, Pi-kh, Pi-k<sup>h</sup> | Detail |
| CX11g013493 | 11:22,300,532-22,303,014 | + | C1H11g03112 | C2H11g25522 | LOC_Os11g39230 | Os11g0534500 | - | Detail |