| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g09834 | 1:9,111,388-9,111,723 | + | C2H1g08442 | - | - | - | - | Detail |
| C1H1g31050 | 1:9,113,543-9,122,637 | + | C2H1g22354 | CX1g005156 | LOC_Os01g18150 | Os01g0284300 | - | Detail |
| C1H1g09627 | 1:9,124,603-9,125,372 | - | C2H1g13905 | CX1g002731 | LOC_Os01g18170 | Os01g0284500 | OsGER4 | Detail |
| C1H1g10680 | 1:9,132,796-9,135,738 | + | C2H1g17254 | CX1g000924 | LOC_Os01g18210 | Os01g0284700 | - | Detail |
| C1H1g13588 | 1:9,141,749-9,142,612 | - | C2H1g07308 | CX1g001111 | LOC_Os01g18220 | Os01g0284900 | - | Detail |
| C1H1g17641 | 1:9,154,576-9,155,375 | - | C2H1g20440 | CX1g003253 | LOC_Os01g18230 | Os01g0759700 | - | Detail |
| C1H1g06479 | 1:9,163,852-9,166,083 | - | C2H1g10789 | CX1g006251 | LOC_Os01g18240 | Os01g0285300 | MYB61, OsMYB55/61, JMTF1 | Detail |
| C1H1g05697 | 1:9,211,047-9,214,437 | + | C2H1g03219 | CX1g000217 | LOC_Os01g18280 | Os01g0286000 | - | Detail |
| C1H1g18723 | 1:9,219,612-9,223,119 | - | C2H1g23388 | CX1g006989 | LOC_Os01g13460 | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| C1H1g02909 | 1:9,238,369-9,239,842 | - | C2H1g25947 | CX1g001405 | LOC_Os11g02650 | - | - | Detail |
| C1H1g25972 | 1:9,241,032-9,242,334 | - | C2H1g12260 | - | LOC_Os01g13050 | Os01g0861400 | - | Detail |
| C1H1g02936 | 1:9,244,036-9,247,610 | + | C2H1g13264 | CX1g004036 | LOC_Os01g18320 | Os01g0286600 | OsPPO1 | Detail |
| C1H1g02001 | 1:9,260,143-9,263,439 | + | C2H1g18493 | CX1g000296 | LOC_Os01g18360 | Os01g0286900 | - | Detail |
| C1H1g26094 | 1:9,285,715-9,286,050 | + | C2H1g16973 | CX1g002314 | LOC_Os01g18375 | Os07g0635900 | OsLti6a | Detail |
| C1H1g20358 | 1:9,288,357-9,288,734 | - | C2H1g04657 | CX1g007034 | LOC_Os01g18400 | Os01g0287600 | - | Detail |
| C1H1g26001 | 1:9,289,217-9,289,708 | - | C2H1g10428 | CX1g007034 | LOC_Os01g18400 | Os01g0287600 | - | Detail |
| C1H1g01375 | 1:9,324,450-9,324,810 | - | C2H1g21581 | CX1g005603 | LOC_Os01g18450 | Os01g0288200 | - | Detail |
| C1H1g15975 | 1:9,340,737-9,341,039 | - | C2H1g03324 | - | LOC_Os01g18490 | Os01g0288800 | - | Detail |
| C1H1g27658 | 1:9,376,678-9,383,015 | + | C2H1g00434 | CX1g004171 | LOC_Os01g18584 | Os01g0289600 | - | Detail |
| C1H1g31040 | 1:9,410,229-9,411,702 | - | C2H1g15794 | CX1g002453 | LOC_Os01g18620 | Os01g0289900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g014367 | 11:20,112,521-20,113,937 | - | C1H11g21812 | C2H11g09117 | LOC_Os11g38190 | Os11g0594500 | - | Detail |
| CX11g012460 | 11:20,131,067-20,131,495 | + | - | - | - | - | - | Detail |
| CX11g012113 | 11:20,147,591-20,150,801 | - | C1H11g21860 | C2H11g20964 | LOC_Os11g42100 | Os11g0588600 | - | Detail |
| CX11g012103 | 11:20,155,360-20,156,758 | - | C1H11g07962 | C2H11g04884 | LOC_Os11g38200 | Os11g0594600 | - | Detail |
| CX11g011680 | 11:20,168,914-20,170,880 | - | C1H11g17344 | C2H11g17034 | LOC_Os11g38250 | Os11g0595100 | - | Detail |
| CX11g012384 | 11:20,170,960-20,172,319 | + | C1H11g18678 | C2H11g21380 | LOC_Os11g38260 | Os11g0595200 | - | Detail |
| CX11g014083 | 11:20,174,598-20,175,268 | - | C1H11g10130 | C2H11g12628 | LOC_Os11g38270 | Os11g0595400 | FON2, FON2/FON4, FON4 | Detail |
| CX11g012513 | 11:20,201,086-20,203,885 | + | C1H11g27930 | C2H11g04547 | LOC_Os11g38390 | - | - | Detail |
| CX11g011699 | 11:20,205,031-20,205,339 | - | - | - | - | - | - | Detail |
| CX11g014812 | 11:20,223,960-20,228,036 | + | C1H11g28708 | C2H11g13068 | LOC_Os11g38520 | Os11g0579200 | ctp-1 | Detail |
| CX11g011997 | 11:20,236,371-20,245,529 | + | C1H11g13689 | C2H11g23010 | LOC_Os11g38610 | Os11g0598800 | - | Detail |
| CX11g011135 | 11:20,240,613-20,240,942 | - | C1H11g16302 | C2H11g04601 | LOC_Os10g10400 | - | - | Detail |
| CX11g011086 | 11:20,247,578-20,270,434 | + | C1H11g06455 | C2H11g21120 | LOC_Os11g38620 | Os11g0598900 | - | Detail |
| CX11g013653 | 11:20,271,323-20,277,366 | + | C1H11g31321 | C2H11g03079 | LOC_Os11g38640 | Os11g0599101 | - | Detail |
| CX11g014964 | 11:20,284,071-20,285,543 | - | C1H11g02200 | C2H11g09755 | LOC_Os11g38650 | Os11g0599200 | - | Detail |
| CX11g012724 | 11:20,303,152-20,307,581 | + | C1H11g10183 | C2H11g26322 | LOC_Os11g38670 | Os11g0599500 | - | Detail |
| CX11g013537 | 11:20,322,334-20,322,816 | - | - | - | - | - | - | Detail |
| CX11g014916 | 11:20,369,096-20,369,671 | - | C1H11g23225 | C2H11g27967 | LOC_Os11g38780 | Os11g0600500 | - | Detail |
| CX11g015029 | 11:20,375,353-20,379,824 | + | C1H11g23803 | C2H11g01438 | LOC_Os11g38800 | Os11g0600700 | - | Detail |
| CX11g010945 | 11:20,384,154-20,388,242 | + | C1H11g28120 | C2H11g06629 | LOC_Os11g38810 | Os11g0600900 | - | Detail |