| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g08146 | 3:25,060,344-25,073,286 | + | C1H3g30763 | CX3g027759 | - | - | - | Detail |
| C2H3g06193 | 3:25,080,310-25,093,249 | - | C1H3g31689 | CX3g025545 | LOC_Os03g48140 | Os03g0686300 | - | Detail |
| C2H3g15650 | 3:25,099,612-25,102,820 | + | C1H3g17077 | CX3g025241 | LOC_Os03g48160 | Os03g0253100 | - | Detail |
| C2H3g12008 | 3:25,104,383-25,108,435 | + | C1H3g31064 | CX3g025276 | LOC_Os03g48170 | Os03g0686900 | FLO6 | Detail |
| C2H3g19404 | 3:25,109,095-25,114,669 | - | C1H3g04074 | CX3g025668 | LOC_Os03g51050 | Os03g0687000 | OsNPF2.4, NPF2.4, OsPTR2, PTR2 | Detail |
| C2H3g17935 | 3:25,127,611-25,131,595 | - | C1H3g27780 | CX3g029198 | LOC_Os03g48190 | Os03g0687200 | - | Detail |
| C2H3g12687 | 3:25,135,284-25,136,030 | - | C1H3g26805 | CX3g025750 | LOC_Os03g48200 | Os03g0687400 | - | Detail |
| C2H3g13078 | 3:25,137,917-25,138,663 | - | C1H3g31647 | CX3g029222 | LOC_Os03g48220 | Os03g0687700 | - | Detail |
| C2H3g02466 | 3:25,140,936-25,141,493 | - | C1H3g02479 | CX3g025750 | LOC_Os03g48225 | Os03g0687800 | - | Detail |
| C2H3g05793 | 3:25,142,535-25,143,269 | - | C1H3g12014 | CX3g028579 | LOC_Os03g48235 | Os03g0688000 | - | Detail |
| C2H3g06136 | 3:25,144,788-25,145,247 | - | C1H3g12256 | CX3g029222 | LOC_Os03g48220 | Os03g0687700 | - | Detail |
| C2H3g19874 | 3:25,146,922-25,151,844 | + | C1H3g24497 | CX3g029090 | LOC_Os03g48260 | Os03g0688200 | - | Detail |
| C2H3g05160 | 3:25,157,608-25,163,002 | + | C1H3g21570 | CX3g025253 | LOC_Os03g48270 | Os03g0688300 | CDPK9, OsCDPK9, OsCPK9 | Detail |
| C2H3g19979 | 3:25,186,796-25,214,847 | + | C1H3g15303 | CX3g027485 | LOC_Os03g48300 | Os03g0689100 | - | Detail |
| C2H3g24844 | 3:25,222,977-25,230,070 | + | C1H3g28879 | CX3g027452 | LOC_Os03g48310 | Os03g0689300 | - | Detail |
| C2H3g06110 | 3:25,231,632-25,235,399 | - | C1H3g09435 | CX3g026383 | LOC_Os03g48380 | Os03g0689900 | - | Detail |
| C2H3g14932 | 3:25,237,216-25,239,557 | + | C1H3g04287 | CX3g027552 | LOC_Os03g48390 | Os03g0690000 | - | Detail |
| C2H3g03020 | 3:25,282,883-25,286,063 | - | C1H3g28354 | CX3g028707 | LOC_Os03g48450 | Os03g0690600 | - | Detail |
| C2H3g18585 | 3:25,290,921-25,294,737 | + | C1H3g15398 | - | LOC_Os03g48471 | Os03g0690700 | - | Detail |
| C2H3g25812 | 3:25,324,182-25,326,537 | - | C1H3g11606 | CX3g027625 | LOC_Os03g48480 | Os03g0691400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g014064 | 11:20,019,278-20,022,582 | - | C1H11g09697 | C2H11g13340 | LOC_Os11g38030 | Os11g0592800 | - | Detail |
| CX11g011167 | 11:20,023,501-20,025,337 | - | C1H11g22955 | C2H11g27401 | LOC_Os11g38040 | Os11g0592900 | - | Detail |
| CX11g012000 | 11:20,030,484-20,030,735 | + | - | - | - | Os11g0631825 | - | Detail |
| CX11g011244 | 11:20,031,395-20,035,980 | - | C1H11g03477 | C2H11g20216 | LOC_Os11g38050 | Os11g0593000 | - | Detail |
| CX11g013764 | 11:20,037,420-20,038,892 | + | C1H11g25206 | C2H11g24124 | LOC_Os11g38070 | Os11g0593100 | - | Detail |
| CX11g014657 | 11:20,044,744-20,046,887 | + | C1H11g25206 | C2H11g10054 | LOC_Os11g38070 | Os11g0593100 | - | Detail |
| CX11g011207 | 11:20,052,068-20,052,955 | + | C1H11g27260 | C2H11g25892 | - | - | - | Detail |
| CX11g013189 | 11:20,053,018-20,053,188 | - | - | - | - | - | - | Detail |
| CX11g014148 | 11:20,070,407-20,071,837 | + | C1H11g25206 | C2H11g03366 | LOC_Os11g38120 | Os11g0593500 | - | Detail |
| CX11g011700 | 11:20,075,578-20,076,855 | - | C1H11g28846 | C2H11g22099 | LOC_Os11g38130 | Os11g0593600 | - | Detail |
| CX11g012827 | 11:20,079,507-20,080,778 | - | C1H11g28846 | C2H11g04473 | LOC_Os11g38140 | Os11g0593700 | - | Detail |
| CX11g014322 | 11:20,083,816-20,084,154 | - | C1H11g18367 | C2H11g28394 | LOC_Os11g38150 | Os11g0549605 | - | Detail |
| CX11g011636 | 11:20,085,331-20,086,320 | - | C1H11g20961 | C2H11g16766 | LOC_Os11g38150 | Os11g0549605 | - | Detail |
| CX11g012219 | 11:20,087,485-20,088,111 | - | C1H11g20961 | C2H11g16766 | - | Os11g0593900 | - | Detail |
| CX11g013825 | 11:20,089,484-20,091,291 | + | C1H11g18586 | C2H11g02804 | LOC_Os11g38160 | Os11g0594000 | OsSTP28 | Detail |
| CX11g014381 | 11:20,096,950-20,102,946 | + | C1H11g03345 | C2H11g08989 | LOC_Os11g38170 | Os11g0594200 | - | Detail |
| CX11g011591 | 11:20,105,988-20,107,463 | - | C1H11g25206 | C2H11g03126 | LOC_Os11g38180 | Os11g0594400 | - | Detail |
| CX11g011041 | 11:20,108,096-20,109,280 | + | - | - | - | - | - | Detail |
| CX11g012148 | 11:20,109,508-20,110,642 | - | C1H11g06426 | C2H11g12527 | LOC_Os11g47640 | Os11g0702600 | - | Detail |
| CX11g014782 | 11:20,110,194-20,111,005 | + | C1H3g02748 | C2H6g27077 | - | Os11g0702501 | - | Detail |