| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g09670 | 6:25,880,842-25,883,508 | - | C2H6g03801 | CX6g043434 | LOC_Os06g48980 | Os06g0703000 | - | Detail |
| C1H6g18502 | 6:25,887,723-25,892,407 | - | C2H6g17371 | CX6g045780 | LOC_Os06g49010 | Os06g0703500 | - | Detail |
| C1H6g16279 | 6:25,896,374-25,897,321 | - | - | - | LOC_Os06g49020 | Os06g0703600 | - | Detail |
| C1H6g29648 | 6:25,898,415-25,901,197 | + | C2H6g15424 | CX6g045783 | LOC_Os06g49030 | Os06g0703800 | - | Detail |
| C1H6g07308 | 6:25,910,174-25,919,099 | + | C2H6g26654 | CX6g045465 | LOC_Os06g49040 | Os06g0703900 | - | Detail |
| C1H6g31643 | 6:25,920,872-25,924,324 | + | C2H6g01098 | CX6g043942 | LOC_Os06g49060 | Os06g0704100 | - | Detail |
| C1H6g21776 | 6:25,925,126-25,925,469 | - | C2H6g14094 | CX6g043513 | LOC_Os06g49070 | Os06g0704200 | - | Detail |
| C1H6g04818 | 6:25,926,051-25,929,679 | + | C2H6g09929 | CX6g042446 | LOC_Os06g49080 | Os06g0704300 | C3H46, OsC3H46, LIC, OsLIC | Detail |
| C1H6g07512 | 6:25,931,685-25,936,836 | + | C2H6g08437 | CX6g045885 | LOC_Os06g49090 | Os06g0704400 | - | Detail |
| C1H6g27120 | 6:25,942,129-25,943,754 | + | C2H6g13363 | CX6g044421 | LOC_Os06g49100 | Os06g0704500 | - | Detail |
| C1H6g00037 | 6:25,945,314-25,949,616 | - | C2H6g08289 | CX6g045141 | LOC_Os06g49110 | Os06g0704600 | - | Detail |
| C1H6g20822 | 6:25,950,325-25,954,757 | - | C2H6g04274 | CX6g043594 | LOC_Os06g49120 | Os06g0704700 | - | Detail |
| C1H6g30381 | 6:25,956,036-25,970,978 | - | C2H6g29592 | CX6g043593 | LOC_Os06g49130 | Os06g0704800 | OsHAC704, OsHAC12 | Detail |
| C1H6g14385 | 6:25,971,877-25,974,591 | + | C2H6g27374 | CX6g041788 | LOC_Os06g49140 | Os06g0704900 | - | Detail |
| C1H6g27051 | 6:25,976,378-25,978,262 | + | C2H6g16318 | CX6g041568 | LOC_Os06g49150 | Os06g0705000 | OsGMT1 | Detail |
| C1H6g17550 | 6:25,979,273-25,980,346 | + | C2H6g07212 | CX6g041902 | LOC_Os06g49160 | Os06g0705100 | - | Detail |
| C1H6g05795 | 6:25,981,184-25,984,997 | - | C2H6g22144 | CX6g044278 | LOC_Os06g49170 | Os06g0705200 | - | Detail |
| C1H6g31669 | 6:25,987,417-25,993,127 | - | C2H6g27734 | CX6g041917 | LOC_Os06g49185 | Os06g0705300 | - | Detail |
| C1H6g13928 | 6:25,993,988-25,996,225 | - | C2H6g16745 | CX6g041917 | LOC_Os06g46840 | Os06g0705350 | - | Detail |
| C1H6g11993 | 6:25,997,556-25,997,852 | + | - | CX6g044181 | LOC_Os06g49190 | Os06g0705400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001919 | 1:6,566,054-6,569,182 | + | C1H1g07412 | C2H1g27473 | LOC_Os01g13190 | Os01g0232700 | - | Detail |
| CX1g005183 | 1:6,570,026-6,575,091 | - | C1H1g27448 | C2H1g30141 | LOC_Os01g13200 | Os01g0232800 | - | Detail |
| CX1g001448 | 1:6,582,715-6,584,382 | - | C1H1g06424 | C2H1g11338 | LOC_Os01g13210 | Os01g0233000 | - | Detail |
| CX1g000967 | 1:6,588,437-6,603,156 | - | C1H1g16203 | C2H1g29341 | LOC_Os01g13260 | Os01g0233100 | - | Detail |
| CX1g006081 | 1:6,619,969-6,622,696 | + | C1H1g30233 | C2H1g17078 | LOC_Os01g13250 | Os01g0233400 | hwe2, OsEAF6 | Detail |
| CX1g003574 | 1:6,624,489-6,628,465 | - | C1H1g29655 | C2H1g12574 | LOC_Os01g13260 | Os01g0233100 | - | Detail |
| CX1g002029 | 1:6,639,873-6,643,799 | - | C1H1g24916 | C2H1g06068 | LOC_Os01g13260 | Os01g0233500 | - | Detail |
| CX1g005790 | 1:6,648,932-6,653,236 | + | C1H1g17912 | C2H1g12183 | LOC_Os01g13270 | Os01g0233800 | OsAGC2 | Detail |
| CX1g005994 | 1:6,654,387-6,657,852 | - | C1H1g04056 | C2H1g07383 | LOC_Os01g13280 | Os01g0233900 | - | Detail |
| CX1g000749 | 1:6,662,970-6,664,074 | + | - | C2H1g01408 | - | - | - | Detail |
| CX1g002661 | 1:6,666,028-6,666,687 | - | - | - | - | - | - | Detail |
| CX1g004577 | 1:6,666,850-6,667,137 | + | - | C2H1g13959 | - | - | - | Detail |
| CX1g001106 | 1:6,669,675-6,673,575 | + | C1H1g07710 | C2H1g17572 | LOC_Os01g13300 | Os01g0234100 | - | Detail |
| CX1g002451 | 1:6,683,535-6,685,141 | + | C1H1g17820 | C2H1g00776 | LOC_Os01g13320 | Os01g0234300 | - | Detail |
| CX1g006970 | 1:6,692,223-6,694,186 | + | C1H1g16176 | C2H1g00776 | LOC_Os01g13320 | Os01g0234300 | - | Detail |
| CX1g003583 | 1:6,695,743-6,695,913 | - | - | - | - | - | - | Detail |
| CX1g002857 | 1:6,698,957-6,699,733 | + | - | C2H1g04213 | LOC_Os01g13340 | Os01g0234700 | - | Detail |
| CX1g006902 | 1:6,700,636-6,703,020 | - | C1H1g30592 | C2H1g15510 | LOC_Os01g13350 | Os01g0234800 | - | Detail |
| CX1g005309 | 1:6,704,959-6,707,173 | - | C1H1g31197 | C2H1g00641 | LOC_Os01g13360 | Os01g0234850 | - | Detail |
| CX1g007217 | 1:6,711,997-6,714,082 | - | C1H1g03309 | C2H1g15769 | LOC_Os01g13370 | Os01g0234900 | RIP3 | Detail |