| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g09151 | 6:8,902,553-8,902,936 | - | - | CX6g043486 | - | - | - | Detail |
| C2H6g23022 | 6:8,918,332-8,921,114 | - | C1H6g12576 | CX6g043385 | LOC_Os06g18990 | Os06g0294000 | - | Detail |
| C2H6g12570 | 6:8,924,790-8,927,507 | - | C1H6g25575 | CX6g043385 | LOC_Os06g19010 | Os06g0294200 | - | Detail |
| C2H6g00822 | 6:8,950,439-8,952,469 | - | C1H6g06599 | CX6g041846 | LOC_Os06g19070 | Os06g0294600 | - | Detail |
| C2H6g13145 | 6:8,991,951-8,992,373 | + | - | - | - | - | - | Detail |
| C2H6g03899 | 6:8,995,028-8,999,427 | - | C1H6g29535 | CX6g043385 | LOC_Os06g19110 | Os06g0295000 | - | Detail |
| C2H6g09047 | 6:9,012,336-9,015,049 | + | C1H6g22090 | CX6g045233 | LOC_Os06g19130 | Os06g0295300 | - | Detail |
| C2H6g17506 | 6:9,021,777-9,024,945 | - | C1H6g16739 | CX6g045981 | LOC_Os06g19160 | - | - | Detail |
| C2H6g29586 | 6:9,027,133-9,029,287 | + | C1H6g03087 | CX6g041459 | LOC_Os06g19170 | Os06g0296100 | OsCTF | Detail |
| C2H6g27005 | 6:9,034,162-9,037,827 | + | - | - | - | - | - | Detail |
| C2H6g20590 | 6:9,048,147-9,049,141 | + | C1H6g22090 | CX6g045038 | LOC_Os06g19210 | Os06g0296100 | OsCTF | Detail |
| C2H6g02475 | 6:9,049,151-9,051,090 | + | C1H6g22090 | CX6g045038 | LOC_Os06g19210 | Os06g0296100 | OsCTF | Detail |
| C2H6g08554 | 6:9,053,253-9,053,651 | - | - | CX6g043280 | - | Os06g0296450 | - | Detail |
| C2H6g01914 | 6:9,055,676-9,058,379 | - | C1H6g30068 | CX6g042205 | LOC_Os06g19260 | Os06g0296700 | - | Detail |
| C2H6g08994 | 6:9,064,835-9,067,888 | - | C1H6g17197 | CX6g042902 | LOC_Os06g19300 | Os06g0296900 | - | Detail |
| C2H6g05439 | 6:9,101,644-9,102,903 | - | C1H6g19074 | CX6g043728 | LOC_Os06g19360 | Os06g0297300 | - | Detail |
| C2H6g12192 | 6:9,103,020-9,107,907 | + | - | CX6g044279 | LOC_Os06g22300 | Os06g0328650 | - | Detail |
| C2H6g28603 | 6:9,108,532-9,109,735 | - | C1H6g19074 | CX6g045574 | LOC_Os06g19360 | Os06g0297300 | - | Detail |
| C2H6g11069 | 6:9,112,729-9,115,423 | - | C1H6g03909 | CX6g042746 | - | - | - | Detail |
| C2H6g14889 | 6:9,121,492-9,124,413 | + | C1H6g19409 | CX6g042859 | LOC_Os06g19370 | Os06g0297400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g013436 | 11:19,518,970-19,519,413 | - | C1H11g09030 | C2H11g18715 | LOC_Os11g37280 | Os11g0582500 | OSC6, Osc6, Osg6B, OsG6B, OsLTPG25, OsLTPg25, OsLtpVII.1, Os C6, C6 | Detail |
| CX11g013075 | 11:19,522,963-19,523,991 | + | C1H11g28092 | C2H11g08283 | LOC_Os11g37270 | Os11g0582400 | - | Detail |
| CX11g011204 | 11:19,525,787-19,532,706 | - | C1H11g08738 | C2H11g29225 | LOC_Os11g37260 | Os11g0582300 | - | Detail |
| CX11g014633 | 11:19,540,456-19,542,497 | + | C1H11g21581 | C2H11g01637 | LOC_Os11g37230 | Os11g0582100 | - | Detail |
| CX11g014127 | 11:19,544,245-19,547,526 | + | C1H11g25944 | C2H11g25233 | LOC_Os11g37210 | Os11g0582000 | - | Detail |
| CX11g012664 | 11:19,548,279-19,551,480 | - | C1H11g06517 | C2H11g21820 | LOC_Os11g37200 | Os11g0581900 | - | Detail |
| CX11g013112 | 11:19,574,243-19,577,465 | + | C1H11g29379 | C2H11g30019 | LOC_Os11g37510 | Os11g0585700 | - | Detail |
| CX11g014074 | 11:19,581,753-19,582,223 | + | - | - | - | - | - | Detail |
| CX11g014040 | 11:19,586,612-19,590,894 | + | C1H11g15811 | C2H11g02296 | LOC_Os11g37520 | Os11g0585900 | - | Detail |
| CX11g012778 | 11:19,597,429-19,610,678 | + | C1H11g28872 | C2H11g07928 | LOC_Os11g37540 | Os11g0586100 | Xa46(t) | Detail |
| CX11g014801 | 11:19,611,334-19,612,333 | - | C1H11g05180 | C2H11g29167 | LOC_Os11g37550 | Os11g0586200 | - | Detail |
| CX11g014870 | 11:19,613,274-19,616,493 | - | C1H11g02737 | C2H11g27585 | LOC_Os11g37560 | Os11g0586300 | OsLESV, FLO9 | Detail |
| CX11g013495 | 11:19,623,787-19,624,194 | + | - | - | - | - | - | Detail |
| CX11g014024 | 11:19,641,041-19,641,430 | - | - | - | - | - | - | Detail |
| CX11g013990 | 11:19,642,673-19,642,840 | + | - | - | - | - | - | Detail |
| CX11g011857 | 11:19,650,886-19,651,101 | + | C1H5g25143 | C2H5g00525 | LOC_Os05g50600 | Os05g0582800 | - | Detail |
| CX11g013558 | 11:19,652,305-19,652,472 | - | - | - | - | - | - | Detail |
| CX11g011253 | 11:19,674,871-19,675,062 | - | - | - | - | - | - | Detail |
| CX11g011943 | 11:19,741,230-19,744,276 | + | C1H11g06719 | C2H11g13343 | LOC_Os11g37640 | Os11g0586900 | - | Detail |
| CX11g012852 | 11:19,746,659-19,752,347 | + | C1H11g31000 | C2H11g29893 | - | Os11g0587000 | - | Detail |