| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g29971 | 6:13,344,968-13,368,122 | - | C2H6g29278 | CX6g044904 | LOC_Os06g26234 | Os06g0367100 | - | Detail |
| C1H6g25214 | 6:13,391,891-13,397,211 | - | - | - | - | - | - | Detail |
| C1H6g28213 | 6:13,499,281-13,503,347 | + | C2H6g04544 | - | - | - | - | Detail |
| C1H6g17724 | 6:13,536,215-13,537,418 | - | C2H6g23106 | - | - | - | - | Detail |
| C1H6g28565 | 6:13,557,695-13,568,424 | - | C2H6g26013 | CX6g042889 | LOC_Os06g24594 | Os06g0353400 | - | Detail |
| C1H6g21270 | 6:13,637,430-13,646,230 | - | C2H6g10356 | CX6g041646 | LOC_Os06g24704 | Os06g0354500 | OsACX3 | Detail |
| C1H6g21464 | 6:13,660,953-13,665,940 | + | C2H6g29551 | CX6g044053 | LOC_Os06g24730 | Os06g0354700 | - | Detail |
| C1H6g25039 | 6:13,800,535-13,801,363 | + | C2H6g08388 | CX6g042639 | LOC_Os06g25240 | - | - | Detail |
| C1H6g13854 | 6:13,804,041-13,807,183 | + | C2H6g13221 | CX6g043468 | LOC_Os06g25250 | Os06g0358800 | - | Detail |
| C1H6g01270 | 6:13,863,543-13,864,914 | - | C2H6g15929 | CX6g045429 | LOC_Os06g25294 | Os06g0359400 | - | Detail |
| C1H6g23788 | 6:13,906,067-13,907,873 | - | C2H6g21208 | CX6g042362 | LOC_Os06g25439 | Os06g0360300 | - | Detail |
| C1H6g04499 | 6:13,920,484-13,922,083 | - | C2H6g07520 | CX6g044019 | - | Os06g0360300 | - | Detail |
| C1H6g08345 | 6:13,923,268-13,928,359 | + | C2H6g11655 | CX6g045318 | - | - | - | Detail |
| C1H6g08979 | 6:13,931,289-13,931,727 | - | C2H6g03737 | CX6g041898 | LOC_Os06g25470 | - | - | Detail |
| C1H6g25558 | 6:13,935,594-13,935,872 | - | C2H6g03737 | CX6g041898 | - | - | - | Detail |
| C1H6g24414 | 6:13,940,642-13,942,267 | - | C2H6g06829 | - | - | - | - | Detail |
| C1H6g20711 | 6:13,953,181-13,953,938 | + | - | - | - | - | - | Detail |
| C1H6g24948 | 6:13,960,380-13,960,926 | - | C2H1g05129 | CX1g000225 | LOC_Os09g38755 | Os09g0560450 | - | Detail |
| C1H6g19509 | 6:13,962,699-13,963,045 | + | - | - | - | - | - | Detail |
| C1H6g02594 | 6:13,973,092-13,973,808 | - | C2H6g05138 | CX6g044189 | LOC_Os01g09320 | Os01g0188400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g013436 | 11:19,518,970-19,519,413 | - | C1H11g09030 | C2H11g18715 | LOC_Os11g37280 | Os11g0582500 | OSC6, Osc6, Osg6B, OsG6B, OsLTPG25, OsLTPg25, OsLtpVII.1, Os C6, C6 | Detail |
| CX11g013075 | 11:19,522,963-19,523,991 | + | C1H11g28092 | C2H11g08283 | LOC_Os11g37270 | Os11g0582400 | - | Detail |
| CX11g011204 | 11:19,525,787-19,532,706 | - | C1H11g08738 | C2H11g29225 | LOC_Os11g37260 | Os11g0582300 | - | Detail |
| CX11g014633 | 11:19,540,456-19,542,497 | + | C1H11g21581 | C2H11g01637 | LOC_Os11g37230 | Os11g0582100 | - | Detail |
| CX11g014127 | 11:19,544,245-19,547,526 | + | C1H11g25944 | C2H11g25233 | LOC_Os11g37210 | Os11g0582000 | - | Detail |
| CX11g012664 | 11:19,548,279-19,551,480 | - | C1H11g06517 | C2H11g21820 | LOC_Os11g37200 | Os11g0581900 | - | Detail |
| CX11g013112 | 11:19,574,243-19,577,465 | + | C1H11g29379 | C2H11g30019 | LOC_Os11g37510 | Os11g0585700 | - | Detail |
| CX11g014074 | 11:19,581,753-19,582,223 | + | - | - | - | - | - | Detail |
| CX11g014040 | 11:19,586,612-19,590,894 | + | C1H11g15811 | C2H11g02296 | LOC_Os11g37520 | Os11g0585900 | - | Detail |
| CX11g012778 | 11:19,597,429-19,610,678 | + | C1H11g28872 | C2H11g07928 | LOC_Os11g37540 | Os11g0586100 | Xa46(t) | Detail |
| CX11g014801 | 11:19,611,334-19,612,333 | - | C1H11g05180 | C2H11g29167 | LOC_Os11g37550 | Os11g0586200 | - | Detail |
| CX11g014870 | 11:19,613,274-19,616,493 | - | C1H11g02737 | C2H11g27585 | LOC_Os11g37560 | Os11g0586300 | OsLESV, FLO9 | Detail |
| CX11g013495 | 11:19,623,787-19,624,194 | + | - | - | - | - | - | Detail |
| CX11g014024 | 11:19,641,041-19,641,430 | - | - | - | - | - | - | Detail |
| CX11g013990 | 11:19,642,673-19,642,840 | + | - | - | - | - | - | Detail |
| CX11g011857 | 11:19,650,886-19,651,101 | + | C1H5g25143 | C2H5g00525 | LOC_Os05g50600 | Os05g0582800 | - | Detail |
| CX11g013558 | 11:19,652,305-19,652,472 | - | - | - | - | - | - | Detail |
| CX11g011253 | 11:19,674,871-19,675,062 | - | - | - | - | - | - | Detail |
| CX11g011943 | 11:19,741,230-19,744,276 | + | C1H11g06719 | C2H11g13343 | LOC_Os11g37640 | Os11g0586900 | - | Detail |
| CX11g012852 | 11:19,746,659-19,752,347 | + | C1H11g31000 | C2H11g29893 | - | Os11g0587000 | - | Detail |