| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g06770 | 2:9,086,090-9,092,576 | - | C1H2g04839 | CX2g020121 | LOC_Os02g17460 | Os02g0274600 | - | Detail |
| C2H2g25557 | 2:9,094,416-9,095,481 | + | C1H2g13080 | - | - | - | - | Detail |
| C2H2g12255 | 2:9,097,550-9,100,200 | + | C1H2g13080 | CX2g019862 | LOC_Os02g17470 | Os02g0274700 | - | Detail |
| C2H2g07148 | 2:9,111,459-9,118,310 | + | C1H2g20851 | CX2g020679 | LOC_Os02g17500 | Os02g0274900 | - | Detail |
| C2H2g16988 | 2:9,123,672-9,124,927 | + | C1H2g27766 | CX2g021332 | LOC_Os02g17520 | Os02g0275100 | - | Detail |
| C2H2g25493 | 2:9,125,762-9,131,981 | - | C1H2g18414 | CX2g022654 | LOC_Os02g17534 | Os02g0275200 | - | Detail |
| C2H2g12406 | 2:9,138,853-9,140,072 | + | C1H2g18414 | CX2g022654 | LOC_Os02g17590 | - | - | Detail |
| C2H2g19414 | 2:9,144,370-9,146,293 | + | C1H2g18414 | CX2g022452 | LOC_Os02g17534 | Os02g0275200 | - | Detail |
| C2H2g11418 | 2:9,153,298-9,161,883 | - | C1H2g28570 | CX2g024094 | LOC_Os02g17620 | Os02g0276200 | - | Detail |
| C2H2g13253 | 2:9,188,438-9,191,184 | - | C1H2g09318 | CX2g019729 | LOC_Os02g17640 | Os02g0276400 | - | Detail |
| C2H2g02640 | 2:9,192,146-9,200,452 | - | C1H2g06211 | CX2g023106 | LOC_Os02g17650 | Os02g0276500 | OsVTE1 | Detail |
| C2H2g17601 | 2:9,224,532-9,226,293 | - | - | - | - | - | - | Detail |
| C2H2g21214 | 2:9,227,200-9,234,095 | - | C1H2g04949 | CX2g020993 | LOC_Os02g17680 | Os02g0276900 | - | Detail |
| C2H2g16961 | 2:9,244,502-9,246,511 | - | - | - | - | - | - | Detail |
| C2H2g07248 | 2:9,245,242-9,247,742 | + | C1H2g26261 | CX2g020060 | LOC_Os11g06800 | Os02g0231600 | - | Detail |
| C2H2g23233 | 2:9,251,488-9,256,684 | + | C1H2g06748 | CX2g023495 | LOC_Os02g17700 | Os02g0277600 | - | Detail |
| C2H2g21422 | 2:9,257,574-9,260,172 | - | C1H2g21417 | CX2g019451 | LOC_Os02g17710 | Os02g0277700 | - | Detail |
| C2H2g09294 | 2:9,267,786-9,272,819 | + | C1H2g04601 | CX2g022207 | LOC_Os02g17760 | Os02g0278400 | - | Detail |
| C2H2g18932 | 2:9,270,435-9,271,883 | - | - | - | - | Os02g0278450 | - | Detail |
| C2H2g03135 | 2:9,276,565-9,287,809 | - | C1H2g04831 | CX2g024821 | LOC_Os02g17780 | Os02g0278700 | OsCPS1, OsCPS1<sub>ent</sub> | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g014856 | 11:18,299,257-18,299,430 | - | - | - | - | Os02g0188201 | - | Detail |
| CX11g013097 | 11:18,303,925-18,304,941 | - | - | C2H11g25709 | LOC_Os11g35080 | Os11g0552500 | - | Detail |
| CX11g011120 | 11:18,308,484-18,313,021 | - | C1H11g12928 | C2H11g18586 | LOC_Os11g35090 | Os11g0552600 | - | Detail |
| CX11g013566 | 11:18,379,761-18,380,087 | - | - | - | - | - | - | Detail |
| CX11g011017 | 11:18,384,165-18,384,623 | + | C1H11g22003 | C2H11g26921 | LOC_Os11g35310 | Os11g0557000 | - | Detail |
| CX11g011852 | 11:18,392,042-18,396,239 | - | C1H11g29617 | C2H11g08971 | LOC_Os11g35320 | Os11g0557400 | - | Detail |
| CX11g011549 | 11:18,398,765-18,400,795 | + | C1H11g04891 | C2H11g27526 | LOC_Os11g35330 | Os11g0557500 | - | Detail |
| CX11g014004 | 11:18,403,067-18,405,056 | + | C1H11g21998 | C2H11g10892 | LOC_Os11g35340 | Os11g0557700 | - | Detail |
| CX11g012576 | 11:18,406,535-18,406,867 | - | - | C2H11g16120 | LOC_Os11g35350 | Os11g0557800 | - | Detail |
| CX11g013992 | 11:18,411,662-18,413,316 | + | C1H11g19348 | C2H11g25464 | LOC_Os11g35360 | Os11g0557900 | - | Detail |
| CX11g014351 | 11:18,414,319-18,416,766 | - | C1H11g13506 | C2H11g23132 | LOC_Os11g35390 | Os11g0558200 | OsMYB4P, Os2R_MYB90 | Detail |
| CX11g011544 | 11:18,423,633-18,429,461 | + | C1H11g17451 | C2H11g09648 | LOC_Os11g35400 | Os11g0558300 | - | Detail |
| CX11g012177 | 11:18,430,116-18,433,202 | - | C1H11g21952 | C2H11g11667 | LOC_Os11g35410 | Os11g0558400 | - | Detail |
| CX11g010967 | 11:18,435,930-18,436,536 | + | C1H11g29003 | C2H11g10617 | LOC_Os11g35420 | - | - | Detail |
| CX11g011668 | 11:18,438,745-18,439,729 | + | C1H11g29003 | C2H11g10617 | LOC_Os11g35425 | Os11g0558500 | - | Detail |
| CX11g013066 | 11:18,442,514-18,444,431 | - | C1H11g28670 | C2H11g16103 | LOC_Os11g35430 | - | - | Detail |
| CX11g014309 | 11:18,445,273-18,445,872 | - | - | - | - | - | - | Detail |
| CX11g012651 | 11:18,452,173-18,454,992 | - | C1H11g17829 | C2H11g26436 | LOC_Os11g35580 | Os11g0678400 | - | Detail |
| CX11g014477 | 11:18,468,929-18,469,962 | - | - | - | - | - | - | Detail |
| CX11g014577 | 11:18,510,420-18,510,729 | - | - | - | LOC_Os11g39254 | Os11g0559533 | - | Detail |