| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g09690 | 1:5,646,191-5,652,258 | + | C2H1g00290 | CX1g005289 | LOC_Os01g11860 | Os01g0217500 | - | Detail |
| C1H1g24673 | 1:5,655,098-5,657,830 | + | C2H1g04999 | CX1g006272 | LOC_Os01g11880 | Os01g0217800 | - | Detail |
| C1H1g21326 | 1:5,666,351-5,678,186 | + | C2H1g26585 | CX1g006867 | LOC_Os01g11900 | Os01g0218032 | ROS1A, ROS1a, OsROS1, TA2 | Detail |
| C1H1g12724 | 1:5,686,581-5,687,544 | + | C2H1g12652 | CX1g003932 | LOC_Os01g11910 | Os01g0218100 | - | Detail |
| C1H1g09961 | 1:5,697,241-5,702,329 | + | C2H1g17909 | CX1g004539 | LOC_Os01g11920 | Os01g0218200 | - | Detail |
| C1H1g30290 | 1:5,714,019-5,719,150 | + | C2H1g10690 | CX1g000608 | LOC_Os01g11940 | Os01g0218500 | - | Detail |
| C1H1g21863 | 1:5,720,849-5,726,981 | - | C2H1g22932 | CX1g003540 | LOC_Os01g11946 | Os01g0218700 | - | Detail |
| C1H1g28664 | 1:5,727,357-5,740,639 | - | C2H1g17937 | CX1g000915 | LOC_Os01g11960 | Os01g0218900 | - | Detail |
| C1H1g00514 | 1:5,752,538-5,753,281 | + | C2H1g09244 | CX1g004702 | LOC_Os01g11970 | Os01g0219000 | - | Detail |
| C1H1g27900 | 1:5,754,392-5,756,984 | + | C2H1g22718 | CX1g003171 | LOC_Os01g11980 | Os01g0219100 | - | Detail |
| C1H1g26992 | 1:5,757,879-5,760,734 | + | C2H1g24979 | CX1g000508 | LOC_Os01g11990 | Os01g0219200 | ZYGO1 | Detail |
| C1H1g22028 | 1:5,770,051-5,770,540 | + | C2H1g07180 | CX1g005007 | LOC_Os01g12020 | Os01g0219500 | OsLTPL18 | Detail |
| C1H1g09843 | 1:5,770,963-5,773,415 | - | C2H1g00052 | CX1g005138 | LOC_Os01g12030 | Os01g0219600 | - | Detail |
| C1H1g29203 | 1:5,784,452-5,785,325 | - | C2H1g03412 | CX1g005599 | LOC_Os01g12070 | Os01g0220100 | OsCel9A | Detail |
| C1H1g27823 | 1:5,787,226-5,790,470 | - | C2H1g03412 | CX1g005599 | LOC_Os01g12070 | Os01g0220100 | OsCel9A | Detail |
| C1H1g03057 | 1:5,794,359-5,799,394 | - | C2H1g01177 | CX1g001222 | LOC_Os01g12080 | Os01g0220200 | - | Detail |
| C1H1g21223 | 1:5,806,314-5,809,542 | + | C2H1g26925 | CX1g003024 | LOC_Os01g12090 | Os01g0220300 | - | Detail |
| C1H1g15416 | 1:5,810,071-5,810,571 | - | C2H1g24533 | - | LOC_Os01g12100 | Os01g0220400 | - | Detail |
| C1H1g25550 | 1:5,814,056-5,815,182 | - | C2H1g24521 | CX1g004887 | LOC_Os01g12110 | Os01g0220500 | - | Detail |
| C1H1g19821 | 1:5,830,205-5,830,851 | + | C2H1g00971 | CX1g004493 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g014856 | 11:18,299,257-18,299,430 | - | - | - | - | Os02g0188201 | - | Detail |
| CX11g013097 | 11:18,303,925-18,304,941 | - | - | C2H11g25709 | LOC_Os11g35080 | Os11g0552500 | - | Detail |
| CX11g011120 | 11:18,308,484-18,313,021 | - | C1H11g12928 | C2H11g18586 | LOC_Os11g35090 | Os11g0552600 | - | Detail |
| CX11g013566 | 11:18,379,761-18,380,087 | - | - | - | - | - | - | Detail |
| CX11g011017 | 11:18,384,165-18,384,623 | + | C1H11g22003 | C2H11g26921 | LOC_Os11g35310 | Os11g0557000 | - | Detail |
| CX11g011852 | 11:18,392,042-18,396,239 | - | C1H11g29617 | C2H11g08971 | LOC_Os11g35320 | Os11g0557400 | - | Detail |
| CX11g011549 | 11:18,398,765-18,400,795 | + | C1H11g04891 | C2H11g27526 | LOC_Os11g35330 | Os11g0557500 | - | Detail |
| CX11g014004 | 11:18,403,067-18,405,056 | + | C1H11g21998 | C2H11g10892 | LOC_Os11g35340 | Os11g0557700 | - | Detail |
| CX11g012576 | 11:18,406,535-18,406,867 | - | - | C2H11g16120 | LOC_Os11g35350 | Os11g0557800 | - | Detail |
| CX11g013992 | 11:18,411,662-18,413,316 | + | C1H11g19348 | C2H11g25464 | LOC_Os11g35360 | Os11g0557900 | - | Detail |
| CX11g014351 | 11:18,414,319-18,416,766 | - | C1H11g13506 | C2H11g23132 | LOC_Os11g35390 | Os11g0558200 | OsMYB4P, Os2R_MYB90 | Detail |
| CX11g011544 | 11:18,423,633-18,429,461 | + | C1H11g17451 | C2H11g09648 | LOC_Os11g35400 | Os11g0558300 | - | Detail |
| CX11g012177 | 11:18,430,116-18,433,202 | - | C1H11g21952 | C2H11g11667 | LOC_Os11g35410 | Os11g0558400 | - | Detail |
| CX11g010967 | 11:18,435,930-18,436,536 | + | C1H11g29003 | C2H11g10617 | LOC_Os11g35420 | - | - | Detail |
| CX11g011668 | 11:18,438,745-18,439,729 | + | C1H11g29003 | C2H11g10617 | LOC_Os11g35425 | Os11g0558500 | - | Detail |
| CX11g013066 | 11:18,442,514-18,444,431 | - | C1H11g28670 | C2H11g16103 | LOC_Os11g35430 | - | - | Detail |
| CX11g014309 | 11:18,445,273-18,445,872 | - | - | - | - | - | - | Detail |
| CX11g012651 | 11:18,452,173-18,454,992 | - | C1H11g17829 | C2H11g26436 | LOC_Os11g35580 | Os11g0678400 | - | Detail |
| CX11g014477 | 11:18,468,929-18,469,962 | - | - | - | - | - | - | Detail |
| CX11g014577 | 11:18,510,420-18,510,729 | - | - | - | LOC_Os11g39254 | Os11g0559533 | - | Detail |