| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g06482 | 2:29,371,707-29,373,467 | + | C1H2g24237 | CX2g020266 | LOC_Os02g52480 | Os02g0762400 | KRP1, OsiICK1, Orysa;KRP1, OrysaICK1, Orysa;ICK1, CDKI | Detail |
| C2H2g14994 | 2:29,379,968-29,380,435 | - | - | CX2g020064 | LOC_Os02g52490 | Os02g0762600 | SGL1 | Detail |
| C2H2g29446 | 2:29,385,573-29,394,313 | - | C1H2g04159 | CX2g022518 | LOC_Os02g52510 | Os02g0762800 | OsRad54 | Detail |
| C2H2g01751 | 2:29,397,002-29,397,304 | - | - | CX2g023245 | LOC_Os02g52540 | - | - | Detail |
| C2H2g11954 | 2:29,401,275-29,402,154 | + | C1H2g10187 | CX2g023141 | LOC_Os02g52550 | Os02g0763000 | OsCNR1, TGW2, OsFWL1 | Detail |
| C2H2g00538 | 2:29,415,549-29,416,080 | + | C1H2g21759 | - | - | - | - | Detail |
| C2H2g18956 | 2:29,419,129-29,422,357 | + | C1H2g09761 | CX2g024148 | LOC_Os02g52560 | Os02g0763200 | - | Detail |
| C2H2g03175 | 2:29,423,273-29,426,274 | + | C1H2g15844 | CX2g024148 | LOC_Os02g52590 | Os02g0763800 | - | Detail |
| C2H2g23310 | 2:29,426,521-29,426,997 | + | C1H2g15324 | - | LOC_Os02g52610 | Os02g0763900 | - | Detail |
| C2H2g02605 | 2:29,429,194-29,432,334 | + | C1H2g26295 | CX2g023343 | LOC_Os02g52610 | Os02g0763900 | - | Detail |
| C2H2g18172 | 2:29,435,564-29,438,153 | + | C1H2g14291 | CX2g019855 | LOC_Os02g52630 | Os02g0764200 | - | Detail |
| C2H2g07475 | 2:29,442,236-29,444,534 | + | C1H2g16896 | CX2g023343 | LOC_Os02g52640 | Os02g0764400 | - | Detail |
| C2H2g26785 | 2:29,444,959-29,446,785 | - | C1H2g16728 | CX2g022219 | LOC_Os02g52650 | Os02g0764500 | - | Detail |
| C2H2g22917 | 2:29,448,988-29,449,743 | - | C1H2g23870 | CX2g021656 | LOC_Os02g52670 | Os02g0764700 | OsERF103 | Detail |
| C2H2g26543 | 2:29,462,389-29,463,967 | + | C1H2g10581 | CX2g018991 | LOC_Os02g52700 | Os02g0765400 | Amy1C | Detail |
| C2H2g29404 | 2:29,466,319-29,467,913 | - | C1H2g08973 | CX2g021489 | LOC_Os02g52710 | Os02g0765600 | AMY1A, Amy1A/C*(RAmy1A/C), alpha Amy7, AMY1.1, Amy1A, RAmy1A/C, Amy1A/C*, Amy1, Amy1A_C, OsAmy1A, alphaAmy7-C, RAmy1A | Detail |
| C2H2g24763 | 2:29,471,454-29,472,131 | - | C1H2g26635 | CX2g019501 | LOC_Os02g52720 | Os02g0765800 | - | Detail |
| C2H2g20003 | 2:29,474,844-29,478,669 | - | C1H2g13987 | CX2g022397 | LOC_Os02g52744 | Os02g0766000 | - | Detail |
| C2H2g16702 | 2:29,485,155-29,485,984 | + | C1H2g23770 | CX2g019269 | LOC_Os02g52770 | Os02g0766600 | - | Detail |
| C2H2g14916 | 2:29,487,761-29,492,896 | - | C1H2g16420 | CX2g021391 | LOC_Os02g52780 | Os02g0766700 | BZIP23, OsbZIP23, OsAREB1, OsABF2, Osbzip23, OsAREB2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g011501 | 11:17,927,230-17,932,633 | - | C1H11g02103 | C2H11g01819 | LOC_Os11g34180 | Os11g0544500 | - | Detail |
| CX11g011448 | 11:17,936,641-17,943,060 | + | C1H11g30920 | C2H11g00305 | LOC_Os11g34190 | Os11g0544600 | - | Detail |
| CX11g014690 | 11:17,944,679-17,947,911 | + | C1H11g27494 | C2H11g18307 | LOC_Os11g34200 | Os11g0544700 | OsDrAp1 | Detail |
| CX11g013605 | 11:17,948,910-17,952,613 | - | C1H11g15105 | C2H11g08032 | LOC_Os11g34210 | Os11g0544800 | GATB, OsGatB, GatB | Detail |
| CX11g014594 | 11:17,953,013-17,953,222 | + | - | - | - | Os11g0544866 | - | Detail |
| CX11g011818 | 11:17,954,828-17,957,272 | - | C1H11g06148 | C2H11g01963 | LOC_Os11g34230 | Os11g0544900 | - | Detail |
| CX11g014837 | 11:17,990,864-17,993,700 | + | C1H11g29024 | C2H11g22664 | LOC_Os11g34270 | Os11g0545300 | OsSpo11-5 | Detail |
| CX11g013081 | 11:18,015,312-18,015,539 | + | - | - | - | - | - | Detail |
| CX11g012033 | 11:18,029,340-18,036,835 | - | C1H11g27853 | C2H11g09476 | LOC_Os11g34310 | Os11g0545700 | - | Detail |
| CX11g011277 | 11:18,039,094-18,044,728 | - | C1H11g29595 | C2H11g07840 | LOC_Os11g34320 | Os11g0545800 | - | Detail |
| CX11g012629 | 11:18,046,699-18,051,147 | + | C1H11g24653 | C2H11g22777 | LOC_Os11g34350 | Os11g0546000 | - | Detail |
| CX11g013362 | 11:18,053,077-18,056,454 | + | C1H11g03059 | C2H11g01368 | LOC_Os11g34360 | Os11g0546100 | - | Detail |
| CX11g012022 | 11:18,057,934-18,059,205 | - | C1H11g12310 | C2H11g09210 | LOC_Os11g34364 | Os11g0546200 | - | Detail |
| CX11g012292 | 11:18,060,844-18,063,895 | - | C1H11g15689 | C2H11g00851 | LOC_Os11g34370 | Os11g0546300 | - | Detail |
| CX11g014915 | 11:18,078,579-18,080,069 | - | C1H11g07026 | C2H11g21181 | LOC_Os11g34440 | Os11g0546600 | - | Detail |
| CX11g014814 | 11:18,082,689-18,085,201 | + | C1H11g24104 | C2H11g19139 | LOC_Os11g34450 | Os11g0546900 | OsGF14d | Detail |
| CX11g014860 | 11:18,086,911-18,091,457 | - | C1H11g13650 | C2H11g24153 | LOC_Os11g34460 | Os11g0547000 | - | Detail |
| CX11g013995 | 11:18,115,868-18,117,403 | - | - | - | LOC_Os11g35140 | - | - | Detail |
| CX11g014975 | 11:18,124,386-18,126,279 | + | C1H11g19158 | C2H11g28112 | LOC_Os11g34624 | Os11g0549300 | - | Detail |
| CX11g010885 | 11:18,127,900-18,129,781 | - | C1H11g11230 | C2H11g01030 | LOC_Os11g34680 | Os11g0549537 | - | Detail |