| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g23743 | 1:5,305,835-5,306,335 | - | - | CX1g004127 | LOC_Os01g11240 | Os01g0210600 | - | Detail |
| C2H1g02275 | 1:5,314,040-5,318,157 | + | C1H1g15458 | - | - | Os01g0210750 | - | Detail |
| C2H1g05349 | 1:5,315,079-5,318,927 | - | C1H1g12886 | CX1g002610 | LOC_Os01g11250 | Os01g0210700 | KAT2, OsKAT2 | Detail |
| C2H1g07302 | 1:5,324,139-5,328,648 | + | C1H1g30027 | CX1g004526 | LOC_Os01g11260 | Os01g0210800 | - | Detail |
| C2H1g29439 | 1:5,330,062-5,331,597 | - | C1H1g11954 | CX1g005082 | LOC_Os01g11270 | Os01g0210900 | - | Detail |
| C2H1g23127 | 1:5,353,535-5,355,070 | - | C1H1g11954 | CX1g000827 | LOC_Os01g11300 | Os01g0211200 | - | Detail |
| C2H1g26875 | 1:5,363,256-5,364,782 | - | C1H1g11954 | CX1g005082 | LOC_Os01g11340 | Os01g0211600 | - | Detail |
| C2H1g05400 | 1:5,376,702-5,378,036 | - | C1H1g07906 | - | LOC_Os01g11350 | Os01g0211800 | - | Detail |
| C2H1g30364 | 1:5,392,325-5,404,996 | + | C1H1g25024 | CX1g006413 | LOC_Os01g11370 | Os01g0212100 | - | Detail |
| C2H1g07400 | 1:5,413,173-5,418,384 | + | C1H1g24516 | CX1g004990 | LOC_Os01g11414 | Os01g0212400 | - | Detail |
| C2H1g07852 | 1:5,419,207-5,420,699 | - | C1H1g10197 | CX1g007192 | LOC_Os01g11430 | Os01g0212500 | OsTIE1 | Detail |
| C2H1g19820 | 1:5,428,807-5,429,451 | - | - | - | - | - | - | Detail |
| C2H1g19922 | 1:5,447,110-5,450,771 | - | C1H1g26340 | CX1g001182 | LOC_Os01g11460 | Os01g0212700 | - | Detail |
| C2H1g21565 | 1:5,452,260-5,452,775 | - | C1H1g26340 | CX1g001182 | LOC_Os01g11480 | Os01g0673900 | - | Detail |
| C2H1g00533 | 1:5,455,349-5,456,053 | - | C1H1g22295 | CX1g001182 | LOC_Os01g11490 | Os01g0213100 | - | Detail |
| C2H1g20430 | 1:5,459,163-5,459,843 | - | C1H1g24050 | CX1g001182 | LOC_Os01g11500 | Os01g0213100 | - | Detail |
| C2H1g03845 | 1:5,462,634-5,464,451 | + | - | CX1g000251 | LOC_Os01g11510 | Os01g0213300 | - | Detail |
| C2H1g20281 | 1:5,470,874-5,471,578 | - | C1H1g26340 | CX1g001182 | LOC_Os01g11520 | Os01g0213400 | - | Detail |
| C2H1g27187 | 1:5,486,799-5,488,694 | - | C1H1g28036 | CX1g004394 | LOC_Os01g11550 | Os01g0213800 | OsPCF5, PCF5, OsTCP1, OsTCP1/PCF5 | Detail |
| C2H1g17634 | 1:5,519,687-5,522,015 | - | C1H1g17492 | CX1g003866 | LOC_Os01g11570 | Os01g0214200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005969 | 1:6,404,599-6,411,282 | - | C1H1g01831 | C2H1g05903 | LOC_Os01g12930 | Os01g0229700 | - | Detail |
| CX1g000942 | 1:6,412,802-6,414,929 | - | C1H1g16126 | C2H1g00149 | LOC_Os01g12940 | Os01g0229800 | - | Detail |
| CX1g003754 | 1:6,425,706-6,432,090 | - | C1H1g06612 | C2H1g27747 | LOC_Os01g13000 | Os01g0230200 | OsbHLH074 | Detail |
| CX1g006403 | 1:6,432,296-6,432,634 | - | C1H1g06612 | - | LOC_Os01g13000 | Os01g0230200 | OsbHLH074 | Detail |
| CX1g003298 | 1:6,438,428-6,439,792 | - | - | - | LOC_Os01g11310 | - | - | Detail |
| CX1g000579 | 1:6,440,388-6,441,689 | - | C1H1g09261 | C2H1g01170 | LOC_Os01g15700 | - | - | Detail |
| CX1g006768 | 1:6,461,775-6,464,861 | + | C1H1g30420 | C2H1g20912 | LOC_Os01g13030 | Os01g0231000 | - | Detail |
| CX1g006093 | 1:6,472,896-6,473,126 | + | - | - | - | Os07g0616100 | - | Detail |
| CX1g003325 | 1:6,474,619-6,474,939 | - | - | - | LOC_Os01g09110 | - | - | Detail |
| CX1g002350 | 1:6,477,715-6,488,282 | + | C1H1g30529 | C2H1g03048 | LOC_Os01g13060 | Os01g0231500 | - | Detail |
| CX1g004775 | 1:6,493,232-6,495,264 | + | C1H1g25386 | C2H1g22889 | LOC_Os01g13070 | Os01g0231600 | - | Detail |
| CX1g000758 | 1:6,496,636-6,497,850 | - | C1H1g25919 | C2H1g30242 | LOC_Os01g13080 | Os01g0231700 | OsP3B | Detail |
| CX1g004219 | 1:6,505,458-6,510,445 | + | C1H1g05372 | C2H1g07330 | LOC_Os01g13100 | Os01g0231900 | - | Detail |
| CX1g004133 | 1:6,514,536-6,515,372 | + | C1H1g03374 | C2H1g24942 | LOC_Os01g13120 | Os01g0232000 | - | Detail |
| CX1g002510 | 1:6,517,823-6,518,744 | + | C1H1g10298 | C2H1g00821 | LOC_Os01g13130 | Os01g0232100 | - | Detail |
| CX1g006999 | 1:6,520,220-6,520,468 | + | - | - | LOC_Os01g08250 | - | - | Detail |
| CX1g000243 | 1:6,522,596-6,524,179 | - | C1H1g13448 | C2H1g24807 | LOC_Os01g13140 | Os01g0232200 | - | Detail |
| CX1g004611 | 1:6,540,573-6,547,430 | + | C1H1g18430 | C2H1g00837 | LOC_Os01g13150 | Os01g0232300 | - | Detail |
| CX1g006088 | 1:6,550,738-6,556,428 | + | C1H1g14853 | C2H1g20763 | LOC_Os01g13160 | Os01g0232400 | - | Detail |
| CX1g001297 | 1:6,557,968-6,562,299 | + | C1H1g01258 | C2H1g26519 | LOC_Os01g13170 | Os01g0232500 | - | Detail |