| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g19932 | 2:20,518,073-20,518,918 | + | C2H2g24305 | CX2g024727 | LOC_Os02g36140 | Os02g0570400 | OsDTC1, OsKSL3 | Detail |
| C1H2g28979 | 2:20,522,221-20,523,846 | + | C2H2g13056 | CX2g024727 | LOC_Os02g36140 | Os02g0570400 | OsDTC1, OsKSL3 | Detail |
| C1H2g26519 | 2:20,524,474-20,525,935 | + | C2H2g03370 | CX2g024727 | LOC_Os02g36285 | Os02g0570400 | OsDTC1, OsKSL3 | Detail |
| C1H2g27996 | 2:20,529,855-20,532,739 | + | C2H2g08598 | CX2g019614 | LOC_Os02g36150 | Os02g0570500 | - | Detail |
| C1H2g01402 | 2:20,537,087-20,539,652 | - | C2H2g05039 | CX2g023226 | LOC_Os02g36190 | Os02g0570700 | - | Detail |
| C1H2g21986 | 2:20,545,967-20,550,189 | - | - | - | - | - | - | Detail |
| C1H2g07162 | 2:20,578,454-20,584,791 | + | C2H2g17098 | CX2g021593 | LOC_Os02g36210 | Os02g0571100 | OsCPS2, Os-CPS2, OsCyc2, OsCPS2ent | Detail |
| C1H2g08132 | 2:20,586,835-20,587,890 | - | - | - | - | - | - | Detail |
| C1H2g03952 | 2:20,589,022-20,599,159 | - | C2H2g07065 | CX2g021871 | LOC_Os02g36220 | Os02g0571300 | OsKSL7 | Detail |
| C1H2g22902 | 2:20,617,446-20,619,066 | - | C2H2g07065 | CX2g021871 | LOC_Os02g36264 | Os02g0571800 | OsKSL9 | Detail |
| C1H2g02826 | 2:20,619,508-20,625,671 | - | C2H2g09109 | CX2g021871 | LOC_Os02g36264 | Os02g0571800 | OsKSL9 | Detail |
| C1H2g18768 | 2:20,639,765-20,641,079 | + | C2H2g16141 | CX2g024727 | LOC_Os02g36285 | Os02g0572050 | - | Detail |
| C1H2g17745 | 2:20,647,633-20,648,676 | - | C2H2g09753 | CX2g018873 | LOC_Os02g36320 | Os02g0572300 | - | Detail |
| C1H2g12070 | 2:20,650,475-20,651,894 | - | C2H2g01273 | - | - | Os02g0572300 | - | Detail |
| C1H2g26185 | 2:20,655,118-20,660,193 | - | C2H2g16620 | CX2g023356 | LOC_Os02g36340 | Os02g0572400 | - | Detail |
| C1H2g25932 | 2:20,677,538-20,679,197 | - | C2H2g00545 | CX2g023112 | LOC_Os02g36350 | Os02g0572600 | - | Detail |
| C1H2g10452 | 2:20,688,582-20,691,932 | - | C2H2g01996 | CX2g023654 | LOC_Os02g36360 | Os02g0572900 | - | Detail |
| C1H2g13546 | 2:20,709,852-20,713,652 | + | C2H2g05333 | CX2g018889 | LOC_Os02g36380 | Os02g0573200 | OsCRY1a, OsCRY1, CRY1a, CRY2 | Detail |
| C1H2g14408 | 2:20,714,228-20,719,715 | - | C2H2g01642 | CX2g019460 | LOC_Os02g36390 | Os02g0573300 | - | Detail |
| C1H2g24873 | 2:20,720,518-20,724,732 | - | C2H2g30509 | CX2g024276 | LOC_Os02g36400 | Os02g0573400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005969 | 1:6,404,599-6,411,282 | - | C1H1g01831 | C2H1g05903 | LOC_Os01g12930 | Os01g0229700 | - | Detail |
| CX1g000942 | 1:6,412,802-6,414,929 | - | C1H1g16126 | C2H1g00149 | LOC_Os01g12940 | Os01g0229800 | - | Detail |
| CX1g003754 | 1:6,425,706-6,432,090 | - | C1H1g06612 | C2H1g27747 | LOC_Os01g13000 | Os01g0230200 | OsbHLH074 | Detail |
| CX1g006403 | 1:6,432,296-6,432,634 | - | C1H1g06612 | - | LOC_Os01g13000 | Os01g0230200 | OsbHLH074 | Detail |
| CX1g003298 | 1:6,438,428-6,439,792 | - | - | - | LOC_Os01g11310 | - | - | Detail |
| CX1g000579 | 1:6,440,388-6,441,689 | - | C1H1g09261 | C2H1g01170 | LOC_Os01g15700 | - | - | Detail |
| CX1g006768 | 1:6,461,775-6,464,861 | + | C1H1g30420 | C2H1g20912 | LOC_Os01g13030 | Os01g0231000 | - | Detail |
| CX1g006093 | 1:6,472,896-6,473,126 | + | - | - | - | Os07g0616100 | - | Detail |
| CX1g003325 | 1:6,474,619-6,474,939 | - | - | - | LOC_Os01g09110 | - | - | Detail |
| CX1g002350 | 1:6,477,715-6,488,282 | + | C1H1g30529 | C2H1g03048 | LOC_Os01g13060 | Os01g0231500 | - | Detail |
| CX1g004775 | 1:6,493,232-6,495,264 | + | C1H1g25386 | C2H1g22889 | LOC_Os01g13070 | Os01g0231600 | - | Detail |
| CX1g000758 | 1:6,496,636-6,497,850 | - | C1H1g25919 | C2H1g30242 | LOC_Os01g13080 | Os01g0231700 | OsP3B | Detail |
| CX1g004219 | 1:6,505,458-6,510,445 | + | C1H1g05372 | C2H1g07330 | LOC_Os01g13100 | Os01g0231900 | - | Detail |
| CX1g004133 | 1:6,514,536-6,515,372 | + | C1H1g03374 | C2H1g24942 | LOC_Os01g13120 | Os01g0232000 | - | Detail |
| CX1g002510 | 1:6,517,823-6,518,744 | + | C1H1g10298 | C2H1g00821 | LOC_Os01g13130 | Os01g0232100 | - | Detail |
| CX1g006999 | 1:6,520,220-6,520,468 | + | - | - | LOC_Os01g08250 | - | - | Detail |
| CX1g000243 | 1:6,522,596-6,524,179 | - | C1H1g13448 | C2H1g24807 | LOC_Os01g13140 | Os01g0232200 | - | Detail |
| CX1g004611 | 1:6,540,573-6,547,430 | + | C1H1g18430 | C2H1g00837 | LOC_Os01g13150 | Os01g0232300 | - | Detail |
| CX1g006088 | 1:6,550,738-6,556,428 | + | C1H1g14853 | C2H1g20763 | LOC_Os01g13160 | Os01g0232400 | - | Detail |
| CX1g001297 | 1:6,557,968-6,562,299 | + | C1H1g01258 | C2H1g26519 | LOC_Os01g13170 | Os01g0232500 | - | Detail |