| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g02118 | 12:1,763,630-1,764,689 | + | C2H12g17026 | CX12g015145 | LOC_Os12g04424 | Os12g0138800 | - | Detail |
| C1H12g08849 | 12:1,765,333-1,766,998 | + | C2H12g16805 | CX12g016675 | LOC_Os12g04424 | Os12g0138800 | - | Detail |
| C1H12g04455 | 12:1,767,911-1,773,847 | + | C2H12g26667 | CX12g018579 | LOC_Os12g04440 | Os12g0138900 | - | Detail |
| C1H12g12805 | 12:1,775,015-1,775,635 | + | C2H12g06048 | CX12g018621 | LOC_Os12g04450 | Os12g0143750 | - | Detail |
| C1H12g26225 | 12:1,780,335-1,781,021 | + | C2H12g06048 | CX12g018280 | LOC_Os12g04460 | Os12g0139100 | - | Detail |
| C1H12g06694 | 12:1,789,137-1,793,105 | - | C2H12g06757 | CX12g016143 | LOC_Os12g04480 | Os12g0139300 | OsCPD2, CYP90A4, OsCPD2/CYP90A4 | Detail |
| C1H12g23746 | 12:1,798,012-1,799,620 | + | C2H11g05956 | CX12g018440 | LOC_Os12g04500 | Os12g0139400 | RR10, OsRR10, Rra2, OsRRA2 | Detail |
| C1H12g15530 | 12:1,800,125-1,802,641 | - | C2H12g06221 | CX12g017687 | LOC_Os12g04510 | Os12g0139500 | - | Detail |
| C1H12g28135 | 12:1,804,273-1,808,695 | - | C2H12g02892 | CX12g016258 | LOC_Os12g04520 | Os12g0139600 | - | Detail |
| C1H12g25083 | 12:1,813,032-1,814,411 | - | C2H12g30338 | CX12g018085 | LOC_Os12g04540 | Os12g0139800 | - | Detail |
| C1H12g21714 | 12:1,825,818-1,839,019 | - | C2H12g20924 | CX12g016311 | LOC_Os12g04590 | Os12g0140200 | - | Detail |
| C1H12g30903 | 12:1,844,642-1,845,920 | + | C2H12g29989 | CX12g018613 | LOC_Os12g04640 | Os12g0514000 | OsPLT15 | Detail |
| C1H12g31125 | 12:1,848,426-1,848,941 | + | C2H12g06061 | CX12g018621 | LOC_Os12g04650 | Os12g0140600 | - | Detail |
| C1H12g27391 | 12:1,866,695-1,870,258 | - | C2H12g11552 | CX12g016459 | LOC_Os12g04700 | Os12g0141100 | - | Detail |
| C1H12g26478 | 12:1,886,237-1,886,740 | - | C2H12g27853 | CX12g018041 | LOC_Os12g04720 | - | - | Detail |
| C1H12g21661 | 12:1,894,861-1,895,607 | - | C2H12g26074 | CX12g017803 | LOC_Os12g04740 | Os12g0141500 | - | Detail |
| C1H12g04993 | 12:1,898,563-1,898,938 | - | C2H12g19377 | CX12g017719 | - | Os12g0141600 | - | Detail |
| C1H12g30941 | 12:1,899,187-1,904,587 | - | C2H12g09406 | CX12g017719 | LOC_Os12g04750 | Os12g0141600 | - | Detail |
| C1H12g08865 | 12:1,910,287-1,912,374 | + | - | CX12g015814 | LOC_Os12g04770 | Os12g0141800 | - | Detail |
| C1H12g04512 | 12:1,918,536-1,922,193 | - | C2H12g13165 | CX12g017921 | - | Os12g0141900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005969 | 1:6,404,599-6,411,282 | - | C1H1g01831 | C2H1g05903 | LOC_Os01g12930 | Os01g0229700 | - | Detail |
| CX1g000942 | 1:6,412,802-6,414,929 | - | C1H1g16126 | C2H1g00149 | LOC_Os01g12940 | Os01g0229800 | - | Detail |
| CX1g003754 | 1:6,425,706-6,432,090 | - | C1H1g06612 | C2H1g27747 | LOC_Os01g13000 | Os01g0230200 | OsbHLH074 | Detail |
| CX1g006403 | 1:6,432,296-6,432,634 | - | C1H1g06612 | - | LOC_Os01g13000 | Os01g0230200 | OsbHLH074 | Detail |
| CX1g003298 | 1:6,438,428-6,439,792 | - | - | - | LOC_Os01g11310 | - | - | Detail |
| CX1g000579 | 1:6,440,388-6,441,689 | - | C1H1g09261 | C2H1g01170 | LOC_Os01g15700 | - | - | Detail |
| CX1g006768 | 1:6,461,775-6,464,861 | + | C1H1g30420 | C2H1g20912 | LOC_Os01g13030 | Os01g0231000 | - | Detail |
| CX1g006093 | 1:6,472,896-6,473,126 | + | - | - | - | Os07g0616100 | - | Detail |
| CX1g003325 | 1:6,474,619-6,474,939 | - | - | - | LOC_Os01g09110 | - | - | Detail |
| CX1g002350 | 1:6,477,715-6,488,282 | + | C1H1g30529 | C2H1g03048 | LOC_Os01g13060 | Os01g0231500 | - | Detail |
| CX1g004775 | 1:6,493,232-6,495,264 | + | C1H1g25386 | C2H1g22889 | LOC_Os01g13070 | Os01g0231600 | - | Detail |
| CX1g000758 | 1:6,496,636-6,497,850 | - | C1H1g25919 | C2H1g30242 | LOC_Os01g13080 | Os01g0231700 | OsP3B | Detail |
| CX1g004219 | 1:6,505,458-6,510,445 | + | C1H1g05372 | C2H1g07330 | LOC_Os01g13100 | Os01g0231900 | - | Detail |
| CX1g004133 | 1:6,514,536-6,515,372 | + | C1H1g03374 | C2H1g24942 | LOC_Os01g13120 | Os01g0232000 | - | Detail |
| CX1g002510 | 1:6,517,823-6,518,744 | + | C1H1g10298 | C2H1g00821 | LOC_Os01g13130 | Os01g0232100 | - | Detail |
| CX1g006999 | 1:6,520,220-6,520,468 | + | - | - | LOC_Os01g08250 | - | - | Detail |
| CX1g000243 | 1:6,522,596-6,524,179 | - | C1H1g13448 | C2H1g24807 | LOC_Os01g13140 | Os01g0232200 | - | Detail |
| CX1g004611 | 1:6,540,573-6,547,430 | + | C1H1g18430 | C2H1g00837 | LOC_Os01g13150 | Os01g0232300 | - | Detail |
| CX1g006088 | 1:6,550,738-6,556,428 | + | C1H1g14853 | C2H1g20763 | LOC_Os01g13160 | Os01g0232400 | - | Detail |
| CX1g001297 | 1:6,557,968-6,562,299 | + | C1H1g01258 | C2H1g26519 | LOC_Os01g13170 | Os01g0232500 | - | Detail |