| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g03816 | 1:24,817,159-24,833,117 | - | C1H1g22731 | CX1g004904 | LOC_Os01g48680 | Os01g0678500 | TPC1, OsTPC1, Tpc1, OsCC1 | Detail |
| C2H1g17432 | 1:24,834,344-24,836,347 | + | C1H1g06484 | CX1g001832 | LOC_Os01g48690 | Os01g0678600 | - | Detail |
| C2H1g29587 | 1:24,837,207-24,840,189 | - | C1H1g21202 | CX1g005378 | LOC_Os01g48700 | Os01g0678700 | - | Detail |
| C2H1g22453 | 1:24,843,096-24,846,556 | + | C1H1g29809 | CX1g000800 | - | - | - | Detail |
| C2H1g18621 | 1:24,848,468-24,849,100 | - | C1H1g09148 | CX1g006182 | LOC_Os01g48710 | Os01g0678800 | - | Detail |
| C2H1g02873 | 1:24,857,342-24,865,949 | + | C1H1g01369 | CX1g006519 | LOC_Os01g48720 | Os01g0679000 | - | Detail |
| C2H1g10975 | 1:24,874,515-24,879,080 | + | C1H1g09308 | CX1g004313 | LOC_Os01g48750 | Os01g0679550 | - | Detail |
| C2H1g25010 | 1:24,880,657-24,884,018 | + | C1H1g00895 | CX1g003619 | LOC_Os01g48760 | Os01g0679600 | - | Detail |
| C2H1g04367 | 1:24,884,811-24,887,061 | - | - | CX1g000487 | LOC_Os01g48770 | Os01g0679700 | - | Detail |
| C2H1g01242 | 1:24,898,075-24,904,856 | + | C1H1g15404 | CX1g003718 | LOC_Os01g48790 | Os01g0679900 | - | Detail |
| C2H1g04425 | 1:24,898,169-24,898,621 | - | - | - | - | Os01g0680000 | - | Detail |
| C2H1g18628 | 1:24,914,327-24,915,487 | + | C1H1g14743 | CX1g004327 | LOC_Os01g48800 | Os01g0680200 | OsPUP4, BG3/OsPUP4, BG3 | Detail |
| C2H1g11263 | 1:24,914,489-24,915,503 | - | - | - | - | Os01g0680100 | - | Detail |
| C2H1g09841 | 1:24,929,361-24,932,397 | + | C1H1g08166 | CX1g006918 | LOC_Os01g48810 | Os01g0680400 | - | Detail |
| C2H1g14175 | 1:24,937,054-24,937,968 | + | C1H1g07424 | CX1g002655 | LOC_Os01g48820 | Os01g0680600 | - | Detail |
| C2H1g22016 | 1:24,941,731-24,946,829 | - | C1H1g15834 | CX1g002522 | LOC_Os01g48830 | Os01g0680700 | - | Detail |
| C2H1g19155 | 1:24,955,834-24,959,326 | + | - | - | - | Os01g0680950 | - | Detail |
| C2H1g29263 | 1:24,956,786-24,959,385 | - | C1H1g17992 | CX1g007143 | LOC_Os01g48850 | Os01g0680900 | - | Detail |
| C2H1g05013 | 1:24,961,070-24,966,730 | - | C1H1g20689 | CX1g002388 | LOC_Os01g48874 | Os01g0681000 | - | Detail |
| C2H1g04783 | 1:24,969,619-24,970,164 | + | - | CX6g041804 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g012480 | 11:17,071,210-17,074,676 | - | C1H11g31363 | C2H11g28325 | LOC_Os11g32360 | Os11g0526800 | - | Detail |
| CX11g012678 | 11:17,085,478-17,086,158 | + | - | C2H11g30464 | LOC_Os11g32380 | Os11g0527000 | - | Detail |
| CX11g013488 | 11:17,086,998-17,088,043 | - | - | C2H11g24046 | LOC_Os11g32390 | Os11g0527100 | - | Detail |
| CX11g014355 | 11:17,088,446-17,088,736 | + | - | - | - | Os11g0527150 | - | Detail |
| CX11g012924 | 11:17,098,140-17,099,964 | - | C1H11g27567 | C2H11g22361 | LOC_Os11g32410 | Os11g0527300 | - | Detail |
| CX11g011966 | 11:17,103,408-17,103,638 | + | - | - | - | - | - | Detail |
| CX11g012165 | 11:17,114,649-17,117,914 | + | C1H11g04891 | C2H11g00841 | LOC_Os11g41100 | Os11g0549300 | - | Detail |
| CX11g012725 | 11:17,129,636-17,130,010 | - | C1H6g22983 | C2H6g07703 | - | - | - | Detail |
| CX11g012482 | 11:17,132,185-17,138,213 | + | C1H11g31827 | C2H11g06601 | LOC_Os11g32470 | Os11g0528200 | - | Detail |
| CX11g012706 | 11:17,141,329-17,143,253 | + | C1H11g14657 | C2H11g22543 | LOC_Os11g32480 | Os11g0528300 | - | Detail |
| CX11g014779 | 11:17,143,996-17,148,330 | - | C1H11g30830 | C2H11g05344 | LOC_Os11g32490 | Os11g0528400 | - | Detail |
| CX11g013499 | 11:17,149,396-17,150,590 | - | C1H11g08990 | C2H11g05722 | LOC_Os11g32500 | Os11g0528500 | - | Detail |
| CX11g012246 | 11:17,152,442-17,158,427 | - | C1H11g21873 | C2H11g08000 | LOC_Os11g32520 | Os11g0528700 | TLD2 | Detail |
| CX11g012882 | 11:17,175,944-17,176,354 | + | - | - | - | - | - | Detail |
| CX11g014346 | 11:17,178,067-17,183,198 | - | C1H11g24198 | C2H11g28508 | LOC_Os11g32540 | Os11g0529125 | - | Detail |
| CX11g014378 | 11:17,188,873-17,190,841 | - | C1H11g24724 | C2H11g29369 | LOC_Os11g32580 | Os11g0529500 | - | Detail |
| CX11g011489 | 11:17,195,962-17,197,771 | + | C1H11g14507 | C2H11g08938 | LOC_Os11g32610 | Os11g0529800 | - | Detail |
| CX11g013006 | 11:17,200,884-17,202,616 | - | C1H11g01560 | C2H11g10543 | LOC_Os11g32620 | Os11g0529100 | - | Detail |
| CX11g013474 | 11:17,232,950-17,235,798 | - | C1H11g07861 | C2H11g26413 | LOC_Os11g32650 | Os11g0530600 | OsCHS1, OsCHS24 | Detail |
| CX11g012153 | 11:17,237,762-17,238,367 | + | - | - | - | - | - | Detail |