| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g23265 | 3:1,235,832-1,236,371 | + | C1H3g10403 | CX3g027007 | LOC_Os03g03440 | Os03g0125900 | - | Detail |
| C2H3g03318 | 3:1,237,434-1,242,083 | - | C1H3g12126 | CX3g030160 | LOC_Os03g03450 | Os03g0126000 | - | Detail |
| C2H3g01117 | 3:1,245,855-1,250,733 | - | C1H3g18852 | CX3g027762 | LOC_Os03g03460 | Os03g0126100 | - | Detail |
| C2H3g09637 | 3:1,252,295-1,259,222 | - | C1H3g19764 | CX3g026825 | LOC_Os03g03470 | Os03g0126300 | - | Detail |
| C2H3g01245 | 3:1,260,350-1,261,060 | - | C1H3g31582 | CX3g030498 | LOC_Os03g03480 | Os03g0126450 | - | Detail |
| C2H3g24889 | 3:1,263,662-1,264,351 | + | C1H3g28463 | CX3g031250 | LOC_Os03g03490 | Os03g0126600 | - | Detail |
| C2H3g03559 | 3:1,266,510-1,267,383 | + | C1H3g02888 | CX3g030815 | LOC_Os03g03500 | Os03g0126700 | - | Detail |
| C2H3g24408 | 3:1,270,166-1,273,929 | - | C1H3g13225 | CX3g025902 | LOC_Os03g03510 | Os03g0126800 | CIPK9 | Detail |
| C2H3g27173 | 3:1,277,534-1,277,890 | - | C1H3g17944 | CX3g025296 | LOC_Os03g03520 | Os03g0126900 | - | Detail |
| C2H3g18981 | 3:1,280,309-1,281,951 | - | C1H3g26030 | CX3g025913 | LOC_Os03g03530 | Os03g0127000 | - | Detail |
| C2H3g03780 | 3:1,282,147-1,282,497 | + | C1H3g10455 | - | - | - | - | Detail |
| C2H3g10836 | 3:1,288,174-1,290,490 | - | C1H3g07061 | CX3g025702 | LOC_Os03g03540 | Os03g0624600 | - | Detail |
| C2H3g05840 | 3:1,311,541-1,313,944 | + | C1H3g08724 | CX3g026687 | LOC_Os03g03550 | Os03g0127500 | - | Detail |
| C2H3g22731 | 3:1,314,269-1,319,253 | - | C1H3g30951 | CX3g027794 | LOC_Os03g03560 | Os03g0127600 | - | Detail |
| C2H3g10932 | 3:1,322,038-1,325,387 | + | C1H3g04194 | CX3g029550 | LOC_Os03g03570 | Os03g0127700 | - | Detail |
| C2H3g19343 | 3:1,328,504-1,336,058 | - | C1H3g21101 | CX3g028222 | LOC_Os03g03590 | Os03g0127900 | - | Detail |
| C2H3g04515 | 3:1,339,764-1,340,969 | + | C1H3g15997 | CX3g029732 | LOC_Os03g03600 | Os03g0128000 | - | Detail |
| C2H3g21656 | 3:1,342,440-1,363,000 | - | C1H3g11304 | CX3g027243 | LOC_Os03g03610 | Os03g0128100 | - | Detail |
| C2H3g11243 | 3:1,368,193-1,368,760 | - | C1H3g22245 | CX3g025297 | LOC_Os03g03630 | Os03g0128300 | - | Detail |
| C2H3g19615 | 3:1,370,201-1,371,413 | - | C1H3g27628 | CX3g029085 | LOC_Os03g03640 | Os03g0128400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g012283 | 11:16,830,174-16,833,422 | + | C1H11g11772 | C2H11g16263 | LOC_Os11g31980 | Os11g0522900 | - | Detail |
| CX11g014627 | 11:16,853,645-16,854,478 | + | C1H11g11218 | C2H11g12649 | LOC_Os11g32030 | Os11g0523110 | - | Detail |
| CX11g011740 | 11:16,862,736-16,865,716 | - | - | - | LOC_Os11g32050 | - | - | Detail |
| CX11g014228 | 11:16,872,795-16,873,040 | + | C1H11g20098 | C2H11g11493 | LOC_Os11g32070 | Os11g0479000 | - | Detail |
| CX11g014539 | 11:16,873,610-16,874,002 | - | C1H11g02810 | C2H11g11493 | LOC_Os11g32080 | Os11g0502700 | - | Detail |
| CX11g013393 | 11:16,882,312-16,882,470 | + | - | - | - | - | - | Detail |
| CX11g013633 | 11:16,890,216-16,893,330 | + | C1H11g00427 | C2H11g09717 | LOC_Os11g32100 | Os11g0523700 | OsbHLH002, OsICE1, OsbHLH002/OsICE1 | Detail |
| CX11g014158 | 11:16,904,299-16,909,751 | - | C1H11g17844 | C2H11g09614 | LOC_Os11g32110 | Os11g0523800 | OsARF1 | Detail |
| CX11g013407 | 11:16,936,614-16,942,724 | + | C1H11g13491 | C2H11g10817 | LOC_Os11g32160 | Os11g0524300 | - | Detail |
| CX11g014646 | 11:16,944,506-16,952,422 | - | C1H11g14327 | C2H11g21371 | LOC_Os11g32170 | Os11g0524601 | - | Detail |
| CX11g014370 | 11:16,961,550-16,961,717 | + | - | - | - | - | - | Detail |
| CX11g014944 | 11:16,975,635-16,982,186 | - | C1H11g23665 | C2H11g10444 | LOC_Os11g32210 | Os11g0524900 | - | Detail |
| CX11g013119 | 11:16,999,816-17,003,313 | + | C1H11g09838 | C2H11g23883 | LOC_Os11g32240 | Os11g0525200 | - | Detail |
| CX11g011262 | 11:17,010,433-17,019,006 | + | C1H11g05682 | C2H11g08336 | LOC_Os11g32260 | Os11g0525600 | - | Detail |
| CX11g013339 | 11:17,020,655-17,026,985 | + | C1H11g00418 | C2H11g25572 | LOC_Os11g32270 | Os11g0525700 | - | Detail |
| CX11g012404 | 11:17,028,155-17,030,574 | - | C1H11g06603 | C2H11g10749 | LOC_Os11g32280 | Os11g0525800 | - | Detail |
| CX11g014447 | 11:17,045,484-17,049,577 | - | C1H11g20221 | C2H11g13674 | LOC_Os11g32290 | Os11g0525900 | - | Detail |
| CX11g012845 | 11:17,050,150-17,050,338 | + | - | - | - | - | - | Detail |
| CX11g013878 | 11:17,054,907-17,057,073 | + | C1H11g11158 | C2H11g01012 | LOC_Os11g32320 | Os11g0526200 | - | Detail |
| CX11g011924 | 11:17,060,877-17,061,044 | - | - | - | - | - | - | Detail |