| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g16988 | 5:21,414,746-21,421,678 | - | C2H5g26863 | CX5g040432 | LOC_Os05g45170 | Os05g0527700 | - | Detail |
| C1H5g19598 | 5:21,423,593-21,425,029 | - | C2H5g14340 | CX5g040432 | LOC_Os05g45180 | Os05g0527800 | - | Detail |
| C1H5g03542 | 5:21,431,243-21,432,369 | - | C2H5g08285 | CX5g040432 | LOC_Os05g45200 | Os05g0527900 | - | Detail |
| C1H5g26785 | 5:21,439,178-21,439,492 | - | C2H5g08285 | CX5g040432 | LOC_Os05g45200 | Os05g0527900 | - | Detail |
| C1H5g24507 | 5:21,439,979-21,448,285 | - | C2H5g01814 | CX5g038665 | LOC_Os05g45210 | Os05g0528000 | OsRBOH5 | Detail |
| C1H5g28587 | 5:21,452,114-21,452,753 | - | C2H5g28345 | CX5g037204 | LOC_Os05g45220 | Os05g0528200 | - | Detail |
| C1H5g01096 | 5:21,455,891-21,456,097 | - | C2H5g25633 | CX5g037082 | LOC_Os05g49210 | Os05g0583000 | - | Detail |
| C1H5g01594 | 5:21,461,003-21,461,713 | - | C2H5g03986 | CX5g039623 | LOC_Os05g45230 | Os05g0528500 | - | Detail |
| C1H5g08207 | 5:21,465,095-21,467,713 | - | C2H5g20737 | CX5g040089 | LOC_Os05g45240 | Os05g0528600 | YUCCA2, OsYUCCA2, OsYUC2 | Detail |
| C1H5g01627 | 5:21,476,364-21,478,834 | + | C2H5g24380 | CX5g037129 | LOC_Os05g45270 | Os05g0528900 | - | Detail |
| C1H5g10151 | 5:21,479,641-21,482,706 | - | C2H5g24809 | CX5g037006 | LOC_Os05g45280 | Os05g0529000 | OsCOLE1 | Detail |
| C1H5g28513 | 5:21,485,916-21,486,644 | - | C2H5g17684 | CX5g037310 | LOC_Os05g45300 | Os05g0529200 | - | Detail |
| C1H5g24048 | 5:21,487,822-21,490,285 | - | C2H5g19780 | CX5g038523 | LOC_Os05g45310 | Os05g0529300 | - | Detail |
| C1H5g11025 | 5:21,490,969-21,492,898 | + | C2H5g25402 | CX5g039119 | LOC_Os05g45320 | Os05g0529400 | - | Detail |
| C1H5g31384 | 5:21,497,730-21,502,849 | + | C2H5g16121 | CX5g036791 | LOC_Os05g45340 | Os05g0529600 | - | Detail |
| C1H5g03075 | 5:21,509,364-21,512,164 | - | C2H5g16704 | CX5g038291 | LOC_Os05g45350 | Os05g0529700 | - | Detail |
| C1H5g03402 | 5:21,515,411-21,518,631 | - | C2H5g05411 | CX5g039702 | LOC_Os05g45370 | Os05g0529900 | - | Detail |
| C1H5g16768 | 5:21,523,712-21,527,251 | - | C2H5g30642 | CX5g038212 | LOC_Os05g45400 | Os05g0530300 | - | Detail |
| C1H5g10593 | 5:21,530,752-21,535,379 | + | C2H5g07629 | CX5g039260 | LOC_Os05g45410 | Os05g0530400 | OsSPL7, SPL7, HSFA-4d | Detail |
| C1H5g11637 | 5:21,535,908-21,540,342 | - | C2H5g03685 | CX5g040944 | LOC_Os05g45420 | Os05g0530500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g013428 | 11:16,119,425-16,119,754 | - | - | - | - | - | - | Detail |
| CX11g013828 | 11:16,122,315-16,123,110 | + | C1H11g06583 | C2H11g14091 | - | - | - | Detail |
| CX11g011337 | 11:16,123,449-16,124,822 | - | - | - | LOC_Os11g31060 | Os11g0506800 | OsBAG6 | Detail |
| CX11g012904 | 11:16,128,628-16,129,765 | - | C1H11g18981 | C2H11g12950 | - | - | - | Detail |
| CX11g013034 | 11:16,131,932-16,132,216 | - | C1H11g04733 | C2H11g07707 | LOC_Os11g31070 | Os11g0506300 | - | Detail |
| CX11g011882 | 11:16,158,647-16,158,944 | - | C1H11g01433 | C2H11g24452 | - | - | - | Detail |
| CX11g014596 | 11:16,175,097-16,177,507 | + | C1H11g28049 | C2H11g19133 | LOC_Os11g31090 | Os11g0507200 | - | Detail |
| CX11g011414 | 11:16,179,534-16,185,656 | - | C1H11g02002 | C2H11g00051 | LOC_Os11g31100 | Os11g0507300 | - | Detail |
| CX11g014983 | 11:16,189,514-16,195,125 | - | C1H11g16532 | C2H11g25408 | LOC_Os11g31110 | Os11g0507400 | - | Detail |
| CX11g013939 | 11:16,197,354-16,197,713 | - | - | - | LOC_Os11g31120 | - | - | Detail |
| CX11g011275 | 11:16,231,130-16,231,810 | + | - | - | - | - | - | Detail |
| CX11g012879 | 11:16,248,158-16,256,969 | + | C1H11g15164 | C2H11g13604 | - | - | - | Detail |
| CX11g014845 | 11:16,285,939-16,288,361 | - | C1H11g17370 | C2H11g14886 | LOC_Os11g31190 | Os11g0508600 | 11N3, OsSWEET14, Os11N3, Os-11N3, Xa41(t) | Detail |
| CX11g013190 | 11:16,311,094-16,311,615 | - | - | - | LOC_Os08g26210 | - | - | Detail |
| CX11g011889 | 11:16,371,777-16,372,112 | + | C1H11g16256 | C2H11g02622 | LOC_Os11g31400 | Os11g0512800 | - | Detail |
| CX11g014077 | 11:16,398,201-16,398,794 | - | - | - | LOC_Os11g38820 | - | - | Detail |
| CX11g011988 | 11:16,426,885-16,427,265 | + | - | - | - | - | - | Detail |
| CX11g014303 | 11:16,429,078-16,429,254 | + | - | - | - | - | - | Detail |
| CX11g011127 | 11:16,483,159-16,485,608 | - | C1H11g00181 | C2H11g24919 | LOC_Os11g31570 | Os11g0514800 | - | Detail |
| CX11g013602 | 11:16,496,516-16,496,692 | - | - | - | - | Os02g0188201 | - | Detail |