| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g20698 | 1:26,375,430-26,379,283 | + | C2H1g20058 | CX1g004912 | LOC_Os01g51390 | Os01g0711100 | - | Detail |
| C1H1g14378 | 1:26,382,583-26,384,638 | + | C2H1g29914 | CX1g006000 | LOC_Os01g51400 | Os01g0711200 | - | Detail |
| C1H1g06125 | 1:26,391,194-26,397,667 | + | C2H1g17094 | CX1g004328 | LOC_Os01g51410 | Os01g0711400 | - | Detail |
| C1H1g22520 | 1:26,398,744-26,402,219 | + | C2H1g13046 | CX1g005290 | LOC_Os01g51420 | Os01g0711500 | OsCBL10 | Detail |
| C1H1g02976 | 1:26,402,795-26,405,579 | + | C2H1g24377 | - | - | - | - | Detail |
| C1H1g07891 | 1:26,410,755-26,413,232 | - | C2H1g30017 | CX1g001138 | LOC_Os01g51450 | Os01g0711800 | - | Detail |
| C1H1g26536 | 1:26,416,653-26,418,394 | - | C2H1g29049 | CX1g003877 | LOC_Os01g51470 | Os01g0712500 | - | Detail |
| C1H1g14497 | 1:26,429,530-26,433,561 | - | C2H1g17668 | CX1g005977 | LOC_Os01g51520 | Os01g0712500 | - | Detail |
| C1H1g30738 | 1:26,434,418-26,438,145 | - | C2H1g18972 | - | - | - | - | Detail |
| C1H1g28237 | 1:26,445,898-26,446,545 | - | C2H1g29576 | CX1g003877 | LOC_Os01g51490 | Os01g0711900 | - | Detail |
| C1H1g23448 | 1:26,453,260-26,455,774 | + | C2H1g29576 | CX1g004056 | LOC_Os01g51510 | Os01g0711900 | - | Detail |
| C1H1g09610 | 1:26,462,673-26,465,002 | - | C2H1g21215 | CX1g005977 | LOC_Os01g51530 | Os01g0712600 | - | Detail |
| C1H1g29773 | 1:26,484,284-26,485,560 | + | C2H1g16428 | CX1g004438 | LOC_Os01g51550 | Os01g0712800 | - | Detail |
| C1H1g05015 | 1:26,491,447-26,492,832 | + | C2H1g17193 | CX1g004707 | LOC_Os01g51570 | Os01g0713200 | - | Detail |
| C1H1g16737 | 1:26,495,968-26,500,936 | + | C2H1g10923 | CX1g006175 | LOC_Os01g51610 | Os01g0713600 | OsLFL1 | Detail |
| C1H1g22175 | 1:26,504,171-26,507,341 | + | C2H1g14637 | CX1g006183 | LOC_Os01g51620 | Os01g0713800 | - | Detail |
| C1H1g05405 | 1:26,510,815-26,532,359 | - | C2H1g19385 | CX1g003130 | LOC_Os01g51630 | Os01g0713900 | - | Detail |
| C1H1g08011 | 1:26,536,931-26,541,173 | - | C2H1g30054 | CX1g004684 | LOC_Os01g51640 | Os01g0714100 | - | Detail |
| C1H1g17120 | 1:26,553,664-26,555,085 | - | C2H1g26622 | CX1g003615 | LOC_Os01g51690 | Os01g0714800 | OsWRKY26 | Detail |
| C1H1g10774 | 1:26,563,309-26,566,896 | - | C2H1g20321 | CX1g003805 | LOC_Os01g51700 | Os01g0714900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g013428 | 11:16,119,425-16,119,754 | - | - | - | - | - | - | Detail |
| CX11g013828 | 11:16,122,315-16,123,110 | + | C1H11g06583 | C2H11g14091 | - | - | - | Detail |
| CX11g011337 | 11:16,123,449-16,124,822 | - | - | - | LOC_Os11g31060 | Os11g0506800 | OsBAG6 | Detail |
| CX11g012904 | 11:16,128,628-16,129,765 | - | C1H11g18981 | C2H11g12950 | - | - | - | Detail |
| CX11g013034 | 11:16,131,932-16,132,216 | - | C1H11g04733 | C2H11g07707 | LOC_Os11g31070 | Os11g0506300 | - | Detail |
| CX11g011882 | 11:16,158,647-16,158,944 | - | C1H11g01433 | C2H11g24452 | - | - | - | Detail |
| CX11g014596 | 11:16,175,097-16,177,507 | + | C1H11g28049 | C2H11g19133 | LOC_Os11g31090 | Os11g0507200 | - | Detail |
| CX11g011414 | 11:16,179,534-16,185,656 | - | C1H11g02002 | C2H11g00051 | LOC_Os11g31100 | Os11g0507300 | - | Detail |
| CX11g014983 | 11:16,189,514-16,195,125 | - | C1H11g16532 | C2H11g25408 | LOC_Os11g31110 | Os11g0507400 | - | Detail |
| CX11g013939 | 11:16,197,354-16,197,713 | - | - | - | LOC_Os11g31120 | - | - | Detail |
| CX11g011275 | 11:16,231,130-16,231,810 | + | - | - | - | - | - | Detail |
| CX11g012879 | 11:16,248,158-16,256,969 | + | C1H11g15164 | C2H11g13604 | - | - | - | Detail |
| CX11g014845 | 11:16,285,939-16,288,361 | - | C1H11g17370 | C2H11g14886 | LOC_Os11g31190 | Os11g0508600 | 11N3, OsSWEET14, Os11N3, Os-11N3, Xa41(t) | Detail |
| CX11g013190 | 11:16,311,094-16,311,615 | - | - | - | LOC_Os08g26210 | - | - | Detail |
| CX11g011889 | 11:16,371,777-16,372,112 | + | C1H11g16256 | C2H11g02622 | LOC_Os11g31400 | Os11g0512800 | - | Detail |
| CX11g014077 | 11:16,398,201-16,398,794 | - | - | - | LOC_Os11g38820 | - | - | Detail |
| CX11g011988 | 11:16,426,885-16,427,265 | + | - | - | - | - | - | Detail |
| CX11g014303 | 11:16,429,078-16,429,254 | + | - | - | - | - | - | Detail |
| CX11g011127 | 11:16,483,159-16,485,608 | - | C1H11g00181 | C2H11g24919 | LOC_Os11g31570 | Os11g0514800 | - | Detail |
| CX11g013602 | 11:16,496,516-16,496,692 | - | - | - | - | Os02g0188201 | - | Detail |