| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g16330 | 3:33,552,540-33,557,647 | + | C2H3g08868 | CX3g030691 | LOC_Os03g64250 | Os03g0860000 | - | Detail |
| C1H3g08606 | 3:33,565,584-33,581,864 | - | C2H3g04480 | CX3g027910 | LOC_Os03g64290 | Os03g0860700 | - | Detail |
| C1H3g27781 | 3:33,586,510-33,592,811 | + | C2H3g22239 | CX3g029996 | LOC_Os03g64300 | Os03g0860900 | - | Detail |
| C1H3g04412 | 3:33,593,879-33,604,834 | + | C2H3g11459 | CX3g027284 | LOC_Os03g64320 | Os03g0861100 | - | Detail |
| C1H3g04119 | 3:33,612,242-33,613,617 | - | C2H3g16452 | CX3g031284 | LOC_Os03g64340 | Os03g0861400 | - | Detail |
| C1H3g17429 | 3:33,619,949-33,625,103 | - | C2H3g12472 | CX3g030656 | LOC_Os03g64350 | Os03g0861700 | - | Detail |
| C1H3g24824 | 3:33,625,267-33,628,020 | + | C2H3g08959 | CX3g028909 | LOC_Os03g64360 | Os03g0861800 | - | Detail |
| C1H3g08341 | 3:33,638,279-33,645,157 | + | C2H3g16629 | CX3g029193 | LOC_Os03g64400 | Os03g0862100 | - | Detail |
| C1H4g00861 | 4:16,416-19,947 | + | C2H4g13233 | CX4g032894 | LOC_Os04g01070 | Os04g0100300 | - | Detail |
| C1H4g16035 | 4:16,510-18,252 | - | C2H4g12191 | - | - | - | - | Detail |
| C1H4g09455 | 4:39,781-40,005 | - | C2H12g12031 | CX4g034444 | LOC_Os02g17030 | - | - | Detail |
| C1H4g03520 | 4:42,032-50,044 | + | C2H4g17137 | CX4g036339 | LOC_Os08g33280 | - | - | Detail |
| C1H4g00970 | 4:97,742-106,695 | + | C2H4g05647 | CX4g034809 | LOC_Os04g01130 | Os04g0101300 | - | Detail |
| C1H4g04170 | 4:108,701-110,550 | - | C2H4g16448 | CX4g034027 | LOC_Os04g01140 | Os04g0101400 | CYP93G1, OsCYP93G1, OsFNSII, FNSII | Detail |
| C1H4g21331 | 4:124,561-127,342 | + | C2H4g17331 | CX4g033419 | LOC_Os04g01150 | Os04g0101700 | - | Detail |
| C1H4g00085 | 4:129,761-132,613 | - | C2H4g10066 | CX4g031572 | LOC_Os04g01160 | Os04g0101800 | SOR1 | Detail |
| C1H4g29729 | 4:176,858-177,094 | + | C2H4g10312 | - | - | - | - | Detail |
| C1H4g11244 | 4:177,315-182,878 | + | C2H4g18592 | CX4g036467 | LOC_Os04g01230 | Os04g0102500 | - | Detail |
| C1H4g30914 | 4:183,184-187,055 | - | C2H4g15768 | CX4g033514 | LOC_Os04g01240 | Os04g0102600 | - | Detail |
| C1H4g22444 | 4:188,075-197,428 | - | C2H4g26141 | CX4g035629 | LOC_Os04g01250 | Os04g0102700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g011306 | 11:15,294,256-15,297,945 | - | - | - | LOC_Os11g35140 | - | - | Detail |
| CX11g011816 | 11:15,313,818-15,315,765 | + | C1H11g14398 | C2H11g14682 | LOC_Os11g29700 | Os11g0488600 | - | Detail |
| CX11g013123 | 11:15,316,791-15,319,765 | - | C1H11g21483 | C2H11g18060 | LOC_Os11g29690 | Os11g0488500 | - | Detail |
| CX11g011474 | 11:15,320,206-15,322,640 | - | C1H11g04130 | C2H11g26976 | LOC_Os11g29680 | Os11g0488400 | - | Detail |
| CX11g011942 | 11:15,326,916-15,327,253 | + | C1H11g02127 | C2H11g11772 | LOC_Os09g26250 | - | - | Detail |
| CX11g014982 | 11:15,333,651-15,335,273 | + | C1H11g08115 | C2H11g17249 | LOC_Os11g29630 | Os11g0487100 | - | Detail |
| CX11g012672 | 11:15,346,894-15,351,890 | + | C1H11g21289 | C2H11g09967 | LOC_Os11g29520 | Os11g0485900 | - | Detail |
| CX11g014154 | 11:15,353,653-15,353,874 | + | - | - | - | - | - | Detail |
| CX11g011293 | 11:15,359,961-15,360,415 | - | - | - | LOC_Os11g30180 | - | - | Detail |
| CX11g014664 | 11:15,363,829-15,368,714 | - | C1H11g26253 | C2H11g02984 | LOC_Os11g29490 | Os11g0485200 | - | Detail |
| CX11g013967 | 11:15,384,583-15,384,957 | + | C1H11g03351 | C2H11g28581 | LOC_Os11g29420 | Os11g0484700 | - | Detail |
| CX11g013424 | 11:15,397,298-15,397,489 | + | - | - | - | - | - | Detail |
| CX11g013586 | 11:15,409,564-15,414,239 | + | C1H11g31766 | C2H11g07342 | LOC_Os11g29750 | Os11g0485200 | - | Detail |
| CX11g012659 | 11:15,452,533-15,455,721 | + | C1H11g15909 | C2H11g12701 | LOC_Os11g29790 | Os11g0490200 | - | Detail |
| CX11g014880 | 11:15,460,536-15,461,180 | + | - | - | LOC_Os11g29810 | Os11g0490300 | - | Detail |
| CX11g013587 | 11:15,462,849-15,463,043 | - | - | - | - | - | - | Detail |
| CX11g012238 | 11:15,474,078-15,481,964 | + | C1H11g25328 | C2H11g04465 | LOC_Os11g29840 | Os11g0490600 | - | Detail |
| CX11g013968 | 11:15,489,510-15,491,990 | + | C1H11g17465 | C2H11g24558 | LOC_Os11g29850 | Os11g0490800 | ABCI7, OsABCI7_2, OsABCI8, OsABCI8.2 | Detail |
| CX11g010965 | 11:15,504,144-15,504,939 | + | - | - | - | - | - | Detail |
| CX11g011061 | 11:15,508,322-15,508,495 | + | - | - | - | Os02g0188201 | - | Detail |