| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g20286 | 5:16,289,502-16,290,355 | - | C1H5g11914 | CX5g037239 | LOC_Os05g33040 | Os05g0398000 | OsCYCP1;1 | Detail |
| C2H5g27231 | 5:16,294,339-16,303,276 | - | C1H5g28942 | CX5g037249 | LOC_Os05g33050 | Os05g0398100 | - | Detail |
| C2H5g19259 | 5:16,310,111-16,311,431 | + | C1H5g16303 | CX5g040051 | LOC_Os05g42210 | Os05g0501400 | SDRLK-4 | Detail |
| C2H5g04735 | 5:16,313,938-16,314,478 | - | C1H5g00260 | - | - | - | - | Detail |
| C2H5g14955 | 5:16,322,407-16,327,547 | + | C1H5g19211 | CX5g037475 | LOC_Os05g33080 | Os05g0398800 | - | Detail |
| C2H5g26344 | 5:16,333,663-16,335,246 | + | C1H5g10129 | CX5g036980 | LOC_Os05g33100 | Os05g0399100 | - | Detail |
| C2H5g17345 | 5:16,335,723-16,337,958 | + | C1H5g31879 | CX5g036980 | LOC_Os05g33100 | Os05g0399100 | - | Detail |
| C2H5g23530 | 5:16,348,975-16,353,923 | + | C1H5g31879 | CX5g036980 | LOC_Os05g33100 | Os05g0399100 | - | Detail |
| C2H5g00064 | 5:16,355,997-16,357,462 | + | C1H5g23483 | CX5g036980 | LOC_Os05g33100 | Os05g0399200 | - | Detail |
| C2H5g28651 | 5:16,362,426-16,367,609 | + | C1H5g23914 | CX5g041133 | LOC_Os05g33130 | Os05g0399300 | OsChia1b, Cht-2 | Detail |
| C2H5g02825 | 5:16,367,685-16,368,134 | + | C1H5g23914 | CX5g041133 | LOC_Os05g33130 | Os05g0399300 | OsChia1b, Cht-2 | Detail |
| C2H5g28257 | 5:16,378,758-16,380,124 | + | C1H5g21497 | CX5g041133 | LOC_Os05g33140 | Os05g0399400 | - | Detail |
| C2H5g05340 | 5:16,392,390-16,393,673 | + | C1H5g31105 | CX5g037858 | LOC_Os05g33150 | Os05g0399700 | OsChia1d, Cht7 | Detail |
| C2H5g20742 | 5:16,401,877-16,404,126 | + | C1H5g16219 | CX5g039652 | LOC_Os05g33190 | Os05g0400100 | - | Detail |
| C2H5g29371 | 5:16,406,887-16,409,281 | + | C1H5g18465 | CX5g040002 | LOC_Os05g33200 | Os05g0400200 | - | Detail |
| C2H5g02134 | 5:16,411,461-16,414,532 | - | C1H5g31706 | CX5g037797 | LOC_Os05g33210 | Os05g0400400 | - | Detail |
| C2H5g02851 | 5:16,417,866-16,418,977 | + | C1H5g07605 | CX5g039000 | LOC_Os05g33220 | Os05g0400500 | - | Detail |
| C2H5g13389 | 5:16,419,654-16,425,478 | + | C1H5g25534 | CX5g039584 | LOC_Os05g33230 | Os05g0400600 | ARG1 | Detail |
| C2H5g11031 | 5:16,425,630-16,427,459 | - | C1H5g14185 | CX5g037889 | LOC_Os05g33240 | Os05g0400700 | - | Detail |
| C2H5g08270 | 5:16,427,884-16,433,661 | + | C1H5g05082 | CX5g039344 | LOC_Os05g33260 | Os05g0400800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004458 | 1:6,225,403-6,226,593 | + | C1H1g31834 | C2H1g09030 | LOC_Os01g12690 | Os01g0226700 | - | Detail |
| CX1g003172 | 1:6,233,383-6,235,295 | + | - | - | LOC_Os01g12700 | - | - | Detail |
| CX1g003495 | 1:6,241,767-6,250,246 | + | C1H1g16770 | C2H1g01170 | LOC_Os01g12710 | Os01g0227100 | - | Detail |
| CX1g000717 | 1:6,261,079-6,265,361 | + | C1H1g17285 | C2H1g13949 | LOC_Os01g12720 | Os01g0227200 | OsPERK1 | Detail |
| CX1g001842 | 1:6,266,652-6,269,760 | + | C1H1g25457 | C2H1g18702 | LOC_Os01g12730 | Os01g0227300 | - | Detail |
| CX1g005082 | 1:6,270,921-6,272,915 | + | C1H1g25274 | C2H1g07843 | LOC_Os01g12740 | Os01g0227400 | - | Detail |
| CX1g001031 | 1:6,275,691-6,278,696 | + | C1H1g23728 | C2H1g27903 | LOC_Os01g12750 | Os01g0227500 | - | Detail |
| CX1g005755 | 1:6,303,522-6,307,193 | + | C1H1g29762 | C2H1g18144 | LOC_Os01g12790 | Os01g0228200 | - | Detail |
| CX1g000008 | 1:6,307,731-6,310,624 | - | C1H1g00126 | C2H1g23747 | LOC_Os01g12800 | Os01g0228300 | - | Detail |
| CX1g001945 | 1:6,314,433-6,316,565 | + | C1H1g09783 | C2H1g03627 | LOC_Os01g12810 | Os01g0228400 | - | Detail |
| CX1g000835 | 1:6,317,214-6,318,719 | - | C1H1g01893 | C2H1g17734 | LOC_Os01g12820 | Os01g0228500 | - | Detail |
| CX1g004836 | 1:6,320,989-6,324,517 | - | C1H1g19893 | C2H1g24769 | LOC_Os01g12830 | Os01g0228600 | - | Detail |
| CX1g001640 | 1:6,327,813-6,330,643 | - | C1H1g14653 | C2H1g00699 | LOC_Os01g12840 | Os01g0228800 | - | Detail |
| CX1g006490 | 1:6,341,548-6,347,986 | + | C1H1g26396 | C2H1g15617 | LOC_Os01g12860 | Os01g0229000 | - | Detail |
| CX1g006720 | 1:6,350,120-6,353,250 | - | C1H1g13199 | C2H1g03922 | LOC_Os01g12870 | Os01g0229100 | - | Detail |
| CX1g003875 | 1:6,353,804-6,361,504 | + | C1H1g15790 | C2H1g14330 | LOC_Os01g12880 | Os01g0229200 | - | Detail |
| CX1g001622 | 1:6,385,112-6,389,787 | + | C1H1g29443 | C2H1g05009 | LOC_Os01g12890 | Os01g0229300 | CCP1, OsEMF1, DFO1, EMF1 | Detail |
| CX1g003284 | 1:6,391,193-6,393,541 | - | C1H1g08244 | C2H1g10198 | LOC_Os01g12900 | Os01g0229400 | RAC1, OsRAC1, OsRac1, Os Rac1 | Detail |
| CX1g003413 | 1:6,399,941-6,401,913 | + | C1H1g30145 | C2H1g13210 | LOC_Os01g12910 | Os01g0229500 | - | Detail |
| CX1g004766 | 1:6,402,707-6,403,441 | + | C1H1g25208 | C2H1g03678 | LOC_Os01g12920 | Os01g0229600 | - | Detail |