| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g12320 | 4:28,160,357-28,164,064 | - | C1H4g08062 | CX4g034636 | LOC_Os04g54870 | Os04g0641400 | - | Detail |
| C2H4g02939 | 4:28,171,262-28,171,681 | - | C1H4g25048 | - | LOC_Os04g54900 | Os04g0641700 | OsILI1 | Detail |
| C2H4g16501 | 4:28,188,581-28,195,094 | - | C1H4g05112 | CX4g035146 | LOC_Os04g54930 | Os04g0642000 | - | Detail |
| C2H4g20907 | 4:28,200,890-28,203,882 | + | C1H4g03037 | CX4g034568 | LOC_Os04g54940 | Os04g0642100 | - | Detail |
| C2H4g19294 | 4:28,207,440-28,209,816 | - | C1H4g13287 | CX4g034114 | LOC_Os04g54960 | Os04g0642300 | - | Detail |
| C2H4g04804 | 4:28,210,985-28,211,607 | - | C1H7g08411 | CX4g033158 | - | - | - | Detail |
| C2H4g06799 | 4:28,217,701-28,218,450 | + | C1H4g31812 | CX4g036426 | LOC_Os04g55000 | Os04g0643000 | - | Detail |
| C2H4g14202 | 4:28,225,668-28,230,501 | + | C1H4g05482 | CX4g036426 | LOC_Os04g55030 | Os04g0643000 | - | Detail |
| C2H4g12695 | 4:28,232,729-28,235,390 | + | C1H4g16082 | CX4g032227 | LOC_Os04g55040 | Os04g0643100 | - | Detail |
| C2H4g28284 | 4:28,236,387-28,240,181 | - | C1H4g07679 | CX4g032328 | LOC_Os04g55050 | Os04g0643200 | - | Detail |
| C2H4g13893 | 4:28,242,345-28,247,705 | + | C1H4g26887 | CX4g032467 | LOC_Os04g55060 | Os04g0643300 | - | Detail |
| C2H4g14055 | 4:28,248,699-28,250,908 | - | C1H4g14904 | CX4g034614 | LOC_Os04g55070 | Os04g0643500 | - | Detail |
| C2H4g07680 | 4:28,252,071-28,259,557 | + | C1H4g04970 | CX4g031952 | LOC_Os04g55080 | Os04g0643600 | OsCNGC6 | Detail |
| C2H4g17557 | 4:28,259,781-28,261,121 | + | C1H4g25880 | CX4g032969 | LOC_Os04g55090 | Os04g0643700 | - | Detail |
| C2H4g05237 | 4:28,266,472-28,268,829 | + | C1H4g19289 | CX4g036082 | LOC_Os04g55100 | Os04g0643800 | - | Detail |
| C2H4g28955 | 4:28,272,198-28,274,538 | + | C1H4g06814 | CX4g032719 | LOC_Os04g55110 | Os04g0644000 | - | Detail |
| C2H4g21587 | 4:28,275,619-28,276,185 | + | - | CX4g035512 | LOC_Os04g55120 | Os04g0644100 | - | Detail |
| C2H4g25807 | 4:28,278,621-28,281,260 | - | - | CX4g036399 | LOC_Os04g55130 | Os04g0644200 | - | Detail |
| C2H4g15496 | 4:28,286,109-28,290,179 | + | C1H4g18784 | CX4g035567 | LOC_Os04g55150 | Os04g0644300 | - | Detail |
| C2H4g07022 | 4:28,290,599-28,291,489 | - | C1H4g27799 | CX4g033466 | LOC_Os04g55159 | Os04g0644400 | OsAAI1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004458 | 1:6,225,403-6,226,593 | + | C1H1g31834 | C2H1g09030 | LOC_Os01g12690 | Os01g0226700 | - | Detail |
| CX1g003172 | 1:6,233,383-6,235,295 | + | - | - | LOC_Os01g12700 | - | - | Detail |
| CX1g003495 | 1:6,241,767-6,250,246 | + | C1H1g16770 | C2H1g01170 | LOC_Os01g12710 | Os01g0227100 | - | Detail |
| CX1g000717 | 1:6,261,079-6,265,361 | + | C1H1g17285 | C2H1g13949 | LOC_Os01g12720 | Os01g0227200 | OsPERK1 | Detail |
| CX1g001842 | 1:6,266,652-6,269,760 | + | C1H1g25457 | C2H1g18702 | LOC_Os01g12730 | Os01g0227300 | - | Detail |
| CX1g005082 | 1:6,270,921-6,272,915 | + | C1H1g25274 | C2H1g07843 | LOC_Os01g12740 | Os01g0227400 | - | Detail |
| CX1g001031 | 1:6,275,691-6,278,696 | + | C1H1g23728 | C2H1g27903 | LOC_Os01g12750 | Os01g0227500 | - | Detail |
| CX1g005755 | 1:6,303,522-6,307,193 | + | C1H1g29762 | C2H1g18144 | LOC_Os01g12790 | Os01g0228200 | - | Detail |
| CX1g000008 | 1:6,307,731-6,310,624 | - | C1H1g00126 | C2H1g23747 | LOC_Os01g12800 | Os01g0228300 | - | Detail |
| CX1g001945 | 1:6,314,433-6,316,565 | + | C1H1g09783 | C2H1g03627 | LOC_Os01g12810 | Os01g0228400 | - | Detail |
| CX1g000835 | 1:6,317,214-6,318,719 | - | C1H1g01893 | C2H1g17734 | LOC_Os01g12820 | Os01g0228500 | - | Detail |
| CX1g004836 | 1:6,320,989-6,324,517 | - | C1H1g19893 | C2H1g24769 | LOC_Os01g12830 | Os01g0228600 | - | Detail |
| CX1g001640 | 1:6,327,813-6,330,643 | - | C1H1g14653 | C2H1g00699 | LOC_Os01g12840 | Os01g0228800 | - | Detail |
| CX1g006490 | 1:6,341,548-6,347,986 | + | C1H1g26396 | C2H1g15617 | LOC_Os01g12860 | Os01g0229000 | - | Detail |
| CX1g006720 | 1:6,350,120-6,353,250 | - | C1H1g13199 | C2H1g03922 | LOC_Os01g12870 | Os01g0229100 | - | Detail |
| CX1g003875 | 1:6,353,804-6,361,504 | + | C1H1g15790 | C2H1g14330 | LOC_Os01g12880 | Os01g0229200 | - | Detail |
| CX1g001622 | 1:6,385,112-6,389,787 | + | C1H1g29443 | C2H1g05009 | LOC_Os01g12890 | Os01g0229300 | CCP1, OsEMF1, DFO1, EMF1 | Detail |
| CX1g003284 | 1:6,391,193-6,393,541 | - | C1H1g08244 | C2H1g10198 | LOC_Os01g12900 | Os01g0229400 | RAC1, OsRAC1, OsRac1, Os Rac1 | Detail |
| CX1g003413 | 1:6,399,941-6,401,913 | + | C1H1g30145 | C2H1g13210 | LOC_Os01g12910 | Os01g0229500 | - | Detail |
| CX1g004766 | 1:6,402,707-6,403,441 | + | C1H1g25208 | C2H1g03678 | LOC_Os01g12920 | Os01g0229600 | - | Detail |