| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g00038 | 3:19,981,640-19,983,595 | + | C1H3g08754 | CX3g026495 | LOC_Os03g38950 | Os03g0586500 | - | Detail |
| C2H3g11125 | 3:19,984,399-19,987,753 | - | C1H3g06874 | CX3g031261 | LOC_Os03g38960 | Os03g0586600 | - | Detail |
| C2H3g25834 | 3:19,991,913-20,004,555 | - | C1H3g18468 | CX3g028836 | LOC_Os03g38970 | Os03g0586700 | PALD | Detail |
| C2H3g21968 | 3:20,010,954-20,019,304 | - | C1H3g11741 | CX3g027203 | LOC_Os03g38980 | Os03g0586800 | - | Detail |
| C2H3g04567 | 3:20,019,454-20,025,968 | + | C1H3g27042 | CX3g026912 | LOC_Os03g38990 | Os03g0586900 | OsPLS2 | Detail |
| C2H3g23894 | 3:20,027,470-20,030,489 | + | C1H3g17183 | CX3g030907 | LOC_Os03g39000 | Os03g0587000 | - | Detail |
| C2H3g20201 | 3:20,031,238-20,032,671 | + | C1H3g08966 | CX3g026983 | LOC_Os03g39010 | Os03g0587100 | - | Detail |
| C2H3g30660 | 3:20,033,025-20,038,825 | - | C1H3g03134 | CX3g025439 | LOC_Os03g39020 | Os03g0587200 | - | Detail |
| C2H3g22828 | 3:20,047,828-20,050,143 | + | C1H3g06709 | CX3g026068 | LOC_Os03g39040 | Os03g0587600 | - | Detail |
| C2H3g01127 | 3:20,060,374-20,065,415 | + | C1H3g00174 | CX3g026068 | LOC_Os03g39129 | Os03g0588200 | - | Detail |
| C2H3g05989 | 3:20,074,692-20,077,448 | + | C1H3g31500 | CX3g026068 | LOC_Os03g39160 | Os03g0588600 | - | Detail |
| C2H3g21270 | 3:20,081,994-20,088,736 | + | C1H3g15293 | CX3g027455 | LOC_Os03g39170 | Os03g0588800 | - | Detail |
| C2H3g15399 | 3:20,109,752-20,110,504 | - | - | CX3g027460 | LOC_Os03g39220 | Os03g0589100 | - | Detail |
| C2H3g02679 | 3:20,112,480-20,115,256 | - | C1H3g01503 | CX3g027116 | LOC_Os03g39230 | Os03g0589300 | - | Detail |
| C2H3g24251 | 3:20,116,216-20,116,646 | - | C1H3g25070 | CX3g024950 | - | - | - | Detail |
| C2H3g07550 | 3:20,121,103-20,122,682 | - | - | CX3g027460 | LOC_Os03g39370 | Os03g0589400 | - | Detail |
| C2H3g04403 | 3:20,139,994-20,140,279 | + | C1H3g22951 | - | LOC_Os03g39380 | Os10g0571100 | - | Detail |
| C2H3g14133 | 3:20,172,232-20,173,928 | - | C1H3g05834 | CX3g031061 | LOC_Os03g39520 | Os03g0591600 | - | Detail |
| C2H3g11830 | 3:20,200,756-20,205,228 | - | C1H3g15078 | CX3g026609 | LOC_Os03g39540 | Os03g0248300 | - | Detail |
| C2H3g18871 | 3:20,216,755-20,217,015 | + | C1H3g02377 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004458 | 1:6,225,403-6,226,593 | + | C1H1g31834 | C2H1g09030 | LOC_Os01g12690 | Os01g0226700 | - | Detail |
| CX1g003172 | 1:6,233,383-6,235,295 | + | - | - | LOC_Os01g12700 | - | - | Detail |
| CX1g003495 | 1:6,241,767-6,250,246 | + | C1H1g16770 | C2H1g01170 | LOC_Os01g12710 | Os01g0227100 | - | Detail |
| CX1g000717 | 1:6,261,079-6,265,361 | + | C1H1g17285 | C2H1g13949 | LOC_Os01g12720 | Os01g0227200 | OsPERK1 | Detail |
| CX1g001842 | 1:6,266,652-6,269,760 | + | C1H1g25457 | C2H1g18702 | LOC_Os01g12730 | Os01g0227300 | - | Detail |
| CX1g005082 | 1:6,270,921-6,272,915 | + | C1H1g25274 | C2H1g07843 | LOC_Os01g12740 | Os01g0227400 | - | Detail |
| CX1g001031 | 1:6,275,691-6,278,696 | + | C1H1g23728 | C2H1g27903 | LOC_Os01g12750 | Os01g0227500 | - | Detail |
| CX1g005755 | 1:6,303,522-6,307,193 | + | C1H1g29762 | C2H1g18144 | LOC_Os01g12790 | Os01g0228200 | - | Detail |
| CX1g000008 | 1:6,307,731-6,310,624 | - | C1H1g00126 | C2H1g23747 | LOC_Os01g12800 | Os01g0228300 | - | Detail |
| CX1g001945 | 1:6,314,433-6,316,565 | + | C1H1g09783 | C2H1g03627 | LOC_Os01g12810 | Os01g0228400 | - | Detail |
| CX1g000835 | 1:6,317,214-6,318,719 | - | C1H1g01893 | C2H1g17734 | LOC_Os01g12820 | Os01g0228500 | - | Detail |
| CX1g004836 | 1:6,320,989-6,324,517 | - | C1H1g19893 | C2H1g24769 | LOC_Os01g12830 | Os01g0228600 | - | Detail |
| CX1g001640 | 1:6,327,813-6,330,643 | - | C1H1g14653 | C2H1g00699 | LOC_Os01g12840 | Os01g0228800 | - | Detail |
| CX1g006490 | 1:6,341,548-6,347,986 | + | C1H1g26396 | C2H1g15617 | LOC_Os01g12860 | Os01g0229000 | - | Detail |
| CX1g006720 | 1:6,350,120-6,353,250 | - | C1H1g13199 | C2H1g03922 | LOC_Os01g12870 | Os01g0229100 | - | Detail |
| CX1g003875 | 1:6,353,804-6,361,504 | + | C1H1g15790 | C2H1g14330 | LOC_Os01g12880 | Os01g0229200 | - | Detail |
| CX1g001622 | 1:6,385,112-6,389,787 | + | C1H1g29443 | C2H1g05009 | LOC_Os01g12890 | Os01g0229300 | CCP1, OsEMF1, DFO1, EMF1 | Detail |
| CX1g003284 | 1:6,391,193-6,393,541 | - | C1H1g08244 | C2H1g10198 | LOC_Os01g12900 | Os01g0229400 | RAC1, OsRAC1, OsRac1, Os Rac1 | Detail |
| CX1g003413 | 1:6,399,941-6,401,913 | + | C1H1g30145 | C2H1g13210 | LOC_Os01g12910 | Os01g0229500 | - | Detail |
| CX1g004766 | 1:6,402,707-6,403,441 | + | C1H1g25208 | C2H1g03678 | LOC_Os01g12920 | Os01g0229600 | - | Detail |