| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g20274 | 5:758,868-760,789 | + | C2H5g29361 | CX5g041152 | LOC_Os05g02460 | Os05g0115500 | - | Detail |
| C1H5g01075 | 5:762,339-763,317 | + | C2H5g02188 | CX5g040271 | LOC_Os05g02480 | Os05g0115600 | - | Detail |
| C1H5g06606 | 5:765,634-770,032 | + | C2H5g28025 | CX5g038640 | LOC_Os05g02490 | Os05g0115700 | - | Detail |
| C1H5g00700 | 5:772,499-774,814 | - | C2H5g08553 | CX5g038268 | LOC_Os05g02500 | Os05g0115800 | - | Detail |
| C1H5g21718 | 5:777,606-783,687 | - | C2H5g03564 | CX5g039461 | LOC_Os05g02510 | Os05g0115900 | - | Detail |
| C1H5g14722 | 5:786,866-790,086 | - | C2H5g29421 | CX5g037633 | LOC_Os05g02520 | Os05g0116000 | - | Detail |
| C1H5g00316 | 5:791,080-794,628 | - | C2H5g24397 | CX5g037620 | LOC_Os05g02530 | Os05g0116100 | OsDHAR | Detail |
| C1H5g27987 | 5:812,457-816,643 | + | C2H5g06610 | CX5g038728 | LOC_Os05g02580 | Os05g0116700 | - | Detail |
| C1H5g05174 | 5:823,852-824,559 | + | C2H5g21068 | CX5g037324 | LOC_Os05g02620 | Os05g0117000 | - | Detail |
| C1H5g12811 | 5:826,646-827,236 | + | C2H5g30499 | CX5g036973 | LOC_Os05g02630 | Os05g0117300 | - | Detail |
| C1H5g09619 | 5:829,681-833,242 | + | C2H5g02284 | CX5g040817 | LOC_Os05g02640 | Os05g0117500 | - | Detail |
| C1H5g10788 | 5:833,931-841,439 | + | C2H5g29091 | CX5g037847 | LOC_Os05g02650 | Os05g0117600 | - | Detail |
| C1H5g21607 | 5:848,541-855,152 | + | C2H5g25076 | CX5g040345 | LOC_Os05g02670 | Os05g0117798 | - | Detail |
| C1H5g13581 | 5:856,610-860,416 | - | C2H5g23113 | CX5g036699 | LOC_Os05g02680 | Os05g0117864 | - | Detail |
| C1H5g04400 | 5:879,191-880,118 | + | C2H5g23844 | CX5g039032 | LOC_Os05g02730 | Os05g0118700 | LSY1, OsWOX3 | Detail |
| C1H5g07583 | 5:909,067-909,827 | - | C2H5g07908 | CX5g037492 | LOC_Os05g02770 | Os05g0119200 | OsGPRP3 | Detail |
| C1H5g14848 | 5:911,881-914,028 | - | C2H5g12083 | CX5g036862 | LOC_Os05g02780 | - | - | Detail |
| C1H5g27829 | 5:914,591-919,050 | + | C2H5g19310 | - | - | Os05g0119350 | - | Detail |
| C1H5g12144 | 5:915,225-919,418 | - | C2H5g27633 | CX5g038855 | LOC_Os05g02790 | Os05g0119400 | - | Detail |
| C1H5g31502 | 5:921,562-923,469 | + | C2H5g28586 | CX5g039714 | LOC_Os05g02810 | Os05g0119600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004458 | 1:6,225,403-6,226,593 | + | C1H1g31834 | C2H1g09030 | LOC_Os01g12690 | Os01g0226700 | - | Detail |
| CX1g003172 | 1:6,233,383-6,235,295 | + | - | - | LOC_Os01g12700 | - | - | Detail |
| CX1g003495 | 1:6,241,767-6,250,246 | + | C1H1g16770 | C2H1g01170 | LOC_Os01g12710 | Os01g0227100 | - | Detail |
| CX1g000717 | 1:6,261,079-6,265,361 | + | C1H1g17285 | C2H1g13949 | LOC_Os01g12720 | Os01g0227200 | OsPERK1 | Detail |
| CX1g001842 | 1:6,266,652-6,269,760 | + | C1H1g25457 | C2H1g18702 | LOC_Os01g12730 | Os01g0227300 | - | Detail |
| CX1g005082 | 1:6,270,921-6,272,915 | + | C1H1g25274 | C2H1g07843 | LOC_Os01g12740 | Os01g0227400 | - | Detail |
| CX1g001031 | 1:6,275,691-6,278,696 | + | C1H1g23728 | C2H1g27903 | LOC_Os01g12750 | Os01g0227500 | - | Detail |
| CX1g005755 | 1:6,303,522-6,307,193 | + | C1H1g29762 | C2H1g18144 | LOC_Os01g12790 | Os01g0228200 | - | Detail |
| CX1g000008 | 1:6,307,731-6,310,624 | - | C1H1g00126 | C2H1g23747 | LOC_Os01g12800 | Os01g0228300 | - | Detail |
| CX1g001945 | 1:6,314,433-6,316,565 | + | C1H1g09783 | C2H1g03627 | LOC_Os01g12810 | Os01g0228400 | - | Detail |
| CX1g000835 | 1:6,317,214-6,318,719 | - | C1H1g01893 | C2H1g17734 | LOC_Os01g12820 | Os01g0228500 | - | Detail |
| CX1g004836 | 1:6,320,989-6,324,517 | - | C1H1g19893 | C2H1g24769 | LOC_Os01g12830 | Os01g0228600 | - | Detail |
| CX1g001640 | 1:6,327,813-6,330,643 | - | C1H1g14653 | C2H1g00699 | LOC_Os01g12840 | Os01g0228800 | - | Detail |
| CX1g006490 | 1:6,341,548-6,347,986 | + | C1H1g26396 | C2H1g15617 | LOC_Os01g12860 | Os01g0229000 | - | Detail |
| CX1g006720 | 1:6,350,120-6,353,250 | - | C1H1g13199 | C2H1g03922 | LOC_Os01g12870 | Os01g0229100 | - | Detail |
| CX1g003875 | 1:6,353,804-6,361,504 | + | C1H1g15790 | C2H1g14330 | LOC_Os01g12880 | Os01g0229200 | - | Detail |
| CX1g001622 | 1:6,385,112-6,389,787 | + | C1H1g29443 | C2H1g05009 | LOC_Os01g12890 | Os01g0229300 | CCP1, OsEMF1, DFO1, EMF1 | Detail |
| CX1g003284 | 1:6,391,193-6,393,541 | - | C1H1g08244 | C2H1g10198 | LOC_Os01g12900 | Os01g0229400 | RAC1, OsRAC1, OsRac1, Os Rac1 | Detail |
| CX1g003413 | 1:6,399,941-6,401,913 | + | C1H1g30145 | C2H1g13210 | LOC_Os01g12910 | Os01g0229500 | - | Detail |
| CX1g004766 | 1:6,402,707-6,403,441 | + | C1H1g25208 | C2H1g03678 | LOC_Os01g12920 | Os01g0229600 | - | Detail |