| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g24909 | 9:14,846,359-14,847,618 | - | C2H9g14620 | CX9g055547 | LOC_Os09g29600 | Os09g0471800 | OsWAK85 | Detail |
| C1H9g08939 | 9:14,873,382-14,878,140 | + | C2H9g29453 | CX9g057043 | LOC_Os09g29660 | Os09g0472100 | - | Detail |
| C1H9g25191 | 9:14,883,948-14,889,719 | + | C2H9g26402 | CX9g056707 | LOC_Os09g29670 | Os09g0472200 | - | Detail |
| C1H9g02840 | 9:14,891,956-14,892,637 | + | C2H9g29601 | CX9g055667 | LOC_Os09g29690 | Os09g0472700 | - | Detail |
| C1H9g11474 | 9:14,899,038-14,899,655 | + | C2H9g12229 | CX9g055667 | LOC_Os09g29710 | Os09g0472900 | - | Detail |
| C1H9g11232 | 9:14,903,679-14,904,092 | + | C2H9g11881 | CX9g055667 | LOC_Os09g29690 | Os09g0473200 | - | Detail |
| C1H9g17348 | 9:14,904,523-14,909,604 | - | C2H9g28895 | CX9g056808 | LOC_Os09g29750 | Os09g0473300 | - | Detail |
| C1H9g19271 | 9:14,909,880-14,911,079 | + | C2H9g16579 | CX9g056261 | LOC_Os09g29760 | Os09g0473400 | Fse5, OsPORR1 | Detail |
| C1H9g18707 | 9:14,915,404-14,915,865 | + | C2H8g10262 | CX9g056493 | LOC_Os08g37990 | Os09g0473600 | - | Detail |
| C1H9g17076 | 9:14,917,725-14,917,880 | - | C2H9g04747 | - | - | - | - | Detail |
| C1H9g00063 | 9:14,918,434-14,928,008 | - | C2H9g03320 | CX9g056116 | LOC_Os09g29790 | Os09g0417500 | - | Detail |
| C1H9g11476 | 9:14,932,934-14,936,882 | + | C2H9g13471 | CX9g057774 | LOC_Os09g29810 | Os09g0473966 | - | Detail |
| C1H9g27680 | 9:14,932,944-14,938,343 | - | - | - | - | Os09g0473883 | - | Detail |
| C1H9g22246 | 9:14,938,588-14,939,109 | - | C2H9g26403 | CX9g054922 | LOC_Os09g29820 | Os09g0474000 | OsbZIP73, bZIP73, OsTFX1 | Detail |
| C1H9g25193 | 9:14,950,591-14,955,413 | + | C2H9g08999 | CX9g058110 | LOC_Os09g29825 | Os09g0474051 | DUA1 | Detail |
| C1H9g24853 | 9:14,957,509-14,959,737 | + | C2H9g23427 | CX9g058110 | LOC_Os09g29830 | Os09g0474100 | - | Detail |
| C1H9g14949 | 9:14,974,346-14,978,918 | - | C2H9g15882 | CX9g057166 | LOC_Os09g29840 | Os09g0474300 | - | Detail |
| C1H9g14207 | 9:14,990,329-14,994,322 | - | C2H9g10726 | CX9g056993 | LOC_Os09g29890 | Os09g0474800 | - | Detail |
| C1H9g23626 | 9:15,013,429-15,020,772 | + | C2H9g06983 | CX9g055532 | LOC_Os09g29930 | Os09g0475400 | - | Detail |
| C1H9g21243 | 9:15,023,361-15,026,968 | - | C2H9g17530 | CX9g055718 | LOC_Os09g29940 | Os09g0475500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004458 | 1:6,225,403-6,226,593 | + | C1H1g31834 | C2H1g09030 | LOC_Os01g12690 | Os01g0226700 | - | Detail |
| CX1g003172 | 1:6,233,383-6,235,295 | + | - | - | LOC_Os01g12700 | - | - | Detail |
| CX1g003495 | 1:6,241,767-6,250,246 | + | C1H1g16770 | C2H1g01170 | LOC_Os01g12710 | Os01g0227100 | - | Detail |
| CX1g000717 | 1:6,261,079-6,265,361 | + | C1H1g17285 | C2H1g13949 | LOC_Os01g12720 | Os01g0227200 | OsPERK1 | Detail |
| CX1g001842 | 1:6,266,652-6,269,760 | + | C1H1g25457 | C2H1g18702 | LOC_Os01g12730 | Os01g0227300 | - | Detail |
| CX1g005082 | 1:6,270,921-6,272,915 | + | C1H1g25274 | C2H1g07843 | LOC_Os01g12740 | Os01g0227400 | - | Detail |
| CX1g001031 | 1:6,275,691-6,278,696 | + | C1H1g23728 | C2H1g27903 | LOC_Os01g12750 | Os01g0227500 | - | Detail |
| CX1g005755 | 1:6,303,522-6,307,193 | + | C1H1g29762 | C2H1g18144 | LOC_Os01g12790 | Os01g0228200 | - | Detail |
| CX1g000008 | 1:6,307,731-6,310,624 | - | C1H1g00126 | C2H1g23747 | LOC_Os01g12800 | Os01g0228300 | - | Detail |
| CX1g001945 | 1:6,314,433-6,316,565 | + | C1H1g09783 | C2H1g03627 | LOC_Os01g12810 | Os01g0228400 | - | Detail |
| CX1g000835 | 1:6,317,214-6,318,719 | - | C1H1g01893 | C2H1g17734 | LOC_Os01g12820 | Os01g0228500 | - | Detail |
| CX1g004836 | 1:6,320,989-6,324,517 | - | C1H1g19893 | C2H1g24769 | LOC_Os01g12830 | Os01g0228600 | - | Detail |
| CX1g001640 | 1:6,327,813-6,330,643 | - | C1H1g14653 | C2H1g00699 | LOC_Os01g12840 | Os01g0228800 | - | Detail |
| CX1g006490 | 1:6,341,548-6,347,986 | + | C1H1g26396 | C2H1g15617 | LOC_Os01g12860 | Os01g0229000 | - | Detail |
| CX1g006720 | 1:6,350,120-6,353,250 | - | C1H1g13199 | C2H1g03922 | LOC_Os01g12870 | Os01g0229100 | - | Detail |
| CX1g003875 | 1:6,353,804-6,361,504 | + | C1H1g15790 | C2H1g14330 | LOC_Os01g12880 | Os01g0229200 | - | Detail |
| CX1g001622 | 1:6,385,112-6,389,787 | + | C1H1g29443 | C2H1g05009 | LOC_Os01g12890 | Os01g0229300 | CCP1, OsEMF1, DFO1, EMF1 | Detail |
| CX1g003284 | 1:6,391,193-6,393,541 | - | C1H1g08244 | C2H1g10198 | LOC_Os01g12900 | Os01g0229400 | RAC1, OsRAC1, OsRac1, Os Rac1 | Detail |
| CX1g003413 | 1:6,399,941-6,401,913 | + | C1H1g30145 | C2H1g13210 | LOC_Os01g12910 | Os01g0229500 | - | Detail |
| CX1g004766 | 1:6,402,707-6,403,441 | + | C1H1g25208 | C2H1g03678 | LOC_Os01g12920 | Os01g0229600 | - | Detail |