| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g15688 | 4:13,896,547-13,897,079 | - | C1H4g07589 | CX4g032851 | - | - | - | Detail |
| C2H4g22024 | 4:13,900,089-13,901,452 | + | C1H4g08073 | CX4g034059 | LOC_Os04g27860 | Os04g0346100 | - | Detail |
| C2H4g10199 | 4:13,907,898-13,909,896 | + | C1H4g22890 | CX4g036065 | - | Os04g0346800 | - | Detail |
| C2H4g07726 | 4:13,919,132-13,922,896 | - | C1H4g23098 | CX4g036207 | LOC_Os04g27960 | Os04g0346900 | - | Detail |
| C2H4g06173 | 4:13,928,229-13,929,547 | - | C1H4g05778 | CX4g036626 | LOC_Os04g27980 | Os04g0347200 | - | Detail |
| C2H4g25025 | 4:13,938,725-13,942,081 | + | C1H4g08969 | CX4g036238 | LOC_Os04g27990 | Os04g0347400 | - | Detail |
| C2H4g18236 | 4:13,945,140-13,951,887 | + | C1H4g15107 | CX4g033642 | LOC_Os04g28010 | Os04g0347600 | - | Detail |
| C2H4g23758 | 4:13,986,253-13,989,174 | + | C1H4g21081 | CX4g032578 | - | Os04g0470500 | - | Detail |
| C2H4g16562 | 4:14,019,386-14,026,335 | + | C1H4g19418 | CX4g032157 | LOC_Os04g28020 | Os04g0347800 | PRD1 | Detail |
| C2H4g25578 | 4:14,034,243-14,039,890 | + | C1H4g22332 | CX4g033951 | LOC_Os04g28040 | Os04g0347900 | - | Detail |
| C2H4g27022 | 4:14,041,795-14,042,022 | + | - | - | - | - | - | Detail |
| C2H4g20901 | 4:14,042,455-14,046,231 | + | C1H4g13797 | CX4g033086 | LOC_Os04g28050 | Os04g0348000 | - | Detail |
| C2H4g08837 | 4:14,046,945-14,050,693 | - | C1H4g24314 | CX4g034188 | LOC_Os04g28060 | Os04g0348100 | - | Detail |
| C2H4g13837 | 4:14,061,263-14,068,642 | + | C1H4g16463 | CX4g035633 | LOC_Os04g28090 | Os04g0348300 | - | Detail |
| C2H4g14798 | 4:14,073,246-14,076,290 | - | C1H4g18035 | CX4g036157 | LOC_Os04g28100 | Os04g0348400 | OsPUB7 | Detail |
| C2H4g14319 | 4:14,084,995-14,087,363 | + | C1H4g07136 | - | LOC_Os04g28120 | Os04g0348600 | - | Detail |
| C2H4g18470 | 4:14,096,490-14,099,680 | + | C1H4g27011 | CX4g035143 | LOC_Os04g28130 | Os04g0348800 | - | Detail |
| C2H4g29280 | 4:14,123,882-14,127,032 | + | C1H4g23299 | - | LOC_Os04g28160 | Os04g0348800 | - | Detail |
| C2H4g00376 | 4:14,134,427-14,137,359 | - | C1H4g18144 | CX4g035408 | LOC_Os04g28170 | Os04g0349401 | - | Detail |
| C2H4g26754 | 4:14,140,148-14,142,426 | - | C1H4g07697 | CX4g032516 | LOC_Os04g28180 | Os04g0349500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001394 | 1:6,046,563-6,049,432 | + | C1H1g07004 | C2H1g14688 | LOC_Os01g12470 | Os01g0224400 | - | Detail |
| CX1g003539 | 1:6,051,195-6,052,838 | - | C1H1g12177 | C2H1g11914 | LOC_Os01g12480 | Os01g0224500 | - | Detail |
| CX1g006944 | 1:6,066,638-6,066,826 | - | - | - | - | Os05g0536101 | - | Detail |
| CX1g002397 | 1:6,068,517-6,071,568 | + | C1H1g07815 | C2H1g03625 | LOC_Os01g12490 | Os01g0224700 | YUCCA4, OsYUCCA4, OsYUC4, YUC4 | Detail |
| CX1g005063 | 1:6,093,446-6,095,503 | - | C1H1g11599 | C2H1g01358 | LOC_Os01g12520 | Os01g0225000 | - | Detail |
| CX1g001955 | 1:6,103,518-6,110,324 | + | C1H1g06137 | C2H1g06869 | LOC_Os01g12530 | Os01g0225100 | - | Detail |
| CX1g004081 | 1:6,112,074-6,118,345 | + | C1H1g01658 | C2H1g08071 | LOC_Os01g12540 | Os01g0225200 | - | Detail |
| CX1g000643 | 1:6,119,157-6,123,586 | + | C1H1g10876 | C2H1g21338 | LOC_Os01g12550 | Os01g0225300 | - | Detail |
| CX1g000722 | 1:6,124,906-6,127,044 | - | C1H1g09440 | C2H1g20462 | LOC_Os01g12560 | Os01g0225400 | - | Detail |
| CX1g001058 | 1:6,128,008-6,130,008 | - | C1H1g18546 | C2H1g08221 | LOC_Os01g12570 | Os01g0225500 | - | Detail |
| CX1g004401 | 1:6,151,688-6,152,143 | - | - | C2H1g14460 | LOC_Os01g12580 | Os01g0225600 | OsLea14-A | Detail |
| CX1g002295 | 1:6,153,570-6,157,062 | - | - | - | - | - | - | Detail |
| CX1g003871 | 1:6,164,486-6,164,896 | - | - | - | - | - | - | Detail |
| CX1g003331 | 1:6,171,895-6,173,218 | - | - | C2H1g14647 | LOC_Os01g12640 | Os01g0226200 | - | Detail |
| CX1g001937 | 1:6,177,462-6,177,827 | - | C1H11g06426 | C2H1g27972 | - | Os07g0658500 | - | Detail |
| CX1g006827 | 1:6,181,050-6,181,358 | - | - | - | - | - | - | Detail |
| CX1g004850 | 1:6,184,694-6,186,771 | + | C1H1g06023 | C2H1g26314 | LOC_Os01g12650 | Os01g0226300 | - | Detail |
| CX1g002355 | 1:6,188,075-6,193,479 | - | C1H1g23194 | C2H1g13868 | LOC_Os01g12660 | Os01g0226400 | - | Detail |
| CX1g000068 | 1:6,196,721-6,200,295 | + | C1H1g24866 | C2H1g02547 | LOC_Os01g12670 | Os01g0226500 | - | Detail |
| CX1g004471 | 1:6,207,331-6,210,165 | + | C1H1g15047 | C2H1g29977 | LOC_Os01g12680 | Os01g0226600 | - | Detail |