| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21643 | 3:28,491,836-28,505,760 | + | C1H3g11086 | CX3g030684 | LOC_Os03g54770 | Os03g0754900 | - | Detail |
| C2H3g18088 | 3:28,506,761-28,512,053 | + | C1H3g02500 | CX3g030008 | LOC_Os03g54790 | Os03g0755900 | - | Detail |
| C2H3g29659 | 3:28,515,320-28,519,064 | + | C1H3g16167 | CX3g026242 | LOC_Os03g54850 | Os03g0755600 | - | Detail |
| C2H3g29648 | 3:28,521,760-28,525,296 | + | C1H3g02500 | CX3g030008 | LOC_Os03g54790 | Os03g0755900 | - | Detail |
| C2H3g30501 | 3:28,530,119-28,531,769 | + | C1H3g23278 | CX7g046958 | LOC_Os03g54890 | Os03g0756000 | - | Detail |
| C2H3g18957 | 3:28,533,934-28,538,889 | - | C1H3g18285 | CX3g029420 | LOC_Os03g54900 | Os03g0756200 | - | Detail |
| C2H3g16088 | 3:28,543,554-28,545,513 | - | C1H3g24157 | CX3g031296 | LOC_Os03g54910 | Os03g0756300 | - | Detail |
| C2H3g07304 | 3:28,547,505-28,550,527 | - | C1H3g08569 | CX3g026830 | LOC_Os03g54920 | Os03g0756400 | - | Detail |
| C2H3g22264 | 3:28,552,073-28,558,440 | - | C1H3g25183 | CX3g027104 | LOC_Os03g54930 | Os03g0756500 | - | Detail |
| C2H3g18479 | 3:28,563,366-28,568,661 | - | C1H3g07989 | CX3g027732 | LOC_Os03g54970 | Os03g0756700 | - | Detail |
| C2H3g11581 | 3:28,568,836-28,572,802 | + | C1H3g04866 | CX3g030336 | LOC_Os03g54980 | Os03g0756800 | - | Detail |
| C2H3g13706 | 3:28,580,632-28,581,911 | + | C1H3g20524 | CX3g026521 | LOC_Os03g55010 | Os03g0757200 | - | Detail |
| C2H3g16997 | 3:28,583,103-28,583,948 | + | C1H3g18325 | CX3g025853 | LOC_Os03g55010 | Os03g0757200 | - | Detail |
| C2H3g11257 | 3:28,589,504-28,592,649 | + | C1H3g15265 | CX3g028049 | LOC_Os03g55010 | Os03g0757200 | - | Detail |
| C2H3g25803 | 3:28,593,857-28,595,242 | + | C1H3g28838 | CX3g028049 | LOC_Os03g55020 | Os03g0757100 | - | Detail |
| C2H3g12902 | 3:28,595,873-28,597,384 | + | C1H3g16314 | CX3g028049 | LOC_Os03g55040 | Os03g0757500 | GSA1 | Detail |
| C2H3g07075 | 3:28,599,250-28,600,694 | + | C1H3g22534 | CX3g028049 | LOC_Os03g55050 | Os03g0757600 | - | Detail |
| C2H3g15309 | 3:28,615,404-28,616,846 | + | C1H3g18474 | CX3g031235 | LOC_Os03g55070 | Os03g0757900 | - | Detail |
| C2H3g28463 | 3:28,622,372-28,625,324 | - | C1H3g02197 | CX3g026009 | LOC_Os03g55080 | Os03g0758050 | - | Detail |
| C2H3g07139 | 3:28,630,307-28,637,427 | - | C1H3g12323 | CX3g028301 | LOC_Os03g55090 | Os03g0758100 | OsPho1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001394 | 1:6,046,563-6,049,432 | + | C1H1g07004 | C2H1g14688 | LOC_Os01g12470 | Os01g0224400 | - | Detail |
| CX1g003539 | 1:6,051,195-6,052,838 | - | C1H1g12177 | C2H1g11914 | LOC_Os01g12480 | Os01g0224500 | - | Detail |
| CX1g006944 | 1:6,066,638-6,066,826 | - | - | - | - | Os05g0536101 | - | Detail |
| CX1g002397 | 1:6,068,517-6,071,568 | + | C1H1g07815 | C2H1g03625 | LOC_Os01g12490 | Os01g0224700 | YUCCA4, OsYUCCA4, OsYUC4, YUC4 | Detail |
| CX1g005063 | 1:6,093,446-6,095,503 | - | C1H1g11599 | C2H1g01358 | LOC_Os01g12520 | Os01g0225000 | - | Detail |
| CX1g001955 | 1:6,103,518-6,110,324 | + | C1H1g06137 | C2H1g06869 | LOC_Os01g12530 | Os01g0225100 | - | Detail |
| CX1g004081 | 1:6,112,074-6,118,345 | + | C1H1g01658 | C2H1g08071 | LOC_Os01g12540 | Os01g0225200 | - | Detail |
| CX1g000643 | 1:6,119,157-6,123,586 | + | C1H1g10876 | C2H1g21338 | LOC_Os01g12550 | Os01g0225300 | - | Detail |
| CX1g000722 | 1:6,124,906-6,127,044 | - | C1H1g09440 | C2H1g20462 | LOC_Os01g12560 | Os01g0225400 | - | Detail |
| CX1g001058 | 1:6,128,008-6,130,008 | - | C1H1g18546 | C2H1g08221 | LOC_Os01g12570 | Os01g0225500 | - | Detail |
| CX1g004401 | 1:6,151,688-6,152,143 | - | - | C2H1g14460 | LOC_Os01g12580 | Os01g0225600 | OsLea14-A | Detail |
| CX1g002295 | 1:6,153,570-6,157,062 | - | - | - | - | - | - | Detail |
| CX1g003871 | 1:6,164,486-6,164,896 | - | - | - | - | - | - | Detail |
| CX1g003331 | 1:6,171,895-6,173,218 | - | - | C2H1g14647 | LOC_Os01g12640 | Os01g0226200 | - | Detail |
| CX1g001937 | 1:6,177,462-6,177,827 | - | C1H11g06426 | C2H1g27972 | - | Os07g0658500 | - | Detail |
| CX1g006827 | 1:6,181,050-6,181,358 | - | - | - | - | - | - | Detail |
| CX1g004850 | 1:6,184,694-6,186,771 | + | C1H1g06023 | C2H1g26314 | LOC_Os01g12650 | Os01g0226300 | - | Detail |
| CX1g002355 | 1:6,188,075-6,193,479 | - | C1H1g23194 | C2H1g13868 | LOC_Os01g12660 | Os01g0226400 | - | Detail |
| CX1g000068 | 1:6,196,721-6,200,295 | + | C1H1g24866 | C2H1g02547 | LOC_Os01g12670 | Os01g0226500 | - | Detail |
| CX1g004471 | 1:6,207,331-6,210,165 | + | C1H1g15047 | C2H1g29977 | LOC_Os01g12680 | Os01g0226600 | - | Detail |