| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g16290 | 5:21,341,723-21,341,956 | + | C2H5g16659 | - | LOC_Os05g44960 | Os05g0525000 | - | Detail |
| C1H5g14866 | 5:21,343,710-21,344,462 | + | C2H5g23307 | CX5g040988 | LOC_Os05g44970 | Os05g0525400 | - | Detail |
| C1H5g23384 | 5:21,344,614-21,347,778 | + | C2H5g03953 | CX5g040304 | LOC_Os05g44970 | Os05g0525400 | - | Detail |
| C1H5g18544 | 5:21,350,135-21,354,585 | + | C2H5g04481 | CX5g040988 | LOC_Os05g44990 | Os05g0525600 | - | Detail |
| C1H5g12584 | 5:21,356,501-21,357,249 | + | C2H5g27337 | CX5g040988 | LOC_Os05g45000 | Os05g0525800 | - | Detail |
| C1H5g03829 | 5:21,357,423-21,360,599 | + | C2H5g02990 | CX5g040988 | LOC_Os05g44970 | Os05g0525800 | - | Detail |
| C1H5g07604 | 5:21,366,806-21,367,573 | - | C2H5g01621 | CX5g038372 | LOC_Os05g45020 | Os05g0525900 | OsTZF7 | Detail |
| C1H5g15368 | 5:21,372,164-21,373,640 | + | C2H5g22363 | CX5g036751 | LOC_Os05g45030 | Os05g0526200 | - | Detail |
| C1H5g20668 | 5:21,374,134-21,376,374 | + | C2H5g03491 | CX5g037780 | LOC_Os05g45040 | Os05g0526300 | - | Detail |
| C1H5g25174 | 5:21,377,023-21,379,045 | - | C2H5g05444 | CX5g040740 | LOC_Os05g45050 | Os05g0526400 | - | Detail |
| C1H5g10756 | 5:21,383,195-21,383,818 | + | C2H5g24922 | CX5g038766 | LOC_Os05g45060 | Os05g0526600 | - | Detail |
| C1H5g11126 | 5:21,383,966-21,384,391 | - | C2H5g27900 | - | - | - | - | Detail |
| C1H5g13393 | 5:21,386,430-21,387,197 | - | C2H5g25281 | CX5g038511 | LOC_Os05g45070 | Os05g0526700 | - | Detail |
| C1H5g25146 | 5:21,389,368-21,390,810 | + | C2H5g08108 | CX5g040432 | LOC_Os05g45080 | Os05g0526800 | - | Detail |
| C1H5g26327 | 5:21,392,633-21,394,066 | + | C2H5g26808 | CX5g040244 | LOC_Os05g45090 | Os05g0526900 | - | Detail |
| C1H5g20580 | 5:21,394,809-21,396,227 | - | C2H5g25884 | CX5g040432 | LOC_Os05g45100 | Os05g0527000 | - | Detail |
| C1H5g23017 | 5:21,396,766-21,398,515 | - | - | CX5g038691 | - | - | - | Detail |
| C1H5g03469 | 5:21,400,929-21,402,246 | + | - | - | - | - | - | Detail |
| C1H5g02470 | 5:21,404,286-21,405,704 | - | C2H5g16916 | CX5g040432 | LOC_Os05g45110 | Os05g0527100 | LTG5 | Detail |
| C1H5g26656 | 5:21,408,398-21,409,855 | - | C2H5g26267 | CX5g040432 | LOC_Os05g45140 | Os05g0527200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001394 | 1:6,046,563-6,049,432 | + | C1H1g07004 | C2H1g14688 | LOC_Os01g12470 | Os01g0224400 | - | Detail |
| CX1g003539 | 1:6,051,195-6,052,838 | - | C1H1g12177 | C2H1g11914 | LOC_Os01g12480 | Os01g0224500 | - | Detail |
| CX1g006944 | 1:6,066,638-6,066,826 | - | - | - | - | Os05g0536101 | - | Detail |
| CX1g002397 | 1:6,068,517-6,071,568 | + | C1H1g07815 | C2H1g03625 | LOC_Os01g12490 | Os01g0224700 | YUCCA4, OsYUCCA4, OsYUC4, YUC4 | Detail |
| CX1g005063 | 1:6,093,446-6,095,503 | - | C1H1g11599 | C2H1g01358 | LOC_Os01g12520 | Os01g0225000 | - | Detail |
| CX1g001955 | 1:6,103,518-6,110,324 | + | C1H1g06137 | C2H1g06869 | LOC_Os01g12530 | Os01g0225100 | - | Detail |
| CX1g004081 | 1:6,112,074-6,118,345 | + | C1H1g01658 | C2H1g08071 | LOC_Os01g12540 | Os01g0225200 | - | Detail |
| CX1g000643 | 1:6,119,157-6,123,586 | + | C1H1g10876 | C2H1g21338 | LOC_Os01g12550 | Os01g0225300 | - | Detail |
| CX1g000722 | 1:6,124,906-6,127,044 | - | C1H1g09440 | C2H1g20462 | LOC_Os01g12560 | Os01g0225400 | - | Detail |
| CX1g001058 | 1:6,128,008-6,130,008 | - | C1H1g18546 | C2H1g08221 | LOC_Os01g12570 | Os01g0225500 | - | Detail |
| CX1g004401 | 1:6,151,688-6,152,143 | - | - | C2H1g14460 | LOC_Os01g12580 | Os01g0225600 | OsLea14-A | Detail |
| CX1g002295 | 1:6,153,570-6,157,062 | - | - | - | - | - | - | Detail |
| CX1g003871 | 1:6,164,486-6,164,896 | - | - | - | - | - | - | Detail |
| CX1g003331 | 1:6,171,895-6,173,218 | - | - | C2H1g14647 | LOC_Os01g12640 | Os01g0226200 | - | Detail |
| CX1g001937 | 1:6,177,462-6,177,827 | - | C1H11g06426 | C2H1g27972 | - | Os07g0658500 | - | Detail |
| CX1g006827 | 1:6,181,050-6,181,358 | - | - | - | - | - | - | Detail |
| CX1g004850 | 1:6,184,694-6,186,771 | + | C1H1g06023 | C2H1g26314 | LOC_Os01g12650 | Os01g0226300 | - | Detail |
| CX1g002355 | 1:6,188,075-6,193,479 | - | C1H1g23194 | C2H1g13868 | LOC_Os01g12660 | Os01g0226400 | - | Detail |
| CX1g000068 | 1:6,196,721-6,200,295 | + | C1H1g24866 | C2H1g02547 | LOC_Os01g12670 | Os01g0226500 | - | Detail |
| CX1g004471 | 1:6,207,331-6,210,165 | + | C1H1g15047 | C2H1g29977 | LOC_Os01g12680 | Os01g0226600 | - | Detail |