| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g15337 | 4:2,989,404-2,990,624 | - | C2H4g06548 | CX4g035400 | LOC_Os04g07830 | Os04g0160600 | - | Detail |
| C1H4g12963 | 4:3,035,202-3,037,424 | + | C2H4g27562 | CX4g033885 | LOC_Os04g07890 | Os04g0161100 | - | Detail |
| C1H4g07373 | 4:3,044,478-3,046,000 | + | C2H4g26223 | CX4g033924 | LOC_Os04g07920 | Os04g0161400 | - | Detail |
| C1H4g07816 | 4:3,050,056-3,050,562 | + | - | CX4g033208 | LOC_Os04g07930 | - | - | Detail |
| C1H4g24705 | 4:3,078,723-3,078,983 | + | - | - | - | - | - | Detail |
| C1H4g19033 | 4:3,092,889-3,108,684 | + | C2H4g10368 | CX4g034915 | LOC_Os04g08034 | Os04g0162100 | - | Detail |
| C1H4g24860 | 4:3,114,200-3,115,455 | - | C2H4g30421 | - | - | - | - | Detail |
| C1H4g29541 | 4:3,114,306-3,115,346 | + | C2H4g24447 | CX4g032410 | LOC_Os04g08060 | Os04g0162500 | - | Detail |
| C1H4g24154 | 4:3,123,935-3,124,225 | + | C2H4g00154 | CX4g031783 | - | - | - | Detail |
| C1H4g13417 | 4:3,129,489-3,130,697 | - | C2H4g09598 | CX4g031910 | LOC_Os04g08070 | Os04g0162600 | - | Detail |
| C1H4g29100 | 4:3,141,020-3,142,960 | + | C2H4g27755 | CX4g031878 | LOC_Os04g08080 | Os04g0162800 | - | Detail |
| C1H4g17619 | 4:3,143,047-3,143,274 | + | C2H4g27755 | CX4g031878 | LOC_Os04g08080 | Os04g0162800 | - | Detail |
| C1H4g24485 | 4:3,149,535-3,150,746 | - | C2H4g09598 | CX4g031910 | LOC_Os04g08070 | Os04g0162600 | - | Detail |
| C1H4g00901 | 4:3,163,608-3,164,791 | + | C2H4g18612 | - | LOC_Os04g08180 | - | - | Detail |
| C1H4g25842 | 4:3,167,124-3,170,776 | + | C2H4g29845 | CX4g033256 | LOC_Os04g08190 | Os04g0163800 | - | Detail |
| C1H4g09408 | 4:3,167,301-3,167,720 | - | C2H4g24428 | CX4g033304 | - | Os04g0155750 | - | Detail |
| C1H4g05235 | 4:3,174,722-3,176,929 | - | C2H4g27755 | CX4g032360 | LOC_Os04g08200 | Os04g0162800 | - | Detail |
| C1H4g02074 | 4:3,189,244-3,190,563 | - | C2H4g09598 | CX4g031910 | LOC_Os04g08250 | Os04g0164701 | - | Detail |
| C1H4g06415 | 4:3,193,333-3,206,423 | + | C2H4g26409 | CX4g034642 | - | Os04g0164900 | - | Detail |
| C1H4g23865 | 4:3,208,108-3,209,701 | - | C2H4g26447 | CX4g033506 | - | Os04g0165000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g012383 | 11:6,785,218-6,790,746 | - | C1H11g17645 | C2H11g13626 | LOC_Os11g14070 | Os11g0245500 | - | Detail |
| CX11g013200 | 11:6,799,439-6,802,662 | - | C1H11g06906 | C2H11g27352 | LOC_Os11g14080 | Os11g0543500 | - | Detail |
| CX11g013795 | 11:6,814,393-6,821,263 | + | C1H11g13649 | C2H11g23405 | LOC_Os11g14110 | Os11g0245800 | - | Detail |
| CX11g014051 | 11:6,835,167-6,836,249 | + | C1H11g30708 | C2H11g24729 | LOC_Os11g14130 | Os11g0246100 | - | Detail |
| CX11g014151 | 11:6,844,224-6,845,369 | - | C1H11g18979 | C2H11g00433 | LOC_Os11g14140 | Os11g0246200 | - | Detail |
| CX11g011999 | 11:6,883,926-6,885,219 | - | C1H11g22516 | C2H11g25580 | - | - | - | Detail |
| CX11g013274 | 11:6,886,473-6,893,909 | + | C1H11g25281 | C2H11g25244 | LOC_Os11g14170 | Os11g0246600 | - | Detail |
| CX11g012277 | 11:6,914,154-6,917,214 | + | C1H11g14626 | C2H11g07265 | LOC_Os11g14180 | Os11g0246900 | - | Detail |
| CX11g012435 | 11:6,920,796-6,921,113 | - | C1H11g12845 | - | LOC_Os11g14190 | Os11g0247000 | - | Detail |
| CX11g012812 | 11:6,932,509-6,932,712 | + | - | - | - | - | - | Detail |
| CX11g013765 | 11:6,940,269-6,942,745 | + | C1H11g06552 | C2H11g17409 | LOC_Os11g14220 | Os11g0247300 | TID1, TubA2, SRS5, OS-TubA2 | Detail |
| CX11g012100 | 11:6,943,797-6,947,922 | - | C1H11g12834 | C2H11g28605 | LOC_Os11g14230 | Os11g0247400 | - | Detail |
| CX11g013083 | 11:6,950,860-6,952,656 | - | C1H11g28559 | C2H11g05156 | LOC_Os11g14240 | Os11g0247500 | - | Detail |
| CX11g010933 | 11:6,970,113-6,972,921 | - | C1H11g08897 | C2H11g20743 | LOC_Os11g14280 | - | - | Detail |
| CX11g011417 | 11:6,990,451-6,998,495 | - | C1H11g01997 | C2H11g22431 | LOC_Os11g14300 | Os11g0248200 | - | Detail |
| CX11g011941 | 11:7,000,740-7,004,158 | - | C1H11g16961 | C2H11g10309 | LOC_Os11g14400 | Os11g0249400 | - | Detail |
| CX11g013279 | 11:7,014,357-7,016,007 | - | C1H11g04655 | C2H11g22945 | LOC_Os11g14410 | Os11g0249600 | - | Detail |
| CX11g012699 | 11:7,020,021-7,022,447 | + | C1H11g31301 | C2H11g16345 | LOC_Os11g14420 | Os11g0249900 | - | Detail |
| CX11g013160 | 11:7,024,584-7,028,780 | - | C1H11g03683 | C2H11g17744 | LOC_Os11g14430 | Os11g0250000 | RBS1, Rbs1 | Detail |
| CX11g013101 | 11:7,036,788-7,039,752 | - | C1H11g11130 | C2H11g30632 | LOC_Os11g14544 | Os11g0251400 | - | Detail |