| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g03508 | 5:7,583,049-7,583,942 | - | C1H5g21179 | CX5g038349 | LOC_Os05g15770 | Os05g0247100 | DIP3, XIP, OsHI-XIP | Detail |
| C2H5g09723 | 5:7,630,074-7,639,532 | - | C1H5g04227 | CX5g040966 | LOC_Os05g15890 | Os05g0247900 | OsCHR713, CHR713 | Detail |
| C2H5g16380 | 5:7,655,551-7,657,410 | - | C1H5g29560 | CX5g038055 | LOC_Os05g16000 | Os05g0249800 | - | Detail |
| C2H5g23841 | 5:7,670,803-7,671,060 | - | C1H5g10784 | CX5g038858 | LOC_Os05g16054 | Os05g0249100 | - | Detail |
| C2H5g02175 | 5:7,695,276-7,697,536 | - | C1H5g29560 | CX5g039101 | LOC_Os05g16100 | Os05g0249800 | - | Detail |
| C2H5g15350 | 5:7,707,412-7,710,911 | - | C1H5g23916 | CX5g039101 | LOC_Os05g16140 | Os05g0250000 | - | Detail |
| C2H5g06835 | 5:7,715,435-7,719,297 | - | C1H5g17383 | CX5g039101 | LOC_Os05g16240 | Os05g0250200 | - | Detail |
| C2H5g11862 | 5:7,723,279-7,726,185 | - | C1H5g19855 | CX5g041055 | LOC_Os05g16200 | Os05g0250700 | - | Detail |
| C2H5g27100 | 5:7,736,709-7,737,431 | - | - | - | - | - | - | Detail |
| C2H5g08541 | 5:7,756,996-7,758,426 | - | - | CX5g041082 | - | - | - | Detail |
| C2H5g10190 | 5:7,761,947-7,765,438 | - | C1H5g18798 | CX5g038245 | LOC_Os05g16200 | Os05g0250700 | - | Detail |
| C2H5g00039 | 5:7,788,239-7,791,656 | - | C1H5g13669 | - | - | - | - | Detail |
| C2H5g10863 | 5:7,791,689-7,792,726 | - | C1H5g13669 | CX5g039794 | LOC_Os05g16230 | Os05g0251200 | - | Detail |
| C2H5g12394 | 5:7,796,358-7,797,614 | - | C1H5g11478 | CX5g039447 | LOC_Os05g16240 | Os05g0251200 | - | Detail |
| C2H5g03213 | 5:7,799,407-7,803,760 | + | C1H5g13415 | CX5g038303 | LOC_Os05g16250 | Os05g0251400 | OsBVF1, P31<sup>comet</sup> | Detail |
| C2H5g18069 | 5:7,804,814-7,808,658 | + | C1H5g25482 | CX5g038303 | - | Os05g0251500 | - | Detail |
| C2H5g11253 | 5:7,812,460-7,816,343 | + | C1H5g22880 | CX5g037603 | - | - | - | Detail |
| C2H5g17103 | 5:7,813,545-7,819,371 | - | C1H5g03577 | CX5g040268 | LOC_Os05g16280 | Os05g0251900 | - | Detail |
| C2H5g24772 | 5:7,822,367-7,827,353 | - | C1H5g13508 | CX5g041044 | LOC_Os05g16290 | Os05g0252000 | - | Detail |
| C2H5g01822 | 5:7,838,754-7,840,413 | - | C1H5g26814 | CX5g037929 | LOC_Os05g16300 | Os05g0252100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g011338 | 11:6,609,474-6,610,421 | - | C1H11g04130 | C2H11g26976 | LOC_Os11g13870 | Os11g0242600 | - | Detail |
| CX11g012360 | 11:6,613,598-6,616,971 | + | C1H11g00798 | C2H11g21556 | LOC_Os11g13880 | Os11g0242700 | - | Detail |
| CX11g013620 | 11:6,617,870-6,620,024 | + | C1H11g18756 | C2H11g16617 | LOC_Os11g13890 | Os11g0242800 | LHCB5 | Detail |
| CX11g012343 | 11:6,638,112-6,639,338 | - | C1H11g23539 | C2H11g07210 | LOC_Os11g13930 | Os11g0243300 | - | Detail |
| CX11g012090 | 11:6,652,297-6,652,461 | - | - | - | LOC_Os11g13934 | Os11g0243600 | - | Detail |
| CX11g014485 | 11:6,655,586-6,658,597 | - | C1H11g20957 | C2H11g26104 | LOC_Os11g13940 | Os11g0676200 | - | Detail |
| CX11g012355 | 11:6,660,200-6,660,415 | + | - | - | - | - | - | Detail |
| CX11g013412 | 11:6,698,781-6,699,799 | + | - | - | - | - | - | Detail |
| CX11g013552 | 11:6,701,390-6,701,569 | + | - | - | - | Os07g0137500 | - | Detail |
| CX11g013774 | 11:6,702,738-6,702,914 | + | - | - | - | Os02g0188201 | - | Detail |
| CX11g014048 | 11:6,707,844-6,708,113 | - | - | - | - | - | - | Detail |
| CX11g012230 | 11:6,712,047-6,713,507 | - | C1H11g00635 | C2H11g07080 | LOC_Os11g13970 | Os11g0244100 | - | Detail |
| CX11g013197 | 11:6,716,623-6,717,258 | - | C1H11g21033 | C2H11g07080 | LOC_Os11g13980 | Os11g0244200 | - | Detail |
| CX11g014379 | 11:6,719,466-6,726,067 | - | C1H11g12260 | C2H11g17324 | LOC_Os11g13990 | Os11g0244300 | - | Detail |
| CX11g013437 | 11:6,732,139-6,733,371 | - | C1H11g04021 | C2H11g17507 | LOC_Os11g14000 | Os11g0244600 | - | Detail |
| CX11g011026 | 11:6,737,695-6,745,077 | - | C1H11g19482 | C2H11g05464 | LOC_Os11g14010 | Os11g0244800 | OsAL11 | Detail |
| CX11g015026 | 11:6,749,100-6,750,950 | - | C1H11g13582 | C2H11g09302 | LOC_Os11g14020 | Os11g0244900 | - | Detail |
| CX11g013756 | 11:6,752,729-6,754,991 | + | C1H11g11117 | C2H11g20255 | LOC_Os11g14040 | Os11g0245100 | OsGSTZ4 | Detail |
| CX11g012888 | 11:6,760,493-6,765,806 | + | C1H11g29483 | C2H11g28082 | LOC_Os11g14050 | Os11g0245200 | - | Detail |
| CX11g013256 | 11:6,778,892-6,779,224 | + | - | - | - | - | - | Detail |