| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g21818 | 8:21,278,483-21,280,492 | + | C1H8g00918 | CX8g052900 | LOC_Os08g39630 | Os08g0506700 | OsFBH1, POH1 | Detail |
| C2H8g10072 | 8:21,295,505-21,297,031 | + | C1H8g02946 | CX8g053330 | LOC_Os08g39694 | Os08g0507000 | - | Detail |
| C2H8g30284 | 8:21,313,645-21,315,171 | + | C1H8g02946 | CX8g052494 | LOC_Os08g39730 | Os08g0508000 | CYP76C6 | Detail |
| C2H8g26138 | 8:21,322,863-21,324,395 | + | C1H8g02946 | CX8g053518 | LOC_Os08g39730 | Os08g0508000 | CYP76C6 | Detail |
| C2H8g03218 | 8:21,324,619-21,327,496 | - | C1H8g28706 | CX8g053499 | LOC_Os08g39740 | Os08g0508100 | - | Detail |
| C2H8g14917 | 8:21,336,534-21,341,315 | - | C1H8g26764 | CX8g054344 | LOC_Os08g39810 | Os08g0508500 | - | Detail |
| C2H8g11766 | 8:21,345,280-21,347,819 | + | C1H8g11318 | CX8g053265 | LOC_Os08g39820 | Os08g0508600 | - | Detail |
| C2H8g22017 | 8:21,350,208-21,352,058 | + | C1H8g03168 | CX8g054476 | LOC_Os08g39830 | Os08g0508700 | - | Detail |
| C2H8g14861 | 8:21,355,672-21,360,638 | - | C1H8g18312 | CX8g054768 | LOC_Os08g39840 | Os08g0508800 | OsHI-LOX | Detail |
| C2H8g19828 | 8:21,373,139-21,381,558 | + | C1H8g17933 | CX8g050519 | LOC_Os08g39840 | Os08g0509100 | - | Detail |
| C2H8g21670 | 8:21,381,741-21,386,155 | - | C1H8g19400 | CX8g053424 | LOC_Os08g39860 | Os08g0509200 | - | Detail |
| C2H8g14320 | 8:21,395,983-21,401,382 | - | C1H8g14217 | CX8g050462 | LOC_Os08g39870 | Os08g0509400 | - | Detail |
| C2H8g18791 | 8:21,402,713-21,405,780 | + | C1H8g31122 | CX8g052395 | LOC_Os08g39880 | Os08g0509500 | - | Detail |
| C2H8g07989 | 8:21,407,747-21,408,052 | - | C1H8g04991 | CX8g052375 | LOC_Os08g39890 | Os08g0509600 | WFP, OsSPL14, SPL14, IPA1, WFP/IPA1 | Detail |
| C2H8g28923 | 8:21,408,776-21,411,165 | - | C1H8g04991 | CX8g052375 | LOC_Os08g39890 | Os08g0509600 | WFP, OsSPL14, SPL14, IPA1, WFP/IPA1 | Detail |
| C2H8g28069 | 8:21,431,029-21,431,957 | - | C1H8g16265 | CX8g051662 | LOC_Os08g39940 | Os08g0510101 | - | Detail |
| C2H8g16182 | 8:21,432,150-21,432,624 | - | C1H8g23320 | CX8g051662 | LOC_Os08g39940 | Os08g0510101 | - | Detail |
| C2H8g05100 | 8:21,434,040-21,438,479 | + | C1H8g13339 | CX8g051410 | LOC_Os08g39950 | Os08g0510300 | OsHAK26 | Detail |
| C2H8g30189 | 8:21,438,689-21,441,258 | - | C1H8g11932 | CX8g051070 | LOC_Os08g39960 | Os08g0510400 | - | Detail |
| C2H8g03377 | 8:21,442,329-21,445,614 | + | C1H8g17932 | CX8g053229 | LOC_Os08g39970 | Os08g0510500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000915 | 1:5,727,341-5,739,857 | - | C1H1g28664 | C2H1g17937 | LOC_Os01g11960 | Os01g0218900 | - | Detail |
| CX1g004702 | 1:5,752,182-5,752,928 | + | C1H1g00514 | C2H1g09244 | LOC_Os01g11970 | Os01g0219000 | - | Detail |
| CX1g003171 | 1:5,754,036-5,756,628 | + | C1H1g27900 | C2H1g22718 | LOC_Os01g11980 | Os01g0219100 | - | Detail |
| CX1g000508 | 1:5,757,439-5,760,378 | + | C1H1g26992 | C2H1g24979 | LOC_Os01g11990 | Os01g0219200 | ZYGO1 | Detail |
| CX1g003538 | 1:5,763,441-5,763,998 | + | - | C2H1g04486 | LOC_Os01g12000 | Os01g0219300 | - | Detail |
| CX1g005007 | 1:5,769,707-5,770,184 | + | C1H1g22028 | C2H1g07180 | LOC_Os01g12020 | Os01g0219500 | OsLTPL18 | Detail |
| CX1g005138 | 1:5,770,607-5,773,059 | - | C1H1g09843 | C2H1g00052 | LOC_Os01g12030 | Os01g0219600 | - | Detail |
| CX1g005599 | 1:5,786,870-5,790,114 | - | C1H1g27823 | C2H1g03412 | LOC_Os01g12070 | Os01g0220100 | OsCel9A | Detail |
| CX1g001222 | 1:5,794,302-5,800,168 | - | C1H1g03057 | C2H1g01177 | LOC_Os01g12080 | Os01g0220200 | - | Detail |
| CX1g003024 | 1:5,805,958-5,809,186 | + | C1H1g21223 | C2H1g26925 | LOC_Os01g12090 | Os01g0220300 | - | Detail |
| CX1g004887 | 1:5,814,029-5,814,775 | - | C1H1g25550 | C2H1g24521 | LOC_Os01g12110 | Os01g0220500 | - | Detail |
| CX1g004733 | 1:5,827,081-5,827,290 | - | - | - | - | - | - | Detail |
| CX1g004493 | 1:5,829,849-5,830,106 | + | C1H1g19821 | C2H1g00971 | - | - | - | Detail |
| CX1g005454 | 1:5,835,015-5,836,377 | - | C1H1g27706 | C2H1g25264 | LOC_Os01g12130 | Os01g0220700 | - | Detail |
| CX1g005696 | 1:5,840,933-5,845,836 | - | C1H1g25539 | C2H1g05073 | LOC_Os01g12160 | Os01g0221100 | - | Detail |
| CX1g003119 | 1:5,854,170-5,854,415 | - | - | - | - | - | - | Detail |
| CX1g004361 | 1:5,859,015-5,861,127 | - | C1H1g22662 | C2H1g06563 | LOC_Os01g12180 | Os01g0221300 | - | Detail |
| CX1g000729 | 1:5,865,814-5,866,059 | + | - | C2H1g28766 | LOC_Os01g12190 | Os01g0221400 | - | Detail |
| CX1g003668 | 1:5,868,776-5,870,686 | + | C1H1g19527 | C2H1g01549 | LOC_Os01g12200 | Os01g0221500 | - | Detail |
| CX1g006663 | 1:5,874,873-5,877,971 | + | C1H1g01490 | C2H1g21998 | LOC_Os01g12210 | Os01g0221600 | OsALMT4 | Detail |