| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g10005 | 2:28,207,592-28,213,840 | + | C2H2g04852 | CX2g023479 | LOC_Os02g50370 | Os02g0736600 | - | Detail |
| C1H2g07594 | 2:28,214,316-28,214,573 | - | C2H2g22765 | CX2g023200 | - | Os02g0736700 | - | Detail |
| C1H2g14249 | 2:28,227,982-28,228,206 | + | C2H2g21919 | - | LOC_Os02g50450 | Os02g0737950 | - | Detail |
| C1H2g30478 | 2:28,228,722-28,229,055 | + | - | - | - | Os02g0737950 | - | Detail |
| C1H2g00500 | 2:28,261,361-28,267,274 | + | C2H2g16308 | CX2g021204 | LOC_Os02g50480 | Os02g0738400 | OHK5, OHK5, Ohk5, OsHK1, OsHK6, HK, Crl1a | Detail |
| C1H2g09387 | 2:28,276,045-28,279,625 | + | C2H2g12754 | CX2g020936 | LOC_Os02g50490 | Os02g0738600 | - | Detail |
| C1H2g28406 | 2:28,287,671-28,297,491 | - | C2H2g25440 | CX2g022539 | LOC_Os02g50550 | Os02g0738900 | BC3, bc3, bc-3, OsDRP2B, DRP2B | Detail |
| C1H2g30401 | 2:28,297,507-28,297,704 | - | - | CX2g022539 | - | - | - | Detail |
| C1H2g06055 | 2:28,299,126-28,308,398 | + | C2H2g10338 | CX2g024755 | LOC_Os02g50560 | Os02g0739000 | - | Detail |
| C1H2g22155 | 2:28,308,325-28,312,785 | - | C2H2g19070 | CX2g024527 | LOC_Os02g50570 | Os02g0739100 | - | Detail |
| C1H2g19740 | 2:28,332,807-28,336,612 | - | C2H2g13279 | CX2g023255 | LOC_Os02g50620 | Os02g0739600 | - | Detail |
| C1H2g02446 | 2:28,338,313-28,341,142 | - | C2H2g20599 | CX2g021394 | LOC_Os02g50630 | Os02g0739700 | OsE2Fe-1 | Detail |
| C1H2g01602 | 2:28,343,991-28,348,147 | - | C2H2g22496 | CX2g023514 | LOC_Os02g50640 | Os02g0739900 | - | Detail |
| C1H2g14498 | 2:28,363,242-28,369,337 | - | C2H2g07910 | CX2g021304 | LOC_Os02g50680 | Os02g0740300 | - | Detail |
| C1H2g26149 | 2:28,370,112-28,371,544 | - | C2H2g25866 | CX2g024066 | LOC_Os02g50690 | Os02g0740400 | - | Detail |
| C1H2g27425 | 2:28,376,019-28,377,561 | + | C2H2g26692 | CX2g023069 | LOC_Os02g50700 | Os02g0740500 | - | Detail |
| C1H2g04140 | 2:28,382,759-28,385,516 | - | C2H2g23006 | CX2g024544 | LOC_Os02g50710 | Os02g0740600 | - | Detail |
| C1H2g20437 | 2:28,398,757-28,402,464 | + | C2H2g20295 | CX2g020505 | LOC_Os02g50760 | Os02g0741100 | - | Detail |
| C1H2g04090 | 2:28,407,528-28,412,353 | + | C2H2g20379 | CX2g020607 | LOC_Os02g50780 | Os02g0741300 | - | Detail |
| C1H2g03541 | 2:28,412,827-28,437,570 | - | C2H2g26992 | CX2g021407 | LOC_Os02g50790 | Os02g0741500 | OsTPR | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g012982 | 11:3,905,162-3,911,852 | + | C1H11g28039 | C2H11g19184 | LOC_Os11g08670 | Os11g0191400 | - | Detail |
| CX11g011316 | 11:3,915,914-3,916,468 | + | C1H11g05357 | C2H11g03438 | LOC_Os11g08930 | Os11g0194100 | OsPMEI41 | Detail |
| CX11g012315 | 11:3,934,772-3,935,281 | - | C1H11g07281 | C2H11g05785 | LOC_Os11g08760 | Os11g0192500 | - | Detail |
| CX11g014246 | 11:3,946,163-3,948,009 | + | C1H11g29353 | C2H11g16644 | LOC_Os11g08750 | Os11g0192400 | - | Detail |
| CX11g014240 | 11:3,953,388-3,954,053 | + | C1H11g18680 | C2H11g28044 | LOC_Os11g08820 | Os11g0193800 | - | Detail |
| CX11g014524 | 11:3,963,135-3,963,695 | - | C1H11g02352 | C2H11g03438 | LOC_Os11g08860 | Os11g0194100 | OsPMEI41 | Detail |
| CX11g013175 | 11:3,971,887-3,974,022 | + | C1H11g00706 | C2H11g17029 | LOC_Os11g08940 | Os11g0194800 | - | Detail |
| CX11g014621 | 11:3,975,467-3,978,965 | - | C1H11g10333 | C2H11g22885 | LOC_Os11g08950 | Os11g0194900 | - | Detail |
| CX11g012121 | 11:3,987,434-3,987,820 | + | C1H11g05185 | - | - | Os06g0176600 | - | Detail |
| CX11g013394 | 11:3,999,948-4,000,692 | - | C1H11g15377 | C2H11g01028 | LOC_Os11g08970 | Os11g0195000 | - | Detail |
| CX11g014274 | 11:4,001,166-4,010,214 | + | C1H11g04515 | C2H11g29460 | LOC_Os11g08980 | Os11g0195100 | - | Detail |
| CX11g013500 | 11:4,019,135-4,022,913 | + | C1H11g13314 | C2H11g04679 | LOC_Os11g09010 | Os11g0195500 | OsPAD4 | Detail |
| CX11g012441 | 11:4,033,727-4,035,357 | + | C1H11g04578 | C2H11g05780 | LOC_Os11g09020 | Os11g0195600 | OsAAP11 | Detail |
| CX11g011859 | 11:4,040,574-4,040,888 | - | C1H11g24174 | - | LOC_Os11g09030 | Os11g0195700 | - | Detail |
| CX11g014926 | 11:4,041,955-4,042,836 | - | C1H11g17396 | - | LOC_Os11g09040 | Os11g0195800 | - | Detail |
| CX11g014348 | 11:4,055,223-4,056,691 | - | C1H11g05735 | C2H11g16513 | LOC_Os11g09060 | - | - | Detail |
| CX11g012210 | 11:4,101,329-4,103,260 | + | C1H11g08094 | C2H11g06028 | LOC_Os11g09130 | Os11g0107700 | - | Detail |
| CX11g012245 | 11:4,105,570-4,109,903 | - | C1H11g09685 | C2H11g28467 | LOC_Os11g09140 | Os11g0197400 | - | Detail |
| CX11g011916 | 11:4,110,903-4,111,376 | + | C1H11g19265 | C2H11g07452 | - | Os11g0121000 | - | Detail |
| CX11g011032 | 11:4,132,876-4,133,289 | + | C1H11g03791 | - | LOC_Os11g09150 | Os11g0197500 | - | Detail |