| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g04890 | 9:19,069,124-19,073,047 | + | C2H9g17992 | CX9g056849 | LOC_Os09g39380 | Os09g0567300 | MDHAR, OsMDHAR, OsMDAR3, OsMDHAR3 | Detail |
| C1H9g13266 | 9:19,073,094-19,076,233 | + | C2H9g25680 | CX9g058049 | LOC_Os09g39390 | Os09g0567366 | - | Detail |
| C1H9g16090 | 9:19,078,531-19,081,006 | + | C2H9g00653 | CX9g056022 | LOC_Os09g39400 | Os09g0567400 | - | Detail |
| C1H9g25909 | 9:19,085,026-19,090,786 | + | C2H9g10548 | CX9g057497 | LOC_Os09g39410 | Os09g0567500 | - | Detail |
| C1H9g01897 | 9:19,091,906-19,096,902 | + | C2H9g15634 | CX9g055257 | LOC_Os09g39420 | Os09g0567700 | - | Detail |
| C1H9g27590 | 9:19,096,960-19,100,398 | - | C2H9g07527 | CX9g058075 | LOC_Os09g39430 | Os09g0567800 | - | Detail |
| C1H9g04610 | 9:19,103,896-19,106,558 | - | C2H9g28844 | CX9g058045 | LOC_Os09g39440 | Os09g0567900 | - | Detail |
| C1H9g06631 | 9:19,108,871-19,113,014 | + | C2H9g14034 | CX9g055030 | LOC_Os09g39462 | Os09g0568000 | - | Detail |
| C1H9g15019 | 9:19,113,667-19,113,891 | + | - | CX9g058185 | - | - | - | Detail |
| C1H9g18800 | 9:19,114,406-19,115,801 | + | C2H9g07303 | CX9g055723 | LOC_Os09g39474 | Os09g0568100 | - | Detail |
| C1H9g25533 | 9:19,116,932-19,117,909 | - | C2H9g14146 | CX9g055477 | LOC_Os09g39490 | Os09g0568200 | - | Detail |
| C1H9g00933 | 9:19,121,436-19,122,161 | - | - | CX9g056373 | LOC_Os09g39510 | Os09g0568500 | - | Detail |
| C1H9g05388 | 9:19,125,266-19,125,907 | - | - | CX9g056956 | LOC_Os09g39520 | Os09g0568600 | - | Detail |
| C1H9g08565 | 9:19,127,695-19,128,339 | - | - | CX9g057185 | LOC_Os09g39530 | Os09g0568700 | - | Detail |
| C1H9g27100 | 9:19,129,439-19,130,916 | - | C2H9g28333 | CX9g057377 | LOC_Os09g39540 | Os09g0568800 | - | Detail |
| C1H9g30656 | 9:19,131,188-19,133,085 | + | C2H9g03364 | CX9g055404 | LOC_Os09g39550 | Os09g0568900 | IF1-2, IF<sub>1</sub>-2 | Detail |
| C1H9g22287 | 9:19,134,907-19,136,848 | + | C2H9g03868 | CX9g057720 | LOC_Os09g39560 | Os09g0569100 | - | Detail |
| C1H9g23985 | 9:19,140,226-19,140,612 | + | C2H9g00291 | CX9g057873 | - | - | - | Detail |
| C1H9g14979 | 9:19,141,650-19,145,064 | + | C2H9g00291 | CX9g057873 | LOC_Os09g39570 | Os09g0569200 | - | Detail |
| C1H9g21337 | 9:19,145,011-19,148,481 | - | C2H9g21708 | CX9g056948 | LOC_Os09g39580 | Os09g0569300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g012982 | 11:3,905,162-3,911,852 | + | C1H11g28039 | C2H11g19184 | LOC_Os11g08670 | Os11g0191400 | - | Detail |
| CX11g011316 | 11:3,915,914-3,916,468 | + | C1H11g05357 | C2H11g03438 | LOC_Os11g08930 | Os11g0194100 | OsPMEI41 | Detail |
| CX11g012315 | 11:3,934,772-3,935,281 | - | C1H11g07281 | C2H11g05785 | LOC_Os11g08760 | Os11g0192500 | - | Detail |
| CX11g014246 | 11:3,946,163-3,948,009 | + | C1H11g29353 | C2H11g16644 | LOC_Os11g08750 | Os11g0192400 | - | Detail |
| CX11g014240 | 11:3,953,388-3,954,053 | + | C1H11g18680 | C2H11g28044 | LOC_Os11g08820 | Os11g0193800 | - | Detail |
| CX11g014524 | 11:3,963,135-3,963,695 | - | C1H11g02352 | C2H11g03438 | LOC_Os11g08860 | Os11g0194100 | OsPMEI41 | Detail |
| CX11g013175 | 11:3,971,887-3,974,022 | + | C1H11g00706 | C2H11g17029 | LOC_Os11g08940 | Os11g0194800 | - | Detail |
| CX11g014621 | 11:3,975,467-3,978,965 | - | C1H11g10333 | C2H11g22885 | LOC_Os11g08950 | Os11g0194900 | - | Detail |
| CX11g012121 | 11:3,987,434-3,987,820 | + | C1H11g05185 | - | - | Os06g0176600 | - | Detail |
| CX11g013394 | 11:3,999,948-4,000,692 | - | C1H11g15377 | C2H11g01028 | LOC_Os11g08970 | Os11g0195000 | - | Detail |
| CX11g014274 | 11:4,001,166-4,010,214 | + | C1H11g04515 | C2H11g29460 | LOC_Os11g08980 | Os11g0195100 | - | Detail |
| CX11g013500 | 11:4,019,135-4,022,913 | + | C1H11g13314 | C2H11g04679 | LOC_Os11g09010 | Os11g0195500 | OsPAD4 | Detail |
| CX11g012441 | 11:4,033,727-4,035,357 | + | C1H11g04578 | C2H11g05780 | LOC_Os11g09020 | Os11g0195600 | OsAAP11 | Detail |
| CX11g011859 | 11:4,040,574-4,040,888 | - | C1H11g24174 | - | LOC_Os11g09030 | Os11g0195700 | - | Detail |
| CX11g014926 | 11:4,041,955-4,042,836 | - | C1H11g17396 | - | LOC_Os11g09040 | Os11g0195800 | - | Detail |
| CX11g014348 | 11:4,055,223-4,056,691 | - | C1H11g05735 | C2H11g16513 | LOC_Os11g09060 | - | - | Detail |
| CX11g012210 | 11:4,101,329-4,103,260 | + | C1H11g08094 | C2H11g06028 | LOC_Os11g09130 | Os11g0107700 | - | Detail |
| CX11g012245 | 11:4,105,570-4,109,903 | - | C1H11g09685 | C2H11g28467 | LOC_Os11g09140 | Os11g0197400 | - | Detail |
| CX11g011916 | 11:4,110,903-4,111,376 | + | C1H11g19265 | C2H11g07452 | - | Os11g0121000 | - | Detail |
| CX11g011032 | 11:4,132,876-4,133,289 | + | C1H11g03791 | - | LOC_Os11g09150 | Os11g0197500 | - | Detail |