| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g01230 | 3:10,307,365-10,308,510 | + | C1H3g19861 | CX3g029583 | LOC_Os03g20500 | Os03g0321300 | - | Detail |
| C2H3g17781 | 3:10,308,593-10,308,889 | - | C1H3g31579 | - | - | - | - | Detail |
| C2H3g10177 | 3:10,316,260-10,322,166 | - | C1H3g05314 | CX3g030418 | LOC_Os03g20520 | Os03g0321400 | - | Detail |
| C2H3g16949 | 3:10,324,466-10,330,856 | - | C1H3g24166 | CX3g027287 | LOC_Os03g20530 | Os03g0321500 | OsBBP1 | Detail |
| C2H3g07472 | 3:10,345,050-10,346,093 | + | C1H3g22188 | CX3g030570 | LOC_Os03g20550 | Os03g0321700 | OsWRKY31, OsWRKY55 | Detail |
| C2H3g22893 | 3:10,347,237-10,347,962 | - | C1H3g31320 | CX3g029278 | LOC_Os03g20560 | Os03g0321800 | - | Detail |
| C2H3g22031 | 3:10,348,238-10,349,180 | + | C1H3g15973 | CX3g025622 | LOC_Os03g20570 | Os03g0321900 | - | Detail |
| C2H3g29406 | 3:10,351,022-10,357,302 | - | C1H3g10139 | CX3g027052 | LOC_Os03g20580 | Os03g0322000 | - | Detail |
| C2H3g13047 | 3:10,357,687-10,358,181 | + | C1H3g01616 | CX3g026700 | LOC_Os03g20590 | - | - | Detail |
| C2H3g25454 | 3:10,358,614-10,358,970 | - | C1H3g09864 | CX3g029175 | LOC_Os03g20600 | Os03g0322200 | - | Detail |
| C2H3g26982 | 3:10,361,368-10,365,986 | + | C1H3g20781 | CX3g026757 | LOC_Os03g20630 | Os03g0322500 | - | Detail |
| C2H3g00494 | 3:10,366,789-10,369,051 | + | C1H3g30541 | CX3g029187 | LOC_Os03g20640 | Os03g0322600 | - | Detail |
| C2H3g22567 | 3:10,369,392-10,372,866 | - | C1H3g17698 | CX3g029676 | LOC_Os03g20650 | Os03g0322700 | - | Detail |
| C2H3g08879 | 3:10,386,065-10,390,118 | + | C1H3g30170 | CX3g029908 | LOC_Os03g20670 | Os03g0322800 | - | Detail |
| C2H3g26182 | 3:10,391,164-10,392,277 | - | C1H3g03964 | CX3g027559 | LOC_Os03g20680 | Os03g0322900 | LEA17, OsLEA17, OsLEA3-2, LEA3-2 | Detail |
| C2H3g25815 | 3:10,397,789-10,403,134 | + | - | CX3g027985 | LOC_Os03g20700 | Os03g0323200 | OsCHLH | Detail |
| C2H3g04983 | 3:10,407,133-10,412,570 | + | C1H3g04844 | CX3g028829 | LOC_Os03g20720 | Os03g0323500 | - | Detail |
| C2H3g18862 | 3:10,413,313-10,413,825 | - | C1H3g01461 | CX3g028214 | LOC_Os03g20730 | Os03g0323600 | - | Detail |
| C2H3g17326 | 3:10,422,832-10,428,321 | + | C1H3g26967 | CX3g025044 | LOC_Os03g20750 | Os03g0323800 | OsVDAC8 | Detail |
| C2H3g13354 | 3:10,433,039-10,434,380 | + | C1H3g06354 | CX3g030983 | LOC_Os03g20760 | Os03g0323900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g012890 | 11:3,675,229-3,685,180 | - | C1H11g17958 | C2H11g08181 | LOC_Os11g08330 | Os11g0186400 | OsPolδ1 | Detail |
| CX11g011992 | 11:3,690,387-3,690,874 | - | C1H11g07924 | C2H11g08701 | - | - | - | Detail |
| CX11g012905 | 11:3,695,258-3,697,254 | + | C1H11g02795 | C2H11g25550 | LOC_Os11g08340 | Os11g0186500 | - | Detail |
| CX11g013601 | 11:3,701,398-3,701,950 | - | C1H11g07164 | - | LOC_Os11g08350 | Os11g0186600 | - | Detail |
| CX11g013529 | 11:3,708,616-3,711,886 | - | - | C2H11g17985 | LOC_Os10g30240 | - | - | Detail |
| CX11g010865 | 11:3,714,732-3,716,021 | + | C1H11g17459 | C2H12g10711 | LOC_Os11g08370 | Os11g0186800 | OsPHT4;6-1 | Detail |
| CX11g011016 | 11:3,716,733-3,718,686 | - | C1H11g14026 | C2H11g02033 | LOC_Os11g08380 | Os11g0186900 | ACO4, OsACO4 | Detail |
| CX11g014704 | 11:3,726,423-3,729,565 | - | C1H11g22592 | C2H11g27753 | LOC_Os11g08400 | Os11g0187100 | - | Detail |
| CX11g014014 | 11:3,731,091-3,732,395 | - | C1H11g22066 | - | LOC_Os11g08410 | Os11g0187200 | OsGATA28 | Detail |
| CX11g012608 | 11:3,738,700-3,739,353 | + | C1H11g07164 | - | LOC_Os11g08350 | Os11g0186600 | - | Detail |
| CX11g013260 | 11:3,743,934-3,746,768 | + | C1H11g23754 | C2H11g00409 | LOC_Os11g08440 | Os11g0187500 | - | Detail |
| CX11g010895 | 11:3,749,444-3,754,645 | + | C1H11g23413 | C2H11g20573 | LOC_Os11g08445 | Os11g0187500 | - | Detail |
| CX11g010954 | 11:3,765,181-3,768,298 | - | C1H11g12403 | C2H11g21129 | LOC_Os11g08460 | Os11g0187600 | - | Detail |
| CX11g014509 | 11:3,776,605-3,779,451 | - | C1H11g23413 | C2H11g20573 | LOC_Os11g08470 | Os11g0187500 | - | Detail |
| CX11g011469 | 11:3,807,602-3,815,323 | + | C1H11g23968 | C2H11g14619 | LOC_Os11g08569 | Os11g0189600 | - | Detail |
| CX11g011543 | 11:3,860,924-3,861,259 | + | - | - | - | - | - | Detail |
| CX11g013966 | 11:3,866,187-3,866,567 | + | - | - | - | - | - | Detail |
| CX11g011618 | 11:3,867,797-3,868,033 | - | - | - | - | Os07g0464001 | - | Detail |
| CX11g011671 | 11:3,894,188-3,902,693 | + | C1H11g25835 | C2H11g29669 | LOC_Os11g08660 | Os11g0191300 | - | Detail |
| CX11g012764 | 11:3,904,753-3,904,932 | - | - | - | - | - | - | Detail |