| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g14699 | 12:4,298,988-4,301,829 | + | C2H12g20905 | CX12g016700 | LOC_Os12g09280 | Os12g0194700 | - | Detail |
| C1H12g12430 | 12:4,303,190-4,307,539 | - | C2H12g24786 | CX12g018743 | LOC_Os12g09250 | Os12g0194600 | - | Detail |
| C1H12g18185 | 12:4,329,039-4,329,708 | - | C2H12g06870 | - | - | Os12g0194266 | - | Detail |
| C1H12g08170 | 12:4,332,841-4,336,075 | - | C2H12g12025 | CX12g017165 | LOC_Os12g09190 | Os12g0193800 | - | Detail |
| C1H12g29621 | 12:4,336,328-4,348,865 | + | C2H12g14586 | CX12g015349 | LOC_Os12g09120 | Os12g0193200 | - | Detail |
| C1H12g21517 | 12:4,351,247-4,356,181 | + | C2H12g11874 | CX12g018612 | LOC_Os12g09089 | Os12g0193100 | - | Detail |
| C1H12g09926 | 12:4,364,336-4,365,463 | - | C2H12g23949 | CX12g018030 | LOC_Os12g09080 | Os12g0193000 | OsBRXL6, OsBRXL5 | Detail |
| C1H12g09634 | 12:4,425,833-4,429,783 | - | C2H12g27593 | CX12g016281 | LOC_Os12g09540 | Os12g0197100 | - | Detail |
| C1H12g03068 | 12:4,442,428-4,446,171 | + | C2H12g30512 | CX12g017856 | LOC_Os12g09570 | Os12g0197400 | - | Detail |
| C1H12g20394 | 12:4,446,904-4,452,237 | - | C2H12g12604 | CX12g017219 | LOC_Os12g09580 | Os12g0197500 | - | Detail |
| C1H12g19823 | 12:4,453,742-4,458,996 | - | C2H12g18171 | CX12g018792 | LOC_Os12g09590 | Os12g0197700 | OsSGS3b | Detail |
| C1H12g03605 | 12:4,472,758-4,481,696 | + | C2H12g18707 | CX12g016062 | LOC_Os12g09610 | Os12g0197900 | - | Detail |
| C1H12g29042 | 12:4,486,367-4,491,123 | - | C2H12g07996 | CX12g017038 | LOC_Os12g09640 | Os12g0198200 | - | Detail |
| C1H12g30959 | 12:4,511,630-4,512,232 | - | C2H12g09280 | CX12g018011 | LOC_Os12g09670 | Os12g0198500 | - | Detail |
| C1H12g00057 | 12:4,515,536-4,516,174 | - | C2H12g16031 | CX12g018011 | - | - | - | Detail |
| C1H12g21936 | 12:4,528,082-4,529,507 | - | C2H12g13338 | CX12g015241 | LOC_Os12g09700 | Os12g0198700 | - | Detail |
| C1H12g18620 | 12:4,537,245-4,540,933 | + | C2H12g07984 | CX12g018163 | LOC_Os12g09710 | Os12g0198900 | - | Detail |
| C1H12g20422 | 12:4,543,013-4,545,970 | - | C2H12g13398 | CX12g016268 | LOC_Os12g09700 | Os12g0198700 | - | Detail |
| C1H12g03660 | 12:4,552,283-4,562,356 | - | C2H12g09085 | CX12g016763 | LOC_Os12g10460 | Os12g0199100 | - | Detail |
| C1H12g18718 | 12:4,582,166-4,585,812 | + | C2H12g25382 | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g013186 | 11:3,418,058-3,423,261 | + | C1H11g17230 | C2H11g17623 | LOC_Os11g07930 | Os11g0181800 | - | Detail |
| CX11g012112 | 11:3,433,641-3,434,327 | - | C1H11g12035 | - | LOC_Os11g07950 | Os11g0182100 | - | Detail |
| CX11g013059 | 11:3,441,131-3,442,907 | - | C1H11g08570 | C2H11g19148 | LOC_Os11g07960 | Os11g0182200 | - | Detail |
| CX11g014550 | 11:3,450,116-3,455,758 | - | C1H11g21787 | C2H11g25418 | LOC_Os11g07970 | Os11g0182400 | - | Detail |
| CX11g015003 | 11:3,458,997-3,465,006 | - | C1H11g23072 | C2H11g13311 | LOC_Os11g07980 | Os11g0182500 | - | Detail |
| CX11g012132 | 11:3,479,516-3,484,950 | - | C1H11g20284 | C2H11g05426 | LOC_Os11g08020 | Os11g0182900 | - | Detail |
| CX11g013040 | 11:3,508,509-3,516,421 | + | C1H11g05910 | C2H11g12955 | LOC_Os11g08080 | Os11g0183700 | - | Detail |
| CX11g014081 | 11:3,524,050-3,524,301 | - | - | - | - | - | - | Detail |
| CX11g011589 | 11:3,524,848-3,532,657 | + | C1H11g28564 | C2H11g12360 | LOC_Os11g08090 | Os11g0183800 | - | Detail |
| CX11g013622 | 11:3,542,358-3,542,540 | - | - | - | - | - | - | Detail |
| CX11g014294 | 11:3,545,541-3,545,774 | - | - | - | - | - | - | Detail |
| CX11g012844 | 11:3,555,704-3,555,952 | - | - | - | - | Os11g0184350 | - | Detail |
| CX11g013912 | 11:3,584,679-3,586,301 | - | C1H11g09597 | C2H11g02712 | LOC_Os11g08210 | Os11g0184900 | NAC5, OsNAC5, NAC71, ONAC071, ONAC009, ONAC9, ONAC020, ONAC20, OnNAC5*, OnNAC5, OsNAC5/ONAC009 | Detail |
| CX11g014413 | 11:3,596,802-3,597,760 | + | C1H11g06049 | C2H11g30229 | LOC_Os11g08220 | Os11g0185100 | - | Detail |
| CX11g010990 | 11:3,598,762-3,599,073 | + | C1H11g16668 | C2H11g30229 | LOC_Os11g08220 | Os11g0185100 | - | Detail |
| CX11g012457 | 11:3,620,370-3,621,071 | - | - | - | - | - | - | Detail |
| CX11g012840 | 11:3,628,106-3,628,438 | + | - | C2H11g01841 | LOC_Os11g08060 | - | - | Detail |
| CX11g013131 | 11:3,663,194-3,667,542 | + | C1H11g22894 | C2H11g18389 | LOC_Os11g08300 | Os11g0186200 | - | Detail |
| CX11g014402 | 11:3,669,005-3,671,133 | + | C1H11g28283 | C2H11g28689 | LOC_Os11g08314 | Os11g0186300 | - | Detail |
| CX11g011762 | 11:3,673,232-3,674,566 | + | C1H11g04327 | C2H11g07463 | LOC_Os11g08314 | Os11g0186300 | - | Detail |