| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g22368 | 12:1,028,749-1,031,754 | + | C2H12g30295 | CX12g017662 | LOC_Os12g02980 | Os12g0123500 | OsAPY9 | Detail |
| C1H12g05221 | 12:1,035,004-1,040,764 | + | C2H12g23996 | CX12g017662 | LOC_Os12g02980 | Os12g0123500 | OsAPY9 | Detail |
| C1H12g25659 | 12:1,058,143-1,059,669 | + | C2H12g09367 | CX12g016621 | LOC_Os12g03040 | Os12g0123700 | NAC131, ONAC131 | Detail |
| C1H12g22976 | 12:1,083,130-1,087,111 | - | C2H12g07694 | CX12g015401 | LOC_Os12g03060 | Os12g0123900 | - | Detail |
| C1H12g25682 | 12:1,088,173-1,089,447 | + | C2H11g13818 | CX12g017754 | LOC_Os12g03070 | Os12g0124000 | - | Detail |
| C1H12g19027 | 12:1,096,395-1,099,481 | - | C2H12g12920 | CX12g015071 | LOC_Os12g03100 | Os12g0124400 | - | Detail |
| C1H12g21501 | 12:1,123,964-1,124,993 | - | C2H12g28075 | CX12g017678 | LOC_Os12g03150 | Os12g0125000 | OsMYB60 | Detail |
| C1H12g26200 | 12:1,135,004-1,135,948 | - | C2H12g12728 | CX12g016071 | LOC_Os12g03180 | Os12g0125300 | - | Detail |
| C1H12g16810 | 12:1,136,434-1,139,886 | - | C2H12g04503 | CX12g016045 | LOC_Os12g03190 | Os12g0125400 | - | Detail |
| C1H12g02357 | 12:1,140,404-1,145,638 | - | C2H12g11583 | CX12g016734 | LOC_Os12g03200 | Os12g0125800 | - | Detail |
| C1H12g15575 | 12:1,149,772-1,151,284 | - | C2H12g17589 | CX12g016478 | LOC_Os12g03260 | Os12g0126000 | - | Detail |
| C1H12g11610 | 12:1,160,761-1,165,060 | - | C2H12g07942 | CX12g015633 | LOC_Os12g03260 | Os12g0126000 | - | Detail |
| C1H12g08527 | 12:1,172,058-1,172,980 | - | C2H12g24280 | CX12g016190 | LOC_Os11g03520 | Os12g0126100 | OsGELP115 | Detail |
| C1H12g20982 | 12:1,173,981-1,176,323 | + | C2H12g24293 | CX12g016754 | LOC_Os12g03270 | Os12g0126200 | - | Detail |
| C1H12g18779 | 12:1,177,125-1,181,632 | - | C2H12g23067 | CX12g016808 | LOC_Os12g03290 | Os12g0126300 | OsWRI1-2 | Detail |
| C1H12g15178 | 12:1,184,769-1,187,985 | - | C2H11g10212 | CX12g016429 | LOC_Os12g03320 | Os11g0129800 | - | Detail |
| C1H12g22481 | 12:1,195,103-1,203,372 | - | C2H12g22101 | CX12g017029 | LOC_Os12g03340 | Os12g0126800 | - | Detail |
| C1H12g17482 | 12:1,204,631-1,205,526 | - | C2H12g00758 | CX12g017256 | LOC_Os12g03350 | Os11g0130200 | - | Detail |
| C1H12g09048 | 12:1,206,742-1,208,484 | + | C2H12g11621 | CX12g018353 | LOC_Os12g03360 | Os12g0127100 | - | Detail |
| C1H12g09150 | 12:1,217,148-1,218,644 | - | C2H12g17222 | CX11g011497 | LOC_Os12g03390 | Os12g0127400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g013186 | 11:3,418,058-3,423,261 | + | C1H11g17230 | C2H11g17623 | LOC_Os11g07930 | Os11g0181800 | - | Detail |
| CX11g012112 | 11:3,433,641-3,434,327 | - | C1H11g12035 | - | LOC_Os11g07950 | Os11g0182100 | - | Detail |
| CX11g013059 | 11:3,441,131-3,442,907 | - | C1H11g08570 | C2H11g19148 | LOC_Os11g07960 | Os11g0182200 | - | Detail |
| CX11g014550 | 11:3,450,116-3,455,758 | - | C1H11g21787 | C2H11g25418 | LOC_Os11g07970 | Os11g0182400 | - | Detail |
| CX11g015003 | 11:3,458,997-3,465,006 | - | C1H11g23072 | C2H11g13311 | LOC_Os11g07980 | Os11g0182500 | - | Detail |
| CX11g012132 | 11:3,479,516-3,484,950 | - | C1H11g20284 | C2H11g05426 | LOC_Os11g08020 | Os11g0182900 | - | Detail |
| CX11g013040 | 11:3,508,509-3,516,421 | + | C1H11g05910 | C2H11g12955 | LOC_Os11g08080 | Os11g0183700 | - | Detail |
| CX11g014081 | 11:3,524,050-3,524,301 | - | - | - | - | - | - | Detail |
| CX11g011589 | 11:3,524,848-3,532,657 | + | C1H11g28564 | C2H11g12360 | LOC_Os11g08090 | Os11g0183800 | - | Detail |
| CX11g013622 | 11:3,542,358-3,542,540 | - | - | - | - | - | - | Detail |
| CX11g014294 | 11:3,545,541-3,545,774 | - | - | - | - | - | - | Detail |
| CX11g012844 | 11:3,555,704-3,555,952 | - | - | - | - | Os11g0184350 | - | Detail |
| CX11g013912 | 11:3,584,679-3,586,301 | - | C1H11g09597 | C2H11g02712 | LOC_Os11g08210 | Os11g0184900 | NAC5, OsNAC5, NAC71, ONAC071, ONAC009, ONAC9, ONAC020, ONAC20, OnNAC5*, OnNAC5, OsNAC5/ONAC009 | Detail |
| CX11g014413 | 11:3,596,802-3,597,760 | + | C1H11g06049 | C2H11g30229 | LOC_Os11g08220 | Os11g0185100 | - | Detail |
| CX11g010990 | 11:3,598,762-3,599,073 | + | C1H11g16668 | C2H11g30229 | LOC_Os11g08220 | Os11g0185100 | - | Detail |
| CX11g012457 | 11:3,620,370-3,621,071 | - | - | - | - | - | - | Detail |
| CX11g012840 | 11:3,628,106-3,628,438 | + | - | C2H11g01841 | LOC_Os11g08060 | - | - | Detail |
| CX11g013131 | 11:3,663,194-3,667,542 | + | C1H11g22894 | C2H11g18389 | LOC_Os11g08300 | Os11g0186200 | - | Detail |
| CX11g014402 | 11:3,669,005-3,671,133 | + | C1H11g28283 | C2H11g28689 | LOC_Os11g08314 | Os11g0186300 | - | Detail |
| CX11g011762 | 11:3,673,232-3,674,566 | + | C1H11g04327 | C2H11g07463 | LOC_Os11g08314 | Os11g0186300 | - | Detail |