| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g04057 | 4:21,743,110-21,744,310 | - | C2H4g25390 | CX4g031891 | LOC_Os04g42134 | Os04g0499200 | - | Detail |
| C1H4g00134 | 4:21,745,544-21,751,632 | - | C2H4g20172 | CX4g035111 | LOC_Os04g42140 | Os04g0499300 | RYMV1 | Detail |
| C1H4g24364 | 4:21,776,225-21,777,834 | + | C2H4g02845 | CX4g035561 | LOC_Os04g42160 | - | - | Detail |
| C1H4g04561 | 4:21,781,312-21,782,073 | - | C2H4g09516 | CX4g035616 | LOC_Os04g42200 | Os04g0500200 | - | Detail |
| C1H4g07100 | 4:21,782,950-21,783,623 | + | C2H4g21155 | CX4g034798 | LOC_Os04g42210 | Os04g0500300 | - | Detail |
| C1H4g19980 | 4:21,785,750-21,786,476 | + | C2H4g14569 | CX4g032419 | LOC_Os04g42220 | Os04g0500400 | - | Detail |
| C1H4g27904 | 4:21,798,165-21,803,858 | + | C2H4g14624 | CX4g033698 | LOC_Os04g42250 | Os04g0500700 | - | Detail |
| C1H4g03919 | 4:21,807,927-21,810,997 | + | C2H4g24343 | CX4g034952 | LOC_Os04g42260 | Os04g0500900 | - | Detail |
| C1H4g10006 | 4:21,812,568-21,814,450 | - | C2H4g19796 | CX4g034970 | LOC_Os04g42270 | Os04g0501000 | - | Detail |
| C1H4g23951 | 4:21,815,145-21,818,488 | + | C2H4g05530 | CX4g033035 | LOC_Os04g42280 | Os04g0501100 | - | Detail |
| C1H4g25280 | 4:21,820,409-21,823,671 | + | C2H4g16771 | CX4g036023 | LOC_Os04g42290 | Os04g0501200 | - | Detail |
| C1H4g15554 | 4:21,847,646-21,854,602 | - | C2H4g27535 | CX4g035234 | LOC_Os04g42320 | Os04g0501600 | - | Detail |
| C1H4g01323 | 4:21,859,782-21,865,956 | + | C2H4g15764 | CX4g034189 | LOC_Os04g42330 | Os04g0501700 | - | Detail |
| C1H4g00716 | 4:21,869,085-21,871,132 | + | C2H4g27962 | CX4g032700 | LOC_Os04g42340 | Os04g0501800 | - | Detail |
| C1H4g29745 | 4:21,876,784-21,879,214 | + | C2H4g27570 | CX4g034230 | LOC_Os04g42360 | Os04g0502100 | - | Detail |
| C1H4g31377 | 4:21,879,842-21,887,578 | + | C2H4g20801 | CX4g031888 | LOC_Os04g42370 | Os04g0502200 | - | Detail |
| C1H4g24462 | 4:21,890,487-21,892,370 | - | C2H4g21349 | CX4g036274 | LOC_Os04g42380 | Os04g0502300 | - | Detail |
| C1H4g11983 | 4:21,902,584-21,907,590 | + | C2H4g30598 | CX4g032715 | LOC_Os04g42420 | Os04g0502800 | - | Detail |
| C1H4g13189 | 4:21,911,459-21,911,986 | - | C2H7g12095 | CX7g046424 | LOC_Os04g25280 | - | - | Detail |
| C1H4g16599 | 4:21,915,279-21,919,332 | + | C2H4g04819 | CX4g031486 | LOC_Os04g42430 | Os04g0502900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g011893 | 11:2,910,353-2,910,505 | + | - | - | - | - | - | Detail |
| CX11g012606 | 11:2,912,849-2,913,001 | - | - | C2H6g20372 | LOC_Os05g42448 | Os11g0631825 | - | Detail |
| CX11g011009 | 11:2,918,460-2,921,186 | - | C1H11g21973 | C2H11g20553 | LOC_Os11g07020 | Os11g0171300 | - | Detail |
| CX11g012638 | 11:2,922,855-2,924,318 | - | C1H11g09155 | C2H11g00926 | LOC_Os11g07030 | Os11g0171400 | - | Detail |
| CX11g013844 | 11:2,925,122-2,928,719 | - | C1H11g09618 | C2H11g09510 | LOC_Os11g07040 | Os11g0171500 | CDPK24, OsCDPK14, OsCPK24 | Detail |
| CX11g011467 | 11:2,937,367-2,942,868 | - | C1H11g05971 | C2H11g07786 | LOC_Os11g07050 | Os11g0171700 | - | Detail |
| CX11g013185 | 11:2,951,071-2,951,457 | - | - | - | - | - | - | Detail |
| CX11g011765 | 11:3,029,008-3,034,102 | - | C1H11g02629 | C2H11g19373 | LOC_Os11g07280 | Os11g0174000 | - | Detail |
| CX11g011155 | 11:3,047,122-3,049,073 | + | C1H11g31181 | C2H11g24285 | LOC_Os04g23360 | - | - | Detail |
| CX11g014626 | 11:3,050,614-3,051,327 | + | C1H11g04650 | C2H11g00986 | LOC_Os04g23360 | - | - | Detail |
| CX11g015023 | 11:3,055,358-3,055,969 | - | - | - | LOC_Os11g09000 | - | - | Detail |
| CX11g013683 | 11:3,075,813-3,076,103 | + | C1H4g06341 | C2H2g20826 | - | - | - | Detail |
| CX11g013244 | 11:3,111,470-3,111,635 | + | - | C2H10g21055 | - | Os12g0166700 | - | Detail |
| CX11g012505 | 11:3,127,605-3,128,933 | - | C1H11g28523 | - | LOC_Os11g07460 | Os11g0175700 | - | Detail |
| CX11g014611 | 11:3,142,158-3,148,121 | - | C1H11g03933 | C2H11g00817 | LOC_Os11g07470 | Os11g0175900 | - | Detail |
| CX11g013960 | 11:3,148,269-3,153,525 | + | C1H11g30405 | C2H11g10041 | LOC_Os11g07480 | Os11g0176000 | - | Detail |
| CX11g010966 | 11:3,155,787-3,160,238 | + | C1H11g27581 | C2H11g12301 | LOC_Os11g07490 | Os11g0176100 | - | Detail |
| CX11g013684 | 11:3,161,440-3,168,046 | - | C1H11g15711 | C2H11g27078 | LOC_Os11g07500 | Os11g0176200 | - | Detail |
| CX11g011190 | 11:3,168,560-3,172,453 | + | C1H11g17910 | C2H11g23623 | LOC_Os11g07510 | Os11g0176300 | - | Detail |
| CX11g012523 | 11:3,187,887-3,188,276 | - | C1H11g02697 | - | LOC_Os11g07580 | Os11g0177200 | - | Detail |