| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g04411 | 1:26,701,204-26,701,761 | - | - | CX1g006419 | - | - | - | Detail |
| C1H1g16623 | 1:26,705,473-26,710,158 | + | C2H1g03035 | CX1g004013 | LOC_Os01g52010 | Os01g0717700 | - | Detail |
| C1H1g02696 | 1:26,745,461-26,749,361 | - | C2H1g25952 | CX1g002595 | LOC_Os01g52050 | Os01g0718300 | - | Detail |
| C1H1g14248 | 1:26,755,799-26,756,127 | + | C2H1g19010 | CX1g003113 | LOC_Os01g52060 | Os01g0718500 | - | Detail |
| C1H1g23869 | 1:26,761,870-26,762,919 | + | C2H1g25740 | CX1g004561 | LOC_Os01g52070 | Os01g0718700 | - | Detail |
| C1H1g04168 | 1:26,764,466-26,766,230 | + | C2H1g25740 | CX1g004561 | LOC_Os01g52070 | Os01g0718700 | - | Detail |
| C1H1g28082 | 1:26,780,772-26,781,673 | + | C2H1g24505 | CX1g002233 | LOC_Os01g52100 | Os01g0719000 | - | Detail |
| C1H1g06605 | 1:26,783,889-26,789,508 | - | C2H1g11421 | CX1g000580 | LOC_Os01g52110 | Os01g0719100 | OsRZFP34, OsRFP1 | Detail |
| C1H1g27416 | 1:26,806,051-26,811,215 | + | C2H1g16157 | CX1g004024 | LOC_Os01g52130 | Os01g0719300 | OsSULTR3;6 | Detail |
| C1H1g30372 | 1:26,814,306-26,820,985 | + | C2H1g04500 | CX1g005204 | LOC_Os01g52140 | Os01g0719400 | - | Detail |
| C1H1g18944 | 1:26,825,034-26,827,060 | + | C2H1g02109 | CX1g003039 | LOC_Os01g52160 | Os01g0719600 | - | Detail |
| C1H1g29948 | 1:26,829,726-26,833,401 | + | C2H1g21306 | CX1g005692 | LOC_Os01g52170 | Os01g0719700 | - | Detail |
| C1H1g29733 | 1:26,835,613-26,836,575 | + | C2H1g12535 | CX1g006540 | LOC_Os01g52180 | Os01g0719900 | - | Detail |
| C1H1g20732 | 1:26,837,335-26,841,105 | - | C2H1g22549 | CX1g004595 | LOC_Os01g52190 | Os01g0720000 | - | Detail |
| C1H1g14278 | 1:26,842,263-26,843,326 | - | C2H1g08396 | CX1g005572 | LOC_Os01g52214 | Os01g0720300 | - | Detail |
| C1H1g29269 | 1:26,844,348-26,844,800 | - | C2H1g00446 | CX1g005572 | LOC_Os01g52214 | Os01g0720300 | - | Detail |
| C1H1g31092 | 1:26,853,305-26,863,251 | - | C2H1g27768 | CX1g006085 | LOC_Os01g52250 | Os01g0720600 | SSIVA, OsSSIVa, SSIV-1 | Detail |
| C1H1g09046 | 1:26,869,391-26,873,606 | + | C2H1g16044 | CX1g006432 | LOC_Os01g52280 | Os01g0720800 | - | Detail |
| C1H1g19609 | 1:26,881,322-26,895,433 | + | C2H1g14542 | CX1g000877 | LOC_Os01g52330 | Os01g0721500 | - | Detail |
| C1H1g20609 | 1:26,896,943-26,898,433 | + | C2H1g14542 | CX1g000877 | LOC_Os01g52330 | Os01g0721500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX11g011893 | 11:2,910,353-2,910,505 | + | - | - | - | - | - | Detail |
| CX11g012606 | 11:2,912,849-2,913,001 | - | - | C2H6g20372 | LOC_Os05g42448 | Os11g0631825 | - | Detail |
| CX11g011009 | 11:2,918,460-2,921,186 | - | C1H11g21973 | C2H11g20553 | LOC_Os11g07020 | Os11g0171300 | - | Detail |
| CX11g012638 | 11:2,922,855-2,924,318 | - | C1H11g09155 | C2H11g00926 | LOC_Os11g07030 | Os11g0171400 | - | Detail |
| CX11g013844 | 11:2,925,122-2,928,719 | - | C1H11g09618 | C2H11g09510 | LOC_Os11g07040 | Os11g0171500 | CDPK24, OsCDPK14, OsCPK24 | Detail |
| CX11g011467 | 11:2,937,367-2,942,868 | - | C1H11g05971 | C2H11g07786 | LOC_Os11g07050 | Os11g0171700 | - | Detail |
| CX11g013185 | 11:2,951,071-2,951,457 | - | - | - | - | - | - | Detail |
| CX11g011765 | 11:3,029,008-3,034,102 | - | C1H11g02629 | C2H11g19373 | LOC_Os11g07280 | Os11g0174000 | - | Detail |
| CX11g011155 | 11:3,047,122-3,049,073 | + | C1H11g31181 | C2H11g24285 | LOC_Os04g23360 | - | - | Detail |
| CX11g014626 | 11:3,050,614-3,051,327 | + | C1H11g04650 | C2H11g00986 | LOC_Os04g23360 | - | - | Detail |
| CX11g015023 | 11:3,055,358-3,055,969 | - | - | - | LOC_Os11g09000 | - | - | Detail |
| CX11g013683 | 11:3,075,813-3,076,103 | + | C1H4g06341 | C2H2g20826 | - | - | - | Detail |
| CX11g013244 | 11:3,111,470-3,111,635 | + | - | C2H10g21055 | - | Os12g0166700 | - | Detail |
| CX11g012505 | 11:3,127,605-3,128,933 | - | C1H11g28523 | - | LOC_Os11g07460 | Os11g0175700 | - | Detail |
| CX11g014611 | 11:3,142,158-3,148,121 | - | C1H11g03933 | C2H11g00817 | LOC_Os11g07470 | Os11g0175900 | - | Detail |
| CX11g013960 | 11:3,148,269-3,153,525 | + | C1H11g30405 | C2H11g10041 | LOC_Os11g07480 | Os11g0176000 | - | Detail |
| CX11g010966 | 11:3,155,787-3,160,238 | + | C1H11g27581 | C2H11g12301 | LOC_Os11g07490 | Os11g0176100 | - | Detail |
| CX11g013684 | 11:3,161,440-3,168,046 | - | C1H11g15711 | C2H11g27078 | LOC_Os11g07500 | Os11g0176200 | - | Detail |
| CX11g011190 | 11:3,168,560-3,172,453 | + | C1H11g17910 | C2H11g23623 | LOC_Os11g07510 | Os11g0176300 | - | Detail |
| CX11g012523 | 11:3,187,887-3,188,276 | - | C1H11g02697 | - | LOC_Os11g07580 | Os11g0177200 | - | Detail |